RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
LETMD1-225ENST00000550715 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
LETMD1-225ENST00000550715 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
LETMD1-225ENST00000550715 WDR62O43379 1518 aa15.38■□□□□ 0.05
LETMD1-225ENST00000550715 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
LETMD1-225ENST00000550715 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
LETMD1-225ENST00000550715 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
LETMD1-225ENST00000550715 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
LETMD1-225ENST00000550715 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
LETMD1-225ENST00000550715 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
LETMD1-225ENST00000550715 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
LETMD1-225ENST00000550715 MIER1Q8N108 512 aa15.26■□□□□ 0.03
LETMD1-225ENST00000550715 SPOCK2Q92563 424 aa15.22■□□□□ 0.03
LETMD1-225ENST00000550715 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
LETMD1-225ENST00000550715 SLC24A1O60721 1099 aa15.19■□□□□ 0.02
LETMD1-225ENST00000550715 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
LETMD1-225ENST00000550715 PKD2Q13563 968 aa15.17■□□□□ 0.02
LETMD1-225ENST00000550715 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
LETMD1-225ENST00000550715 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
LETMD1-225ENST00000550715 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
LETMD1-225ENST00000550715 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
LETMD1-225ENST00000550715 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
LETMD1-225ENST00000550715 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
LETMD1-225ENST00000550715 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
LETMD1-225ENST00000550715 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
LETMD1-225ENST00000550715 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
LETMD1-225ENST00000550715 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
LETMD1-225ENST00000550715 ZBTB47Q9UFB7 747 aaPredicted RBP15.03■□□□□ -0
LETMD1-225ENST00000550715 ECM2O94769 699 aaPredicted RBP15.01□□□□□ -0.01
LETMD1-225ENST00000550715 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
LETMD1-225ENST00000550715 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.01
LETMD1-225ENST00000550715 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
LETMD1-225ENST00000550715 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
LETMD1-225ENST00000550715 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
LETMD1-225ENST00000550715 CFTRP13569 1480 aa14.91□□□□□ -0.02
LETMD1-225ENST00000550715 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
LETMD1-225ENST00000550715 CHD1O14646 1710 aa14.88□□□□□ -0.03
LETMD1-225ENST00000550715 RGL2O15211 777 aa14.87□□□□□ -0.03
LETMD1-225ENST00000550715 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.038e-7■□□□□ 10.8
LETMD1-225ENST00000550715 KDM4FA0A1W2PPD8 638 aa14.83□□□□□ -0.04
LETMD1-225ENST00000550715 NUBP1P53384 320 aa14.82□□□□□ -0.04
LETMD1-225ENST00000550715 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
LETMD1-225ENST00000550715 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
LETMD1-225ENST00000550715 WIZO95785 1651 aa14.77□□□□□ -0.04
LETMD1-225ENST00000550715 PLCB2Q00722 1185 aa14.77□□□□□ -0.05
LETMD1-225ENST00000550715 GSE1Q14687 1217 aa14.74□□□□□ -0.05
LETMD1-225ENST00000550715 DCAF8Q5TAQ9 597 aa14.74□□□□□ -0.05
LETMD1-225ENST00000550715 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
LETMD1-225ENST00000550715 CHADLQ6NUI6 762 aa14.73□□□□□ -0.05
LETMD1-225ENST00000550715 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
LETMD1-225ENST00000550715 RASEFQ8IZ41 740 aa14.7□□□□□ -0.06
LETMD1-225ENST00000550715 FAM212AQ96EL1 285 aa14.7□□□□□ -0.06
LETMD1-225ENST00000550715 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
LETMD1-225ENST00000550715 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
LETMD1-225ENST00000550715 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
LETMD1-225ENST00000550715 RNF25Q96BH1 459 aaPredicted RBP14.65□□□□□ -0.06
LETMD1-225ENST00000550715 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
LETMD1-225ENST00000550715 TDRD9Q8NDG6 1382 aaKnown RBP14.63□□□□□ -0.07
LETMD1-225ENST00000550715 HAP1P54257 671 aaPredicted RBP14.63□□□□□ -0.07
LETMD1-225ENST00000550715 CHGAP10645 457 aaKnown RBP14.62□□□□□ -0.07
LETMD1-225ENST00000550715 BBXQ8WY36 941 aaPredicted RBP14.62□□□□□ -0.07
LETMD1-225ENST00000550715 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.59□□□□□ -0.07
LETMD1-225ENST00000550715 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
LETMD1-225ENST00000550715 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
LETMD1-225ENST00000550715 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
LETMD1-225ENST00000550715 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
LETMD1-225ENST00000550715 FARP1Q9Y4F1 1045 aaPredicted RBP14.55□□□□□ -0.08
LETMD1-225ENST00000550715 RAD54L2Q9Y4B4 1467 aa14.55□□□□□ -0.08
LETMD1-225ENST00000550715 PAXIP1Q6ZW49 1069 aaPredicted RBP14.54□□□□□ -0.08
LETMD1-225ENST00000550715 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
LETMD1-225ENST00000550715 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
LETMD1-225ENST00000550715 RIOK3O14730 519 aaKnown RBP14.53□□□□□ -0.08
LETMD1-225ENST00000550715 PYGBP11216 843 aa14.53□□□□□ -0.08
LETMD1-225ENST00000550715 CFAP44Q96MT7 982 aa14.53□□□□□ -0.08
LETMD1-225ENST00000550715 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.08
LETMD1-225ENST00000550715 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
LETMD1-225ENST00000550715 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
LETMD1-225ENST00000550715 FAM69CQ0P6D2 419 aa14.51□□□□□ -0.09
LETMD1-225ENST00000550715 TSPYL2Q9H2G4 693 aaPredicted RBP14.51□□□□□ -0.09
LETMD1-225ENST00000550715 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
LETMD1-225ENST00000550715 ERCC6L2Q5T890 1561 aa14.51□□□□□ -0.09
LETMD1-225ENST00000550715 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
LETMD1-225ENST00000550715 HS6ST3Q8IZP7 471 aa14.49□□□□□ -0.09
LETMD1-225ENST00000550715 SOGA1O94964 1423 aa14.49□□□□□ -0.09
LETMD1-225ENST00000550715 CHRM1P11229 460 aaPredicted RBP14.46□□□□□ -0.09
LETMD1-225ENST00000550715 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
LETMD1-225ENST00000550715 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
LETMD1-225ENST00000550715 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
LETMD1-225ENST00000550715 PIP4P2Q8N4L2 257 aa14.44□□□□□ -0.1
LETMD1-225ENST00000550715 HECW2Q9P2P5 1572 aa14.43□□□□□ -0.1
LETMD1-225ENST00000550715 VGFO15240 615 aaPredicted RBP14.41□□□□□ -0.1
LETMD1-225ENST00000550715 SPRYD3Q8NCJ5 442 aa14.41□□□□□ -0.1
LETMD1-225ENST00000550715 TAOK2Q9UL54 1235 aa14.41□□□□□ -0.1
LETMD1-225ENST00000550715 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
LETMD1-225ENST00000550715 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
LETMD1-225ENST00000550715 LMTK3Q96Q04 1460 aa14.39□□□□□ -0.11
LETMD1-225ENST00000550715 STK25O00506 426 aa14.39□□□□□ -0.11
LETMD1-225ENST00000550715 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
LETMD1-225ENST00000550715 ILDR2Q71H61 639 aa14.37□□□□□ -0.11
LETMD1-225ENST00000550715 KDM6BO15054 1643 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms