RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 MAP7D2Q96T17 732 aa11.54□□□□□ -0.56
PPFIA2-220ENST00000550584 CHAF1AQ13111 956 aaPredicted RBP11.53□□□□□ -0.56
PPFIA2-220ENST00000550584 MTERF4Q7Z6M4 381 aaKnown RBP11.53□□□□□ -0.56
PPFIA2-220ENST00000550584 IPO9Q96P70 1041 aaKnown RBP11.52□□□□□ -0.57
PPFIA2-220ENST00000550584 CCER2I3L3R5 266 aa11.51□□□□□ -0.57
PPFIA2-220ENST00000550584 DNTTIP2Q5QJE6 756 aaKnown RBP11.5□□□□□ -0.57
PPFIA2-220ENST00000550584 PTMAP06454 111 aaKnown RBP11.49□□□□□ -0.57
PPFIA2-220ENST00000550584 TNNT3P45378 269 aaPredicted RBP11.49□□□□□ -0.57
PPFIA2-220ENST00000550584 CALRP27797 417 aaKnown RBP11.46□□□□□ -0.57
PPFIA2-220ENST00000550584 GOLGA6L3A6NEY3 463 aa11.44□□□□□ -0.58
PPFIA2-220ENST00000550584 DDX10Q13206 875 aaKnown RBP11.44□□□□□ -0.58
PPFIA2-220ENST00000550584 TRIM52Q96A61 297 aa11.44□□□□□ -0.58
PPFIA2-220ENST00000550584 TCERG1O14776 1098 aaKnown RBP11.44□□□□□ -0.58
PPFIA2-220ENST00000550584 TONSLQ96HA7 1378 aa11.43□□□□□ -0.58
PPFIA2-220ENST00000550584 TPM2P07951 284 aa11.42□□□□□ -0.58
PPFIA2-220ENST00000550584 GSE1Q14687 1217 aa11.42□□□□□ -0.58
PPFIA2-220ENST00000550584 RRP9O43818 475 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-220ENST00000550584 A0A0U1RQG5 324 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-220ENST00000550584 TAF3Q5VWG9 929 aa11.41□□□□□ -0.58
PPFIA2-220ENST00000550584 EEA1Q15075 1411 aa11.4□□□□□ -0.58
PPFIA2-220ENST00000550584 FAM43AQ8N2R8 423 aa11.4□□□□□ -0.58
PPFIA2-220ENST00000550584 GOLGA6L6A8MZA4 724 aa11.4□□□□□ -0.58
PPFIA2-220ENST00000550584 ARXQ96QS3 562 aa11.38□□□□□ -0.59
PPFIA2-220ENST00000550584 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
PPFIA2-220ENST00000550584 MRS2Q9HD23 443 aa11.36□□□□□ -0.59
PPFIA2-220ENST00000550584 FAM50AQ14320 339 aaKnown RBP11.36□□□□□ -0.59
PPFIA2-220ENST00000550584 FAM9BQ8IZU0 186 aa11.36□□□□□ -0.59
PPFIA2-220ENST00000550584 NRDCO43847 1150 aa11.35□□□□□ -0.59
PPFIA2-220ENST00000550584 CFAP44Q96MT7 982 aa11.34□□□□□ -0.59
PPFIA2-220ENST00000550584 TIMELESSQ9UNS1 1208 aa11.34□□□□□ -0.59
PPFIA2-220ENST00000550584 KIAA2012Q0VF49 1180 aa11.34□□□□□ -0.59
PPFIA2-220ENST00000550584 CSPP1Q1MSJ5 1256 aa11.34□□□□□ -0.59
PPFIA2-220ENST00000550584 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.33□□□□□ -0.6
PPFIA2-220ENST00000550584 GBP4Q96PP9 640 aa11.32□□□□□ -0.6
PPFIA2-220ENST00000550584 APPP05067 770 aa11.32□□□□□ -0.6
PPFIA2-220ENST00000550584 TMC1Q8TDI8 760 aa11.32□□□□□ -0.6
PPFIA2-220ENST00000550584 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
PPFIA2-220ENST00000550584 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
PPFIA2-220ENST00000550584 PDE4CQ08493 712 aa11.31□□□□□ -0.6
PPFIA2-220ENST00000550584 SETQ01105 290 aaPredicted RBP11.3□□□□□ -0.6
PPFIA2-220ENST00000550584 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
PPFIA2-220ENST00000550584 CCDC66A2RUB6 948 aa11.28□□□□□ -0.6
PPFIA2-220ENST00000550584 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
PPFIA2-220ENST00000550584 SALL2Q9Y467 1007 aaPredicted RBP11.27□□□□□ -0.6
PPFIA2-220ENST00000550584 HSCBQ8IWL3 235 aa11.26□□□□□ -0.61
PPFIA2-220ENST00000550584 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
PPFIA2-220ENST00000550584 SKOR2Q2VWA4 1001 aaPredicted RBP11.26□□□□□ -0.61
PPFIA2-220ENST00000550584 ABCC9O60706 1549 aa11.26□□□□□ -0.61
PPFIA2-220ENST00000550584 TSPYL1Q9H0U9 437 aa11.25□□□□□ -0.61
PPFIA2-220ENST00000550584 NOM1Q5C9Z4 860 aaKnown RBP11.24□□□□□ -0.61
PPFIA2-220ENST00000550584 MS4A1P11836 297 aa11.23□□□□□ -0.61
PPFIA2-220ENST00000550584 SYAP1Q96A49 352 aaPredicted RBP11.23□□□□□ -0.61
PPFIA2-220ENST00000550584 CASC1Q6TDU7 716 aa11.22□□□□□ -0.61
PPFIA2-220ENST00000550584 ZNF771Q7L3S4 317 aaPredicted RBP11.22□□□□□ -0.61
PPFIA2-220ENST00000550584 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
PPFIA2-220ENST00000550584 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
PPFIA2-220ENST00000550584 ISY1Q9ULR0 285 aaKnown RBP11.21□□□□□ -0.61
PPFIA2-220ENST00000550584 HSP90AB1P08238 724 aaKnown RBP11.21□□□□□ -0.62
PPFIA2-220ENST00000550584 CHMP4BQ9H444 224 aaKnown RBP11.21□□□□□ -0.62
PPFIA2-220ENST00000550584 AMER1Q5JTC6 1135 aaPredicted RBP11.18□□□□□ -0.62
PPFIA2-220ENST00000550584 WDR43Q15061 677 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPFIA2-220ENST00000550584 TEX35Q5T0J7 233 aa11.18□□□□□ -0.62
PPFIA2-220ENST00000550584 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
PPFIA2-220ENST00000550584 ZRSR1Q15695 479 aaKnown RBP11.17□□□□□ -0.62
PPFIA2-220ENST00000550584 TAF7LQ5H9L4 462 aa11.15□□□□□ -0.62
PPFIA2-220ENST00000550584 CWC15Q9P013 229 aaKnown RBP11.15□□□□□ -0.62
PPFIA2-220ENST00000550584 PHF14O94880 888 aa11.15□□□□□ -0.62
PPFIA2-220ENST00000550584 GPS2Q13227 327 aa11.14□□□□□ -0.63
PPFIA2-220ENST00000550584 MRE11P49959 708 aa11.13□□□□□ -0.63
PPFIA2-220ENST00000550584 PDCL3Q9H2J4 239 aa11.13□□□□□ -0.63
PPFIA2-220ENST00000550584 ZMYND15Q9H091 742 aa11.1□□□□□ -0.63
PPFIA2-220ENST00000550584 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
PPFIA2-220ENST00000550584 HMGN5P82970 282 aaKnown RBP11.1□□□□□ -0.63
PPFIA2-220ENST00000550584 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
PPFIA2-220ENST00000550584 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-220ENST00000550584 FAM13BQ9NYF5 915 aa11.08□□□□□ -0.64
PPFIA2-220ENST00000550584 DIAPH3Q9NSV4 1193 aa11.07□□□□□ -0.64
PPFIA2-220ENST00000550584 TPM3P06753 285 aa11.07□□□□□ -0.64
PPFIA2-220ENST00000550584 TNIKQ9UKE5 1360 aa11.07□□□□□ -0.64
PPFIA2-220ENST00000550584 PDE3BQ13370 1112 aa11.06□□□□□ -0.64
PPFIA2-220ENST00000550584 NUDCQ9Y266 331 aa11.06□□□□□ -0.64
PPFIA2-220ENST00000550584 CALD1Q05682 793 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-220ENST00000550584 IL27Q8NEV9 243 aa11.06□□□□□ -0.64
PPFIA2-220ENST00000550584 GOLGA3Q08378 1498 aa11.05□□□□□ -0.64
PPFIA2-220ENST00000550584 PDE4AP27815 886 aa11.05□□□□□ -0.64
PPFIA2-220ENST00000550584 CEP162Q5TB80 1403 aa11.05□□□□□ -0.64
PPFIA2-220ENST00000550584 DRC7Q8IY82 874 aa11.04□□□□□ -0.64
PPFIA2-220ENST00000550584 CCDC39Q9UFE4 941 aa11.04□□□□□ -0.64
PPFIA2-220ENST00000550584 FAM161AQ3B820 660 aa11.04□□□□□ -0.64
PPFIA2-220ENST00000550584 CCDC173Q0VFZ6 552 aa11.03□□□□□ -0.64
PPFIA2-220ENST00000550584 PDCL2Q8N4E4 241 aa11.03□□□□□ -0.64
PPFIA2-220ENST00000550584 KIF3AQ9Y496 699 aa11.03□□□□□ -0.64
PPFIA2-220ENST00000550584 NFKBIBQ15653 356 aa11.02□□□□□ -0.65
PPFIA2-220ENST00000550584 CLIP1P30622 1438 aa11.01□□□□□ -0.65
PPFIA2-220ENST00000550584 RGS3P49796 1198 aa11.01□□□□□ -0.65
PPFIA2-220ENST00000550584 USP8P40818 1118 aa11.01□□□□□ -0.65
PPFIA2-220ENST00000550584 MCCP23508 829 aa11.01□□□□□ -0.65
PPFIA2-220ENST00000550584 FRAT1Q92837 279 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-220ENST00000550584 PLCB2Q00722 1185 aa11□□□□□ -0.65
PPFIA2-220ENST00000550584 CENPQQ7L2Z9 268 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms