RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
SMARCC2-209ENST00000550164 SENP3-EIF4A1A0A087X0R7 540 aa13.93□□□□□ -0.18
SMARCC2-209ENST00000550164 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
SMARCC2-209ENST00000550164 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■■□ 25.7
SMARCC2-209ENST00000550164 MYT1LQ9UL68 1186 aa13.91□□□□□ -0.18
SMARCC2-209ENST00000550164 ZNF777Q9ULD5 760 aaPredicted RBP13.91□□□□□ -0.18
SMARCC2-209ENST00000550164 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
SMARCC2-209ENST00000550164 BCL11AQ9H165 835 aa13.89□□□□□ -0.19
SMARCC2-209ENST00000550164 TOP2AP11388 1531 aaKnown RBP13.88□□□□□ -0.19
SMARCC2-209ENST00000550164 RAB3GAP2Q9H2M9 1393 aa13.87□□□□□ -0.19
SMARCC2-209ENST00000550164 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
SMARCC2-209ENST00000550164 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
SMARCC2-209ENST00000550164 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
SMARCC2-209ENST00000550164 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
SMARCC2-209ENST00000550164 CCER2I3L3R5 266 aa13.83□□□□□ -0.2
SMARCC2-209ENST00000550164 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
SMARCC2-209ENST00000550164 SETD5Q9C0A6 1442 aa13.83□□□□□ -0.2
SMARCC2-209ENST00000550164 FBLN2P98095 1184 aa13.82□□□□□ -0.2
SMARCC2-209ENST00000550164 PPP4R2Q9NY27 417 aa13.81□□□□□ -0.2
SMARCC2-209ENST00000550164 TIMELESSQ9UNS1 1208 aa13.79□□□□□ -0.2
SMARCC2-209ENST00000550164 KDM2AQ9Y2K7 1162 aa13.77□□□□□ -0.21
SMARCC2-209ENST00000550164 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
SMARCC2-209ENST00000550164 CARMIL1Q5VZK9 1371 aa13.74□□□□□ -0.21
SMARCC2-209ENST00000550164 CUX2O14529 1486 aa13.73□□□□□ -0.21
SMARCC2-209ENST00000550164 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
SMARCC2-209ENST00000550164 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
SMARCC2-209ENST00000550164 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.21
SMARCC2-209ENST00000550164 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.21
SMARCC2-209ENST00000550164 HSPA5P11021 654 aaKnown RBP13.71□□□□□ -0.21
SMARCC2-209ENST00000550164 SMARCA2P51531 1590 aa13.71□□□□□ -0.21
SMARCC2-209ENST00000550164 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
SMARCC2-209ENST00000550164 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
SMARCC2-209ENST00000550164 FOXD1Q16676 465 aa13.66□□□□□ -0.22
SMARCC2-209ENST00000550164 ARHGAP35Q9NRY4 1499 aa13.64□□□□□ -0.23
SMARCC2-209ENST00000550164 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
SMARCC2-209ENST00000550164 KIF21BO75037 1637 aa13.63□□□□□ -0.23
SMARCC2-209ENST00000550164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.62□□□□□ -0.233e-7■■■□□ 19.2
SMARCC2-209ENST00000550164 RTN4Q9NQC3 1192 aaKnown RBP13.61□□□□□ -0.23
SMARCC2-209ENST00000550164 TSPY4P0CV99 314 aa13.59□□□□□ -0.23
SMARCC2-209ENST00000550164 TSPY10P0CW01 314 aa13.59□□□□□ -0.23
SMARCC2-209ENST00000550164 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
SMARCC2-209ENST00000550164 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
SMARCC2-209ENST00000550164 RGL3Q3MIN7 710 aa13.58□□□□□ -0.24
SMARCC2-209ENST00000550164 ERICH6BQ5W0A0 696 aa13.58□□□□□ -0.24
SMARCC2-209ENST00000550164 NEFMP07197 916 aa13.57□□□□□ -0.24
SMARCC2-209ENST00000550164 WDR43Q15061 677 aaKnown RBP eCLIP13.57□□□□□ -0.249e-6■■■□□ 15.6
SMARCC2-209ENST00000550164 ARXQ96QS3 562 aa13.57□□□□□ -0.24
SMARCC2-209ENST00000550164 FHOD3Q2V2M9 1422 aa13.56□□□□□ -0.24
SMARCC2-209ENST00000550164 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
SMARCC2-209ENST00000550164 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
SMARCC2-209ENST00000550164 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.54□□□□□ -0.24
SMARCC2-209ENST00000550164 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
SMARCC2-209ENST00000550164 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
SMARCC2-209ENST00000550164 ARAP1Q96P48 1450 aa13.51□□□□□ -0.25
SMARCC2-209ENST00000550164 DDRGK1Q96HY6 314 aa13.51□□□□□ -0.25
SMARCC2-209ENST00000550164 UPF2Q9HAU5 1272 aaKnown RBP13.5□□□□□ -0.25
SMARCC2-209ENST00000550164 PPM1GO15355 546 aaPredicted RBP13.49□□□□□ -0.25
SMARCC2-209ENST00000550164 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
SMARCC2-209ENST00000550164 FMN1Q68DA7 1419 aa13.49□□□□□ -0.25
SMARCC2-209ENST00000550164 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
SMARCC2-209ENST00000550164 PRKRIP1Q9H875 184 aaPredicted RBP13.48□□□□□ -0.25
SMARCC2-209ENST00000550164 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
SMARCC2-209ENST00000550164 CC2D1BQ5T0F9 858 aaKnown RBP13.47□□□□□ -0.25
SMARCC2-209ENST00000550164 RGS3P49796 1198 aa13.47□□□□□ -0.25
SMARCC2-209ENST00000550164 NUDCQ9Y266 331 aa13.46□□□□□ -0.26
SMARCC2-209ENST00000550164 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
SMARCC2-209ENST00000550164 IPO9Q96P70 1041 aaKnown RBP13.45□□□□□ -0.26
SMARCC2-209ENST00000550164 EIF4G1Q04637 1599 aaKnown RBP13.44□□□□□ -0.26
SMARCC2-209ENST00000550164 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
SMARCC2-209ENST00000550164 CHMP7Q8WUX9 453 aaPredicted RBP13.44□□□□□ -0.26
SMARCC2-209ENST00000550164 CCDC18Q5T9S5 1454 aa13.43□□□□□ -0.26
SMARCC2-209ENST00000550164 PLEKHD1A6NEE1 506 aa13.43□□□□□ -0.26
SMARCC2-209ENST00000550164 PKD2Q13563 968 aa13.43□□□□□ -0.26
SMARCC2-209ENST00000550164 IGF1RP08069 1367 aa13.43□□□□□ -0.26
SMARCC2-209ENST00000550164 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
SMARCC2-209ENST00000550164 RCAN3Q9UKA8 241 aa13.41□□□□□ -0.26
SMARCC2-209ENST00000550164 HSP90AA1P07900 732 aaKnown RBP13.41□□□□□ -0.26
SMARCC2-209ENST00000550164 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
SMARCC2-209ENST00000550164 KNSTRNQ9Y448 316 aa13.4□□□□□ -0.26
SMARCC2-209ENST00000550164 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
SMARCC2-209ENST00000550164 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
SMARCC2-209ENST00000550164 WDR97A6NE52 1622 aa13.38□□□□□ -0.27
SMARCC2-209ENST00000550164 PRXQ9BXM0 1461 aa13.37□□□□□ -0.27
SMARCC2-209ENST00000550164 TCERG1O14776 1098 aaKnown RBP13.37□□□□□ -0.27
SMARCC2-209ENST00000550164 BECN1Q14457 450 aa13.36□□□□□ -0.27
SMARCC2-209ENST00000550164 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
SMARCC2-209ENST00000550164 NEUROD2Q15784 382 aa13.36□□□□□ -0.27
SMARCC2-209ENST00000550164 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
SMARCC2-209ENST00000550164 FGD6Q6ZV73 1430 aa13.34□□□□□ -0.27
SMARCC2-209ENST00000550164 CCDC184Q52MB2 194 aa13.33□□□□□ -0.28
SMARCC2-209ENST00000550164 UACAQ9BZF9 1416 aa13.33□□□□□ -0.28
SMARCC2-209ENST00000550164 MSH5O43196 834 aa13.32□□□□□ -0.28
SMARCC2-209ENST00000550164 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
SMARCC2-209ENST00000550164 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
SMARCC2-209ENST00000550164 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
SMARCC2-209ENST00000550164 RALBP1Q15311 655 aa13.31□□□□□ -0.28
SMARCC2-209ENST00000550164 CCDC7Q96M83 1385 aa13.31□□□□□ -0.28
SMARCC2-209ENST00000550164 KIF7Q2M1P5 1343 aa13.3□□□□□ -0.28
SMARCC2-209ENST00000550164 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
SMARCC2-209ENST00000550164 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms