RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 PRG4Q92954 1404 aaPredicted RBP27.69■■■□□ 2.02
COX6A1-203ENST00000550009 JPH4Q96JJ6 628 aa27.67■■■□□ 2.02
COX6A1-203ENST00000550009 CARMIL1Q5VZK9 1371 aa27.57■■■□□ 2
COX6A1-203ENST00000550009 KIAA0586Q9BVV6 1533 aa27.54■■■□□ 2
COX6A1-203ENST00000550009 KIF13AQ9H1H9 1805 aa27.48■■□□□ 1.99
COX6A1-203ENST00000550009 ADCY10Q96PN6 1610 aa27.45■■□□□ 1.99
COX6A1-203ENST00000550009 IQGAP2Q13576 1575 aa27.38■■□□□ 1.97
COX6A1-203ENST00000550009 TTBK1Q5TCY1 1321 aaPredicted RBP27.37■■□□□ 1.97
COX6A1-203ENST00000550009 RAPGEF2Q9Y4G8 1499 aa27.33■■□□□ 1.97
COX6A1-203ENST00000550009 DISP1Q96F81 1524 aa27.27■■□□□ 1.96
COX6A1-203ENST00000550009 CTTNBP2Q8WZ74 1663 aa27.25■■□□□ 1.95
COX6A1-203ENST00000550009 PTPRGP23470 1445 aa27.24■■□□□ 1.95
COX6A1-203ENST00000550009 MAPKBP1O60336 1514 aa27.21■■□□□ 1.95
COX6A1-203ENST00000550009 DIP2BQ9P265 1576 aa27.21■■□□□ 1.95
COX6A1-203ENST00000550009 TNIKQ9UKE5 1360 aa27.2■■□□□ 1.94
COX6A1-203ENST00000550009 TSPOAP1O95153 1857 aa27.19■■□□□ 1.94
COX6A1-203ENST00000550009 UGGT2Q9NYU1 1516 aa27.19■■□□□ 1.94
COX6A1-203ENST00000550009 CARMIL2Q6F5E8 1435 aa27.18■■□□□ 1.94
COX6A1-203ENST00000550009 ABCC10Q5T3U5 1492 aa27.18■■□□□ 1.94
COX6A1-203ENST00000550009 KIAA0556O60303 1618 aa27.16■■□□□ 1.94
COX6A1-203ENST00000550009 NPM1P06748 294 aaKnown RBP eCLIP27.16■■□□□ 1.94
COX6A1-203ENST00000550009 FAM69CQ0P6D2 419 aa27.16■■□□□ 1.94
COX6A1-203ENST00000550009 PRXQ9BXM0 1461 aa27.14■■□□□ 1.94
COX6A1-203ENST00000550009 ABCC2Q92887 1545 aa27.08■■□□□ 1.93
COX6A1-203ENST00000550009 UACAQ9BZF9 1416 aa27.05■■□□□ 1.92
COX6A1-203ENST00000550009 UHRF1BP1LA0JNW5 1464 aa27.03■■□□□ 1.92
COX6A1-203ENST00000550009 ZCCHC11Q5TAX3 1644 aaKnown RBP27.02■■□□□ 1.92
COX6A1-203ENST00000550009 ASXL2Q76L83 1435 aa27■■□□□ 1.91
COX6A1-203ENST00000550009 PLB1Q6P1J6 1458 aa26.98■■□□□ 1.91
COX6A1-203ENST00000550009 PPRC1Q5VV67 1664 aaKnown RBP26.98■■□□□ 1.91
COX6A1-203ENST00000550009 CSRNP3Q8WYN3 585 aa26.95■■□□□ 1.9
COX6A1-203ENST00000550009 KDM5BQ9UGL1 1544 aa26.95■■□□□ 1.9
COX6A1-203ENST00000550009 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
COX6A1-203ENST00000550009 P3H3Q8IVL6 736 aa26.9■■□□□ 1.9
COX6A1-203ENST00000550009 ABCA8O94911 1581 aa26.89■■□□□ 1.9
COX6A1-203ENST00000550009 GOLGA3Q08378 1498 aa26.87■■□□□ 1.89
COX6A1-203ENST00000550009 KDM6BO15054 1643 aa26.87■■□□□ 1.89
COX6A1-203ENST00000550009 GLI2P10070 1586 aa26.86■■□□□ 1.89
COX6A1-203ENST00000550009 EPRSP07814 1512 aaKnown RBP26.85■■□□□ 1.89
COX6A1-203ENST00000550009 MAP3K4Q9Y6R4 1608 aa26.83■■□□□ 1.88
COX6A1-203ENST00000550009 SAMD9Q5K651 1589 aa26.81■■□□□ 1.88
COX6A1-203ENST00000550009 RANGAP1P46060 587 aaPredicted RBP26.8■■□□□ 1.88
COX6A1-203ENST00000550009 ARID3CA6NKF2 412 aa26.79■■□□□ 1.88
COX6A1-203ENST00000550009 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
COX6A1-203ENST00000550009 EEA1Q15075 1411 aa26.76■■□□□ 1.87
COX6A1-203ENST00000550009 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
COX6A1-203ENST00000550009 WDR7Q9Y4E6 1490 aa26.74■■□□□ 1.87
COX6A1-203ENST00000550009 AEBP2Q6ZN18 517 aaPredicted RBP26.72■■□□□ 1.87
COX6A1-203ENST00000550009 COL17A1Q9UMD9 1497 aaPredicted RBP26.72■■□□□ 1.87
COX6A1-203ENST00000550009 KIF21BO75037 1637 aa26.72■■□□□ 1.87
COX6A1-203ENST00000550009 KCNH8Q96L42 1107 aa26.68■■□□□ 1.86
COX6A1-203ENST00000550009 ATP10BO94823 1461 aa26.67■■□□□ 1.86
COX6A1-203ENST00000550009 FHOD3Q2V2M9 1422 aa26.66■■□□□ 1.86
COX6A1-203ENST00000550009 RAPGEF6Q8TEU7 1601 aa26.66■■□□□ 1.86
COX6A1-203ENST00000550009 CFAP43Q8NDM7 1665 aa26.62■■□□□ 1.85
COX6A1-203ENST00000550009 NUP153P49790 1475 aaKnown RBP26.55■■□□□ 1.84
COX6A1-203ENST00000550009 KDM4FA0A1W2PPD8 638 aa26.55■■□□□ 1.84
COX6A1-203ENST00000550009 CD109Q6YHK3 1445 aa26.55■■□□□ 1.84
COX6A1-203ENST00000550009 TEX14Q8IWB6 1497 aa26.54■■□□□ 1.84
COX6A1-203ENST00000550009 MAGI3Q5TCQ9 1506 aa26.49■■□□□ 1.83
COX6A1-203ENST00000550009 ABCA9Q8IUA7 1624 aa26.47■■□□□ 1.83
COX6A1-203ENST00000550009 EFCAB5A4FU69 1503 aa26.46■■□□□ 1.83
COX6A1-203ENST00000550009 UBTFP17480 764 aaKnown RBP26.46■■□□□ 1.83
COX6A1-203ENST00000550009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.44■■□□□ 1.82
COX6A1-203ENST00000550009 HNRNPUL2Q1KMD3 747 aaKnown RBP26.44■■□□□ 1.82
COX6A1-203ENST00000550009 ARHGAP35Q9NRY4 1499 aa26.4■■□□□ 1.82
COX6A1-203ENST00000550009 CDK13Q14004 1512 aaKnown RBP26.39■■□□□ 1.82
COX6A1-203ENST00000550009 ADGRL1O94910 1474 aa26.36■■□□□ 1.81
COX6A1-203ENST00000550009 LRRIQ1Q96JM4 1722 aa26.36■■□□□ 1.81
COX6A1-203ENST00000550009 TTC37Q6PGP7 1564 aa26.31■■□□□ 1.8
COX6A1-203ENST00000550009 ARAP3Q8WWN8 1544 aa26.29■■□□□ 1.8
COX6A1-203ENST00000550009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.86e-7■■■□□ 17.9
COX6A1-203ENST00000550009 FRMPD1Q5SYB0 1578 aa26.27■■□□□ 1.8
COX6A1-203ENST00000550009 ATP1B4Q9UN42 357 aaPredicted RBP26.26■■□□□ 1.79
COX6A1-203ENST00000550009 RAPGEF3O95398 923 aa26.25■■□□□ 1.79
COX6A1-203ENST00000550009 PLEKHD1A6NEE1 506 aa26.24■■□□□ 1.79
COX6A1-203ENST00000550009 HECW1Q76N89 1606 aa26.22■■□□□ 1.79
COX6A1-203ENST00000550009 NEO1Q92859 1461 aa26.19■■□□□ 1.78
COX6A1-203ENST00000550009 FMN1Q68DA7 1419 aa26.19■■□□□ 1.78
COX6A1-203ENST00000550009 KIF14Q15058 1648 aa26.18■■□□□ 1.78
COX6A1-203ENST00000550009 RICTORQ6R327 1708 aa26.17■■□□□ 1.78
COX6A1-203ENST00000550009 PCF11O94913 1555 aaKnown RBP26.16■■□□□ 1.78
COX6A1-203ENST00000550009 FANCAO15360 1455 aa26.12■■□□□ 1.77
COX6A1-203ENST00000550009 AKNAQ7Z591 1439 aa26.11■■□□□ 1.77
COX6A1-203ENST00000550009 PHLDB1Q86UU1 1377 aa26.09■■□□□ 1.77
COX6A1-203ENST00000550009 MYO5CQ9NQX4 1742 aa26.09■■□□□ 1.77
COX6A1-203ENST00000550009 SIGLEC1Q9BZZ2 1709 aa26.08■■□□□ 1.77
COX6A1-203ENST00000550009 CFAP74Q9C0B2 1584 aa26.07■■□□□ 1.76
COX6A1-203ENST00000550009 DENND4BO75064 1496 aaPredicted RBP26.04■■□□□ 1.76
COX6A1-203ENST00000550009 ADAMTSL3P82987 1691 aa26.03■■□□□ 1.76
COX6A1-203ENST00000550009 PLCH2O75038 1416 aa26.02■■□□□ 1.76
COX6A1-203ENST00000550009 CDC42BPBQ9Y5S2 1711 aa26.02■■□□□ 1.76
COX6A1-203ENST00000550009 TROQ12816 1431 aaPredicted RBP26.01■■□□□ 1.75
COX6A1-203ENST00000550009 BCORL1Q5H9F3 1711 aa26■■□□□ 1.75
COX6A1-203ENST00000550009 ARHGEF40Q8TER5 1519 aa26■■□□□ 1.75
COX6A1-203ENST00000550009 CASKIN1Q8WXD9 1431 aa26■■□□□ 1.75
COX6A1-203ENST00000550009 CLIP1P30622 1438 aa25.99■■□□□ 1.75
COX6A1-203ENST00000550009 YEATS2Q9ULM3 1422 aa25.97■■□□□ 1.75
COX6A1-203ENST00000550009 HECW2Q9P2P5 1572 aa25.96■■□□□ 1.75
COX6A1-203ENST00000550009 ZMYM4Q5VZL5 1548 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms