RNA–Protein interactions for RNA: ENST00000550037.5

TMEM116-210, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-210ENST00000550037 FBLN2P98095 1184 aa8.77□□□□□ -1.01
TMEM116-210ENST00000550037 ZNF692Q9BU19 519 aaPredicted RBP8.76□□□□□ -1.01
TMEM116-210ENST00000550037 SMARCA2P51531 1590 aa8.76□□□□□ -1.01
TMEM116-210ENST00000550037 SSUH2Q9Y2M2 353 aa8.75□□□□□ -1.01
TMEM116-210ENST00000550037 FARP1Q9Y4F1 1045 aaPredicted RBP8.75□□□□□ -1.01
TMEM116-210ENST00000550037 ATAD2BQ9ULI0 1458 aa8.73□□□□□ -1.01
TMEM116-210ENST00000550037 ZNF579Q8NAF0 562 aaKnown RBP8.71□□□□□ -1.02
TMEM116-210ENST00000550037 GALR2O43603 387 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-210ENST00000550037 KIF21AQ7Z4S6 1674 aa8.68□□□□□ -1.02
TMEM116-210ENST00000550037 LCE2DQ5TA82 110 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-210ENST00000550037 FAM163AQ96GL9 167 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-210ENST00000550037 ZRANB1Q9UGI0 708 aa8.67□□□□□ -1.02
TMEM116-210ENST00000550037 BAZ1AQ9NRL2 1556 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-210ENST00000550037 FOXD4L1Q9NU39 408 aa8.66□□□□□ -1.02
TMEM116-210ENST00000550037 HMGXB3Q12766 1538 aa8.64□□□□□ -1.03
TMEM116-210ENST00000550037 PDS5BQ9NTI5 1447 aa8.63□□□□□ -1.03
TMEM116-210ENST00000550037 RIMBP3CA6NJZ7 1639 aa8.62□□□□□ -1.03
TMEM116-210ENST00000550037 RIMBP3BA6NNM3 1639 aa8.62□□□□□ -1.03
TMEM116-210ENST00000550037 RIMBP3Q9UFD9 1639 aa8.62□□□□□ -1.03
TMEM116-210ENST00000550037 LAMC3Q9Y6N6 1575 aa8.62□□□□□ -1.03
TMEM116-210ENST00000550037 BAZ1BQ9UIG0 1483 aaKnown RBP8.6□□□□□ -1.03
TMEM116-210ENST00000550037 CYB5RLQ6IPT4 315 aa8.6□□□□□ -1.03
TMEM116-210ENST00000550037 MRC2Q9UBG0 1479 aa8.59□□□□□ -1.03
TMEM116-210ENST00000550037 MAMSTRQ6ZN01 415 aa8.58□□□□□ -1.04
TMEM116-210ENST00000550037 PELP1Q8IZL8 1130 aaKnown RBP8.58□□□□□ -1.04
TMEM116-210ENST00000550037 MKRN4PQ13434 485 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-210ENST00000550037 WDR62O43379 1518 aa8.57□□□□□ -1.04
TMEM116-210ENST00000550037 SMARCA4P51532 1647 aa8.57□□□□□ -1.04
TMEM116-210ENST00000550037 POTEJP0CG39 1038 aa8.56□□□□□ -1.04
TMEM116-210ENST00000550037 CDAN1Q8IWY9 1227 aa8.55□□□□□ -1.04
TMEM116-210ENST00000550037 METRNQ9UJH8 293 aa8.55□□□□□ -1.04
TMEM116-210ENST00000550037 ARHGEF11O15085 1522 aa8.54□□□□□ -1.04
TMEM116-210ENST00000550037 CADPSQ9ULU8 1353 aa8.53□□□□□ -1.04
TMEM116-210ENST00000550037 SCUBE2Q9NQ36 999 aa8.5□□□□□ -1.05
TMEM116-210ENST00000550037 C7P10643 843 aa8.48□□□□□ -1.05
TMEM116-210ENST00000550037 SLC39A7Q92504 469 aa8.47□□□□□ -1.05
TMEM116-210ENST00000550037 PHF12Q96QT6 1004 aa8.47□□□□□ -1.05
TMEM116-210ENST00000550037 ILDR1Q86SU0 546 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-210ENST00000550037 CEP164Q9UPV0 1460 aa8.45□□□□□ -1.06
TMEM116-210ENST00000550037 PEG3Q9GZU2 1588 aa8.45□□□□□ -1.06
TMEM116-210ENST00000550037 ATXN8OSP0DMR3 200 aa8.45□□□□□ -1.06
TMEM116-210ENST00000550037 ARAP1Q96P48 1450 aa8.45□□□□□ -1.06
TMEM116-210ENST00000550037 PAK3O75914 559 aaPredicted RBP8.44□□□□□ -1.06
TMEM116-210ENST00000550037 FANCD2Q9BXW9 1451 aa8.44□□□□□ -1.06
TMEM116-210ENST00000550037 ZNF608Q9ULD9 1512 aaPredicted RBP8.43□□□□□ -1.06
TMEM116-210ENST00000550037 MROH2BQ7Z745 1585 aa8.43□□□□□ -1.06
TMEM116-210ENST00000550037 MMRN1Q13201 1228 aa8.42□□□□□ -1.06
TMEM116-210ENST00000550037 ASTLQ6HA08 431 aaPredicted RBP8.42□□□□□ -1.06
TMEM116-210ENST00000550037 URB2Q14146 1524 aaKnown RBP8.42□□□□□ -1.06
TMEM116-210ENST00000550037 ATMINO43313 823 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-210ENST00000550037 SPNS2Q8IVW8 549 aa8.36□□□□□ -1.07
TMEM116-210ENST00000550037 SLC4A1APQ9BWU0 796 aaKnown RBP8.36□□□□□ -1.07
TMEM116-210ENST00000550037 CREBZFQ9NS37 354 aa8.36□□□□□ -1.07
TMEM116-210ENST00000550037 MS4A3Q96HJ5 214 aa8.33□□□□□ -1.08
TMEM116-210ENST00000550037 CFTRP13569 1480 aa8.32□□□□□ -1.08
TMEM116-210ENST00000550037 AQRO60306 1485 aaKnown RBP eCLIP8.3□□□□□ -1.088e-7■■■■■ 28.7
TMEM116-210ENST00000550037 IFT140Q96RY7 1462 aa8.3□□□□□ -1.08
TMEM116-210ENST00000550037 RSF1Q96T23 1441 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-210ENST00000550037 CHD1O14646 1710 aa8.29□□□□□ -1.08
TMEM116-210ENST00000550037 WIZO95785 1651 aa8.29□□□□□ -1.08
TMEM116-210ENST00000550037 EIF4G3O43432 1585 aaKnown RBP8.27□□□□□ -1.09
TMEM116-210ENST00000550037 ATN1P54259 1190 aaPredicted RBP8.27□□□□□ -1.09
TMEM116-210ENST00000550037 ZBTB22O15209 634 aa8.26□□□□□ -1.09
TMEM116-210ENST00000550037 POTEFA5A3E0 1075 aa8.25□□□□□ -1.09
TMEM116-210ENST00000550037 ST18O60284 1047 aa8.25□□□□□ -1.09
TMEM116-210ENST00000550037 KDM4FA0A1W2PPD8 638 aa8.23□□□□□ -1.09
TMEM116-210ENST00000550037 TOPBP1Q92547 1522 aa8.22□□□□□ -1.09
TMEM116-210ENST00000550037 NPM1P06748 294 aaKnown RBP eCLIP8.21□□□□□ -1.1
TMEM116-210ENST00000550037 CLASP1Q7Z460 1538 aa8.19□□□□□ -1.1
TMEM116-210ENST00000550037 STAG3Q9UJ98 1225 aa8.18□□□□□ -1.1
TMEM116-210ENST00000550037 TDRD9Q8NDG6 1382 aaKnown RBP8.18□□□□□ -1.1
TMEM116-210ENST00000550037 CHMP7Q8WUX9 453 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-210ENST00000550037 GAPVD1Q14C86 1478 aa8.17□□□□□ -1.1
TMEM116-210ENST00000550037 TARBP1Q13395 1621 aaKnown RBP8.17□□□□□ -1.1
TMEM116-210ENST00000550037 RAD54L2Q9Y4B4 1467 aa8.15□□□□□ -1.1
TMEM116-210ENST00000550037 SLAIN1Q8ND83 568 aa8.15□□□□□ -1.1
TMEM116-210ENST00000550037 SNAPC4Q5SXM2 1469 aa8.14□□□□□ -1.11
TMEM116-210ENST00000550037 SEC24BO95487 1268 aa8.14□□□□□ -1.11
TMEM116-210ENST00000550037 BMP2KQ9NSY1 1161 aaPredicted RBP8.14□□□□□ -1.11
TMEM116-210ENST00000550037 COLQQ9Y215 455 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-210ENST00000550037 ERCC6L2Q5T890 1561 aa8.12□□□□□ -1.11
TMEM116-210ENST00000550037 POLA1P09884 1462 aaPredicted RBP8.12□□□□□ -1.11
TMEM116-210ENST00000550037 SYNJ1O43426 1573 aa8.11□□□□□ -1.11
TMEM116-210ENST00000550037 DNMBPQ6XZF7 1577 aa8.11□□□□□ -1.11
TMEM116-210ENST00000550037 TOP2AP11388 1531 aaKnown RBP8.1□□□□□ -1.11
TMEM116-210ENST00000550037 MNX1P50219 401 aaPredicted RBP8.09□□□□□ -1.11
TMEM116-210ENST00000550037 TMEM121BQ9BXQ6 578 aaPredicted RBP8.09□□□□□ -1.11
TMEM116-210ENST00000550037 SOGA1O94964 1423 aa8.09□□□□□ -1.11
TMEM116-210ENST00000550037 ABCC8Q09428 1581 aa8.09□□□□□ -1.11
TMEM116-210ENST00000550037 CCDC88BA6NC98 1476 aa8.08□□□□□ -1.12
TMEM116-210ENST00000550037 PRDM2Q13029 1718 aa8.08□□□□□ -1.12
TMEM116-210ENST00000550037 FAM69CQ0P6D2 419 aa8.07□□□□□ -1.12
TMEM116-210ENST00000550037 TRPC6Q9Y210 931 aa8.07□□□□□ -1.12
TMEM116-210ENST00000550037 KIF13AQ9H1H9 1805 aa8.07□□□□□ -1.12
TMEM116-210ENST00000550037 MARVELD3Q96A59 401 aa8.06□□□□□ -1.12
TMEM116-210ENST00000550037 TSPYL2Q9H2G4 693 aaPredicted RBP8.06□□□□□ -1.12
TMEM116-210ENST00000550037 SYNJ2O15056 1496 aa8.05□□□□□ -1.12
TMEM116-210ENST00000550037 TIE1P35590 1138 aa8.04□□□□□ -1.12
TMEM116-210ENST00000550037 MAGI1Q96QZ7 1491 aaPredicted RBP8.04□□□□□ -1.12
TMEM116-210ENST00000550037 GRIN2BQ13224 1484 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 279.8 ms