RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 EEA1Q15075 1411 aa37.58■■■■□ 3.61
BRF1-216ENST00000550208 PRXQ9BXM0 1461 aa37.52■■■■□ 3.6
BRF1-216ENST00000550208 JPH4Q96JJ6 628 aa37.5■■■■□ 3.59
BRF1-216ENST00000550208 KIAA0586Q9BVV6 1533 aa37.47■■■■□ 3.59
BRF1-216ENST00000550208 SHROOM2Q13796 1616 aa37.4■■■■□ 3.58
BRF1-216ENST00000550208 CYB5RLQ6IPT4 315 aa37.4■■■■□ 3.58
BRF1-216ENST00000550208 ERCC6L2Q5T890 1561 aa37.36■■■■□ 3.57
BRF1-216ENST00000550208 PRG4Q92954 1404 aaPredicted RBP37.35■■■■□ 3.57
BRF1-216ENST00000550208 ARAP1Q96P48 1450 aa37.34■■■■□ 3.57
BRF1-216ENST00000550208 IQGAP2Q13576 1575 aa37.25■■■■□ 3.55
BRF1-216ENST00000550208 EHMT2Q96KQ7 1210 aa37.17■■■■□ 3.54
BRF1-216ENST00000550208 KIF21BO75037 1637 aa37.15■■■■□ 3.54
BRF1-216ENST00000550208 CTTNBP2Q8WZ74 1663 aa37.14■■■■□ 3.54
BRF1-216ENST00000550208 UGGT2Q9NYU1 1516 aa37.07■■■■□ 3.53
BRF1-216ENST00000550208 CARMIL2Q6F5E8 1435 aa37.06■■■■□ 3.52
BRF1-216ENST00000550208 DISP1Q96F81 1524 aa37.03■■■■□ 3.52
BRF1-216ENST00000550208 UBTFP17480 764 aaKnown RBP37.01■■■■□ 3.52
BRF1-216ENST00000550208 TTBK1Q5TCY1 1321 aaPredicted RBP36.99■■■■□ 3.51
BRF1-216ENST00000550208 GOLGA3Q08378 1498 aa36.99■■■■□ 3.51
BRF1-216ENST00000550208 TNIKQ9UKE5 1360 aa36.96■■■■□ 3.51
BRF1-216ENST00000550208 PTPRGP23470 1445 aa36.94■■■■□ 3.5
BRF1-216ENST00000550208 RANGAP1P46060 587 aaPredicted RBP36.93■■■■□ 3.5
BRF1-216ENST00000550208 KIAA0556O60303 1618 aa36.88■■■■□ 3.5
BRF1-216ENST00000550208 P3H3Q8IVL6 736 aa36.86■■■■□ 3.49
BRF1-216ENST00000550208 SAMD9Q5K651 1589 aa36.71■■■■□ 3.47
BRF1-216ENST00000550208 ADCY10Q96PN6 1610 aa36.68■■■■□ 3.46
BRF1-216ENST00000550208 UACAQ9BZF9 1416 aa36.67■■■■□ 3.46
BRF1-216ENST00000550208 NPM1P06748 294 aaKnown RBP eCLIP36.66■■■■□ 3.46
BRF1-216ENST00000550208 LOC105371045A0A1W2PR82 267 aa36.61■■■■□ 3.45
BRF1-216ENST00000550208 FHOD3Q2V2M9 1422 aa36.59■■■■□ 3.45
BRF1-216ENST00000550208 UHRF1BP1LA0JNW5 1464 aa36.59■■■■□ 3.45
BRF1-216ENST00000550208 PLB1Q6P1J6 1458 aa36.58■■■■□ 3.45
BRF1-216ENST00000550208 EFCAB5A4FU69 1503 aa36.57■■■■□ 3.44
BRF1-216ENST00000550208 TRHP20396 242 aaPredicted RBP36.55■■■■□ 3.44
BRF1-216ENST00000550208 ABCC2Q92887 1545 aa36.54■■■■□ 3.44
BRF1-216ENST00000550208 ARHGAP35Q9NRY4 1499 aa36.51■■■■□ 3.44
BRF1-216ENST00000550208 ABCA8O94911 1581 aa36.5■■■■□ 3.43
BRF1-216ENST00000550208 KDM5BQ9UGL1 1544 aa36.42■■■■□ 3.42
BRF1-216ENST00000550208 MAPKBP1O60336 1514 aa36.38■■■■□ 3.41
BRF1-216ENST00000550208 CLIP1P30622 1438 aa36.37■■■■□ 3.41
BRF1-216ENST00000550208 ARID3CA6NKF2 412 aa36.37■■■■□ 3.41
BRF1-216ENST00000550208 RAPGEF6Q8TEU7 1601 aa36.34■■■■□ 3.41
BRF1-216ENST00000550208 ZCCHC11Q5TAX3 1644 aaKnown RBP36.32■■■■□ 3.4
BRF1-216ENST00000550208 ASXL2Q76L83 1435 aa36.3■■■■□ 3.4
BRF1-216ENST00000550208 FMN1Q68DA7 1419 aa36.28■■■■□ 3.4
BRF1-216ENST00000550208 ATP10BO94823 1461 aa36.27■■■■□ 3.4
BRF1-216ENST00000550208 FAM69CQ0P6D2 419 aa36.26■■■■□ 3.4
BRF1-216ENST00000550208 CEP162Q5TB80 1403 aa36.25■■■■□ 3.39
BRF1-216ENST00000550208 NUP153P49790 1475 aaKnown RBP36.24■■■■□ 3.39
BRF1-216ENST00000550208 ABCC10Q5T3U5 1492 aa36.24■■■■□ 3.39
BRF1-216ENST00000550208 ATP1B4Q9UN42 357 aaPredicted RBP36.22■■■■□ 3.39
BRF1-216ENST00000550208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.2■■■■□ 3.39
BRF1-216ENST00000550208 HNRNPUL2Q1KMD3 747 aaKnown RBP36.2■■■■□ 3.39
BRF1-216ENST00000550208 KIF13AQ9H1H9 1805 aa36.16■■■■□ 3.38
BRF1-216ENST00000550208 DIP2BQ9P265 1576 aa36.14■■■■□ 3.38
BRF1-216ENST00000550208 KCNH8Q96L42 1107 aa36.12■■■■□ 3.37
BRF1-216ENST00000550208 WDR7Q9Y4E6 1490 aa36.11■■■■□ 3.37
BRF1-216ENST00000550208 EPRSP07814 1512 aaKnown RBP36.07■■■■□ 3.36
BRF1-216ENST00000550208 CASKIN1Q8WXD9 1431 aa36.05■■■■□ 3.36
BRF1-216ENST00000550208 HECW1Q76N89 1606 aa36.03■■■■□ 3.36
BRF1-216ENST00000550208 PLEKHD1A6NEE1 506 aa36.02■■■■□ 3.36
BRF1-216ENST00000550208 CDK13Q14004 1512 aaKnown RBP36.02■■■■□ 3.36
BRF1-216ENST00000550208 GLI2P10070 1586 aa36■■■■□ 3.35
BRF1-216ENST00000550208 PCF11O94913 1555 aaKnown RBP35.99■■■■□ 3.35
BRF1-216ENST00000550208 FYCO1Q9BQS8 1478 aa35.92■■■■□ 3.34
BRF1-216ENST00000550208 LRRIQ1Q96JM4 1722 aa35.91■■■■□ 3.34
BRF1-216ENST00000550208 TSPOAP1O95153 1857 aa35.89■■■■□ 3.34
BRF1-216ENST00000550208 CDK11AQ9UQ88 783 aaPredicted RBP35.88■■■■□ 3.33
BRF1-216ENST00000550208 MAP3K4Q9Y6R4 1608 aa35.83■■■■□ 3.33
BRF1-216ENST00000550208 CCDC18Q5T9S5 1454 aa35.82■■■■□ 3.32
BRF1-216ENST00000550208 CD109Q6YHK3 1445 aa35.82■■■■□ 3.32
BRF1-216ENST00000550208 VPS8Q8N3P4 1428 aa35.78■■■■□ 3.32
BRF1-216ENST00000550208 PPRC1Q5VV67 1664 aaKnown RBP35.76■■■■□ 3.32
BRF1-216ENST00000550208 CFAP43Q8NDM7 1665 aa35.75■■■■□ 3.31
BRF1-216ENST00000550208 TROQ12816 1431 aaPredicted RBP35.73■■■■□ 3.31
BRF1-216ENST00000550208 ABCA9Q8IUA7 1624 aa35.72■■■■□ 3.31
BRF1-216ENST00000550208 MAGI3Q5TCQ9 1506 aa35.67■■■■□ 3.3
BRF1-216ENST00000550208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.67■■■■□ 3.32e-7■■■□□ 19.1
BRF1-216ENST00000550208 TEX14Q8IWB6 1497 aa35.65■■■■□ 3.3
BRF1-216ENST00000550208 KIF14Q15058 1648 aa35.61■■■■□ 3.29
BRF1-216ENST00000550208 TTC37Q6PGP7 1564 aa35.59■■■■□ 3.29
BRF1-216ENST00000550208 MTUS2Q5JR59 1369 aa35.55■■■■□ 3.28
BRF1-216ENST00000550208 COL17A1Q9UMD9 1497 aaPredicted RBP35.52■■■■□ 3.28
BRF1-216ENST00000550208 KDM6BO15054 1643 aa35.51■■■■□ 3.28
BRF1-216ENST00000550208 PLCH2O75038 1416 aa35.49■■■■□ 3.27
BRF1-216ENST00000550208 TIAM1Q13009 1591 aa35.49■■■■□ 3.27
BRF1-216ENST00000550208 APLP2Q06481 763 aa35.44■■■■□ 3.26
BRF1-216ENST00000550208 KANK4Q5T7N3 995 aaPredicted RBP35.44■■■■□ 3.26
BRF1-216ENST00000550208 NEO1Q92859 1461 aa35.43■■■■□ 3.26
BRF1-216ENST00000550208 PHLDB1Q86UU1 1377 aa35.43■■■■□ 3.26
BRF1-216ENST00000550208 MAP3K1Q13233 1512 aa35.42■■■■□ 3.26
BRF1-216ENST00000550208 FANCAO15360 1455 aa35.41■■■■□ 3.26
BRF1-216ENST00000550208 EFCAB2Q5VUJ9 269 aa35.41■■■■□ 3.26
BRF1-216ENST00000550208 EHBP1L1Q8N3D4 1523 aa35.41■■■■□ 3.26
BRF1-216ENST00000550208 MYO5CQ9NQX4 1742 aa35.4■■■■□ 3.26
BRF1-216ENST00000550208 AKNAQ7Z591 1439 aa35.4■■■■□ 3.26
BRF1-216ENST00000550208 ARAP3Q8WWN8 1544 aa35.37■■■■□ 3.25
BRF1-216ENST00000550208 LRRC9Q6ZRR7 1453 aa35.37■■■■□ 3.25
BRF1-216ENST00000550208 ARHGAP5Q13017 1502 aa35.32■■■■□ 3.25
BRF1-216ENST00000550208 GPATCH8Q9UKJ3 1502 aaKnown RBP35.32■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms