RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, human

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A1-208	ENST00000550173	RUSC2	Q8N2Y8	1516 aa		34.6	■■■■□ 3.13
SLC38A1-208	ENST00000550173	CUL7	Q14999	1698 aa		34.54	■■■■□ 3.12
SLC38A1-208	ENST00000550173	KIAA0586	Q9BVV6	1533 aa		34.46	■■■■□ 3.11
SLC38A1-208	ENST00000550173	CARMIL1	Q5VZK9	1371 aa		34.4	■■■■□ 3.1
SLC38A1-208	ENST00000550173	NPM1	P06748	294 aa	Known RBP eCLIP	34.29	■■■■□ 3.08
SLC38A1-208	ENST00000550173	KIF13A	Q9H1H9	1805 aa		34.23	■■■■□ 3.07
SLC38A1-208	ENST00000550173	ADCY10	Q96PN6	1610 aa		34.22	■■■■□ 3.07
SLC38A1-208	ENST00000550173	IQGAP2	Q13576	1575 aa		34.15	■■■■□ 3.06
SLC38A1-208	ENST00000550173	PTPRG	P23470	1445 aa		34.14	■■■■□ 3.06
SLC38A1-208	ENST00000550173	CARMIL2	Q6F5E8	1435 aa		34.14	■■■■□ 3.06
SLC38A1-208	ENST00000550173	MAPKBP1	O60336	1514 aa		34.14	■■■■□ 3.06
SLC38A1-208	ENST00000550173	TTBK1	Q5TCY1	1321 aa	Predicted RBP	34.13	■■■■□ 3.05
SLC38A1-208	ENST00000550173	FAM69C	Q0P6D2	419 aa		34.12	■■■■□ 3.05
SLC38A1-208	ENST00000550173	ABCC10	Q5T3U5	1492 aa		34.11	■■■■□ 3.05
SLC38A1-208	ENST00000550173	RAPGEF2	Q9Y4G8	1499 aa		34.1	■■■■□ 3.05
SLC38A1-208	ENST00000550173	TNIK	Q9UKE5	1360 aa		34.09	■■■■□ 3.05
SLC38A1-208	ENST00000550173	DIP2B	Q9P265	1576 aa		34.02	■■■■□ 3.04
SLC38A1-208	ENST00000550173	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.97	■■■■□ 3.03
SLC38A1-208	ENST00000550173	DISP1	Q96F81	1524 aa		33.96	■■■■□ 3.03
SLC38A1-208	ENST00000550173	ABCC2	Q92887	1545 aa		33.92	■■■■□ 3.02
SLC38A1-208	ENST00000550173	UGGT2	Q9NYU1	1516 aa		33.92	■■■■□ 3.02
SLC38A1-208	ENST00000550173	UACA	Q9BZF9	1416 aa		33.87	■■■■□ 3.01
SLC38A1-208	ENST00000550173	UHRF1BP1L	A0JNW5	1464 aa		33.86	■■■■□ 3.01
SLC38A1-208	ENST00000550173	TSPOAP1	O95153	1857 aa		33.83	■■■■□ 3.01
SLC38A1-208	ENST00000550173	KIAA0556	O60303	1618 aa		33.82	■■■■□ 3.01
SLC38A1-208	ENST00000550173	CTTNBP2	Q8WZ74	1663 aa		33.8	■■■■□ 3
SLC38A1-208	ENST00000550173	ASXL2	Q76L83	1435 aa		33.8	■■■■□ 3
SLC38A1-208	ENST00000550173	PLB1	Q6P1J6	1458 aa		33.78	■■■■□ 3
SLC38A1-208	ENST00000550173	PRX	Q9BXM0	1461 aa		33.76	■■■□□ 2.99
SLC38A1-208	ENST00000550173	KDM6B	O15054	1643 aa		33.72	■■■□□ 2.99
SLC38A1-208	ENST00000550173	KDM5B	Q9UGL1	1544 aa		33.71	■■■□□ 2.99
SLC38A1-208	ENST00000550173	GOLGA3	Q08378	1498 aa		33.69	■■■□□ 2.98
SLC38A1-208	ENST00000550173	GLI2	P10070	1586 aa		33.67	■■■□□ 2.98
SLC38A1-208	ENST00000550173	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.64	■■■□□ 2.98
SLC38A1-208	ENST00000550173	EPRS	P07814	1512 aa	Known RBP	33.58	■■■□□ 2.97
SLC38A1-208	ENST00000550173	CSRNP3	Q8WYN3	585 aa		33.58	■■■□□ 2.97
SLC38A1-208	ENST00000550173	PPRC1	Q5VV67	1664 aa	Known RBP	33.56	■■■□□ 2.96
SLC38A1-208	ENST00000550173	ABCA8	O94911	1581 aa		33.51	■■■□□ 2.95
SLC38A1-208	ENST00000550173	MAP3K4	Q9Y6R4	1608 aa		33.49	■■■□□ 2.95
SLC38A1-208	ENST00000550173	WDR7	Q9Y4E6	1490 aa		33.48	■■■□□ 2.95
SLC38A1-208	ENST00000550173	P3H3	Q8IVL6	736 aa		33.45	■■■□□ 2.95
SLC38A1-208	ENST00000550173	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.45	■■■□□ 2.95
SLC38A1-208	ENST00000550173	EEA1	Q15075	1411 aa		33.43	■■■□□ 2.94
SLC38A1-208	ENST00000550173	TEX14	Q8IWB6	1497 aa		33.42	■■■□□ 2.94
SLC38A1-208	ENST00000550173	KCNH8	Q96L42	1107 aa		33.37	■■■□□ 2.93
SLC38A1-208	ENST00000550173	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.34	■■■□□ 2.93
SLC38A1-208	ENST00000550173	KDM4F	A0A1W2PPD8	638 aa		33.33	■■■□□ 2.93
SLC38A1-208	ENST00000550173	SAMD9	Q5K651	1589 aa		33.31	■■■□□ 2.92
SLC38A1-208	ENST00000550173	ARID3C	A6NKF2	412 aa		33.31	■■■□□ 2.92
SLC38A1-208	ENST00000550173	CD109	Q6YHK3	1445 aa		33.28	■■■□□ 2.92
SLC38A1-208	ENST00000550173	CFAP43	Q8NDM7	1665 aa		33.27	■■■□□ 2.92
SLC38A1-208	ENST00000550173	RANGAP1	P46060	587 aa	Predicted RBP	33.26	■■■□□ 2.91
SLC38A1-208	ENST00000550173	ATP10B	O94823	1461 aa		33.25	■■■□□ 2.91
SLC38A1-208	ENST00000550173	MAGI3	Q5TCQ9	1506 aa		33.23	■■■□□ 2.91
SLC38A1-208	ENST00000550173	RAPGEF6	Q8TEU7	1601 aa		33.19	■■■□□ 2.9
SLC38A1-208	ENST00000550173	KIF21B	O75037	1637 aa		33.13	■■■□□ 2.89
SLC38A1-208	ENST00000550173	FHOD3	Q2V2M9	1422 aa		33.13	■■■□□ 2.89
SLC38A1-208	ENST00000550173	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.13	■■■□□ 2.89
SLC38A1-208	ENST00000550173	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.13	■■■□□ 2.89
SLC38A1-208	ENST00000550173	ADGRL1	O94910	1474 aa		33.09	■■■□□ 2.89
SLC38A1-208	ENST00000550173	CHIC1	Q5VXU3	224 aa		33.06	■■■□□ 2.88
SLC38A1-208	ENST00000550173	NUP153	P49790	1475 aa	Known RBP	33.05	■■■□□ 2.88
SLC38A1-208	ENST00000550173	ABCA9	Q8IUA7	1624 aa		33.03	■■■□□ 2.88
SLC38A1-208	ENST00000550173	EHMT2	Q96KQ7	1210 aa		33.01	■■■□□ 2.87
SLC38A1-208	ENST00000550173	EFCAB5	A4FU69	1503 aa		33.01	■■■□□ 2.87
SLC38A1-208	ENST00000550173	UBTF	P17480	764 aa	Known RBP	32.97	■■■□□ 2.87
SLC38A1-208	ENST00000550173	ARAP3	Q8WWN8	1544 aa		32.97	■■■□□ 2.87
SLC38A1-208	ENST00000550173	PLEKHD1	A6NEE1	506 aa		32.93	■■■□□ 2.86
SLC38A1-208	ENST00000550173	PHLDB1	Q86UU1	1377 aa		32.92	■■■□□ 2.86
SLC38A1-208	ENST00000550173	NEO1	Q92859	1461 aa		32.86	■■■□□ 2.85
SLC38A1-208	ENST00000550173	RAPGEF3	O95398	923 aa		32.82	■■■□□ 2.84
SLC38A1-208	ENST00000550173	CDK13	Q14004	1512 aa	Known RBP	32.77	■■■□□ 2.84
SLC38A1-208	ENST00000550173	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.76	■■■□□ 2.83
SLC38A1-208	ENST00000550173	FMN1	Q68DA7	1419 aa		32.75	■■■□□ 2.83
SLC38A1-208	ENST00000550173	ARHGAP35	Q9NRY4	1499 aa		32.74	■■■□□ 2.83
SLC38A1-208	ENST00000550173	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.73	■■■□□ 2.83
SLC38A1-208	ENST00000550173	FRMPD1	Q5SYB0	1578 aa		32.69	■■■□□ 2.82
SLC38A1-208	ENST00000550173	TTC37	Q6PGP7	1564 aa		32.68	■■■□□ 2.82
SLC38A1-208	ENST00000550173	HECW1	Q76N89	1606 aa		32.68	■■■□□ 2.82
SLC38A1-208	ENST00000550173	AKNA	Q7Z591	1439 aa		32.68	■■■□□ 2.82
SLC38A1-208	ENST00000550173	FANCA	O15360	1455 aa		32.67	■■■□□ 2.82
SLC38A1-208	ENST00000550173	CFAP74	Q9C0B2	1584 aa		32.66	■■■□□ 2.82
SLC38A1-208	ENST00000550173	DENND4B	O75064	1496 aa	Predicted RBP	32.65	■■■□□ 2.82
SLC38A1-208	ENST00000550173	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.6	■■■□□ 2.81
SLC38A1-208	ENST00000550173	HECW2	Q9P2P5	1572 aa		32.6	■■■□□ 2.81
SLC38A1-208	ENST00000550173	RICTOR	Q6R327	1708 aa		32.59	■■■□□ 2.81
SLC38A1-208	ENST00000550173	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.57	■■■□□ 2.8
SLC38A1-208	ENST00000550173	PLCH2	O75038	1416 aa		32.54	■■■□□ 2.8
SLC38A1-208	ENST00000550173	ADAMTSL3	P82987	1691 aa		32.53	■■■□□ 2.8
SLC38A1-208	ENST00000550173	ARHGEF40	Q8TER5	1519 aa		32.51	■■■□□ 2.8
SLC38A1-208	ENST00000550173	BCORL1	Q5H9F3	1711 aa		32.48	■■■□□ 2.79
SLC38A1-208	ENST00000550173	TRO	Q12816	1431 aa	Predicted RBP	32.47	■■■□□ 2.79
SLC38A1-208	ENST00000550173	MYO5C	Q9NQX4	1742 aa		32.46	■■■□□ 2.79
SLC38A1-208	ENST00000550173	SCAPER	Q9BY12	1400 aa		32.46	■■■□□ 2.79
SLC38A1-208	ENST00000550173	PTPRM	P28827	1452 aa		32.46	■■■□□ 2.79
SLC38A1-208	ENST00000550173	ZMYM4	Q5VZL5	1548 aa		32.46	■■■□□ 2.79
SLC38A1-208	ENST00000550173	LRRIQ1	Q96JM4	1722 aa		32.46	■■■□□ 2.79
SLC38A1-208	ENST00000550173	KIF14	Q15058	1648 aa		32.45	■■■□□ 2.79
SLC38A1-208	ENST00000550173	EFCAB2	Q5VUJ9	269 aa		32.45	■■■□□ 2.79
SLC38A1-208	ENST00000550173	CLIP1	P30622	1438 aa		32.44	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms