RNA–Protein interactions for RNA: ENST00000549547.1

PRPF40B-210, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-210ENST00000549547 EEA1Q15075 1411 aa21.8■■□□□ 1.08
PRPF40B-210ENST00000549547 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
PRPF40B-210ENST00000549547 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
PRPF40B-210ENST00000549547 JPH4Q96JJ6 628 aa21.76■■□□□ 1.07
PRPF40B-210ENST00000549547 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
PRPF40B-210ENST00000549547 ERCC6L2Q5T890 1561 aa21.74■■□□□ 1.07
PRPF40B-210ENST00000549547 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
PRPF40B-210ENST00000549547 IQGAP2Q13576 1575 aa21.72■■□□□ 1.07
PRPF40B-210ENST00000549547 CSRNP3Q8WYN3 585 aa21.7■■□□□ 1.06
PRPF40B-210ENST00000549547 CTTNBP2Q8WZ74 1663 aa21.69■■□□□ 1.06
PRPF40B-210ENST00000549547 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
PRPF40B-210ENST00000549547 UGGT2Q9NYU1 1516 aa21.59■■□□□ 1.05
PRPF40B-210ENST00000549547 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
PRPF40B-210ENST00000549547 KIF21BO75037 1637 aa21.57■■□□□ 1.04
PRPF40B-210ENST00000549547 TNIKQ9UKE5 1360 aa21.52■■□□□ 1.04
PRPF40B-210ENST00000549547 DISP1Q96F81 1524 aa21.52■■□□□ 1.04
PRPF40B-210ENST00000549547 GOLGA3Q08378 1498 aa21.52■■□□□ 1.03
PRPF40B-210ENST00000549547 KIAA0556O60303 1618 aa21.51■■□□□ 1.03
PRPF40B-210ENST00000549547 PTPRGP23470 1445 aa21.49■■□□□ 1.03
PRPF40B-210ENST00000549547 ADCY10Q96PN6 1610 aa21.43■■□□□ 1.02
PRPF40B-210ENST00000549547 NPM1P06748 294 aaKnown RBP eCLIP21.39■■□□□ 1.01
PRPF40B-210ENST00000549547 TTBK1Q5TCY1 1321 aaPredicted RBP21.38■■□□□ 1.01
PRPF40B-210ENST00000549547 SAMD9Q5K651 1589 aa21.37■■□□□ 1.01
PRPF40B-210ENST00000549547 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
PRPF40B-210ENST00000549547 UHRF1BP1LA0JNW5 1464 aa21.36■■□□□ 1.01
PRPF40B-210ENST00000549547 UACAQ9BZF9 1416 aa21.36■■□□□ 1.01
PRPF40B-210ENST00000549547 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
PRPF40B-210ENST00000549547 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
PRPF40B-210ENST00000549547 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
PRPF40B-210ENST00000549547 EFCAB5A4FU69 1503 aa21.31■■□□□ 1
PRPF40B-210ENST00000549547 ABCA8O94911 1581 aa21.26■□□□□ 0.99
PRPF40B-210ENST00000549547 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
PRPF40B-210ENST00000549547 PLB1Q6P1J6 1458 aa21.24■□□□□ 0.99
PRPF40B-210ENST00000549547 KDM5BQ9UGL1 1544 aa21.24■□□□□ 0.99
PRPF40B-210ENST00000549547 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
PRPF40B-210ENST00000549547 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
PRPF40B-210ENST00000549547 RANGAP1P46060 587 aaPredicted RBP21.22■□□□□ 0.99
PRPF40B-210ENST00000549547 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
PRPF40B-210ENST00000549547 ABCC10Q5T3U5 1492 aa21.2■□□□□ 0.98
PRPF40B-210ENST00000549547 DIP2BQ9P265 1576 aa21.19■□□□□ 0.98
PRPF40B-210ENST00000549547 FHOD3Q2V2M9 1422 aa21.18■□□□□ 0.98
PRPF40B-210ENST00000549547 RAPGEF6Q8TEU7 1601 aa21.17■□□□□ 0.98
PRPF40B-210ENST00000549547 ASXL2Q76L83 1435 aa21.16■□□□□ 0.98
PRPF40B-210ENST00000549547 FAM69CQ0P6D2 419 aa21.12■□□□□ 0.97
PRPF40B-210ENST00000549547 ARHGAP35Q9NRY4 1499 aa21.12■□□□□ 0.97
PRPF40B-210ENST00000549547 FMN1Q68DA7 1419 aa21.09■□□□□ 0.97
PRPF40B-210ENST00000549547 GLI2P10070 1586 aa21.09■□□□□ 0.97
PRPF40B-210ENST00000549547 WDR7Q9Y4E6 1490 aa21.08■□□□□ 0.97
PRPF40B-210ENST00000549547 EPRSP07814 1512 aaKnown RBP21.04■□□□□ 0.96
PRPF40B-210ENST00000549547 ATP10BO94823 1461 aa21.04■□□□□ 0.96
PRPF40B-210ENST00000549547 NUP153P49790 1475 aaKnown RBP21.04■□□□□ 0.96
PRPF40B-210ENST00000549547 HECW1Q76N89 1606 aa21.01■□□□□ 0.95
PRPF40B-210ENST00000549547 CLIP1P30622 1438 aa21.01■□□□□ 0.95
PRPF40B-210ENST00000549547 TSPOAP1O95153 1857 aa21.01■□□□□ 0.95
PRPF40B-210ENST00000549547 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
PRPF40B-210ENST00000549547 ARID3CA6NKF2 412 aa20.98■□□□□ 0.95
PRPF40B-210ENST00000549547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.97■□□□□ 0.95
PRPF40B-210ENST00000549547 HNRNPUL2Q1KMD3 747 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-210ENST00000549547 CFAP43Q8NDM7 1665 aa20.96■□□□□ 0.95
PRPF40B-210ENST00000549547 PPRC1Q5VV67 1664 aaKnown RBP20.93■□□□□ 0.94
PRPF40B-210ENST00000549547 KCNH8Q96L42 1107 aa20.92■□□□□ 0.94
PRPF40B-210ENST00000549547 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
PRPF40B-210ENST00000549547 TEX14Q8IWB6 1497 aa20.91■□□□□ 0.94
PRPF40B-210ENST00000549547 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
PRPF40B-210ENST00000549547 PCF11O94913 1555 aaKnown RBP20.89■□□□□ 0.94
PRPF40B-210ENST00000549547 CASKIN1Q8WXD9 1431 aa20.89■□□□□ 0.94
PRPF40B-210ENST00000549547 PLEKHD1A6NEE1 506 aa20.89■□□□□ 0.93
PRPF40B-210ENST00000549547 CDK13Q14004 1512 aaKnown RBP20.88■□□□□ 0.93
PRPF40B-210ENST00000549547 ABCA9Q8IUA7 1624 aa20.88■□□□□ 0.93
PRPF40B-210ENST00000549547 FYCO1Q9BQS8 1478 aa20.88■□□□□ 0.93
PRPF40B-210ENST00000549547 KDM6BO15054 1643 aa20.87■□□□□ 0.93
PRPF40B-210ENST00000549547 CCDC18Q5T9S5 1454 aa20.87■□□□□ 0.93
PRPF40B-210ENST00000549547 CD109Q6YHK3 1445 aa20.87■□□□□ 0.93
PRPF40B-210ENST00000549547 MAGI3Q5TCQ9 1506 aa20.85■□□□□ 0.93
PRPF40B-210ENST00000549547 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
PRPF40B-210ENST00000549547 LRRIQ1Q96JM4 1722 aa20.84■□□□□ 0.93
PRPF40B-210ENST00000549547 LOC105371045A0A1W2PR82 267 aa20.84■□□□□ 0.93
PRPF40B-210ENST00000549547 KIF14Q15058 1648 aa20.75■□□□□ 0.91
PRPF40B-210ENST00000549547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.75■□□□□ 0.91
PRPF40B-210ENST00000549547 TROQ12816 1431 aaPredicted RBP20.75■□□□□ 0.91
PRPF40B-210ENST00000549547 PHLDB1Q86UU1 1377 aa20.73■□□□□ 0.91
PRPF40B-210ENST00000549547 TTC37Q6PGP7 1564 aa20.73■□□□□ 0.91
PRPF40B-210ENST00000549547 CFAP74Q9C0B2 1584 aa20.72■□□□□ 0.91
PRPF40B-210ENST00000549547 NEO1Q92859 1461 aa20.71■□□□□ 0.91
PRPF40B-210ENST00000549547 MYO5CQ9NQX4 1742 aa20.7■□□□□ 0.9
PRPF40B-210ENST00000549547 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
PRPF40B-210ENST00000549547 ARAP3Q8WWN8 1544 aa20.67■□□□□ 0.9
PRPF40B-210ENST00000549547 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
PRPF40B-210ENST00000549547 FANCAO15360 1455 aa20.64■□□□□ 0.89
PRPF40B-210ENST00000549547 PLCH2O75038 1416 aa20.63■□□□□ 0.89
PRPF40B-210ENST00000549547 MTUS2Q5JR59 1369 aa20.6■□□□□ 0.89
PRPF40B-210ENST00000549547 EHBP1L1Q8N3D4 1523 aa20.6■□□□□ 0.89
PRPF40B-210ENST00000549547 AKNAQ7Z591 1439 aa20.59■□□□□ 0.89
PRPF40B-210ENST00000549547 PREX2Q70Z35 1606 aa20.58■□□□□ 0.89
PRPF40B-210ENST00000549547 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
PRPF40B-210ENST00000549547 ARHGAP5Q13017 1502 aa20.57■□□□□ 0.88
PRPF40B-210ENST00000549547 EFCAB2Q5VUJ9 269 aa20.56■□□□□ 0.88
PRPF40B-210ENST00000549547 CDC42BPAQ5VT25 1732 aa20.56■□□□□ 0.88
PRPF40B-210ENST00000549547 CDC42BPBQ9Y5S2 1711 aa20.56■□□□□ 0.88
PRPF40B-210ENST00000549547 DENND4BO75064 1496 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms