RNA–Protein interactions for RNA: ENST00000549462.1

ITGB7-208, Transcript of integrin subunit beta 7, human

TSL 2

Gene ITGB7, Length 1,526 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB7-208	ENST00000549462	SHROOM2	Q13796	1616 aa		33.4	■■■□□ 2.94
ITGB7-208	ENST00000549462	PRG4	Q92954	1404 aa	Predicted RBP	33.36	■■■□□ 2.93
ITGB7-208	ENST00000549462	CHIC1	Q5VXU3	224 aa		33.36	■■■□□ 2.93
ITGB7-208	ENST00000549462	KIAA0586	Q9BVV6	1533 aa		33.32	■■■□□ 2.92
ITGB7-208	ENST00000549462	RAPGEF2	Q9Y4G8	1499 aa		33.25	■■■□□ 2.91
ITGB7-208	ENST00000549462	TRH	P20396	242 aa	Predicted RBP	33.12	■■■□□ 2.89
ITGB7-208	ENST00000549462	PRX	Q9BXM0	1461 aa		33.09	■■■□□ 2.89
ITGB7-208	ENST00000549462	IQGAP2	Q13576	1575 aa		33.08	■■■□□ 2.89
ITGB7-208	ENST00000549462	CSRNP3	Q8WYN3	585 aa		33.07	■■■□□ 2.88
ITGB7-208	ENST00000549462	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.02	■■■□□ 2.88
ITGB7-208	ENST00000549462	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33	■■■□□ 2.87
ITGB7-208	ENST00000549462	CARMIL2	Q6F5E8	1435 aa		32.97	■■■□□ 2.87
ITGB7-208	ENST00000549462	EEA1	Q15075	1411 aa		32.94	■■■□□ 2.86
ITGB7-208	ENST00000549462	PTPRG	P23470	1445 aa		32.93	■■■□□ 2.86
ITGB7-208	ENST00000549462	DISP1	Q96F81	1524 aa		32.92	■■■□□ 2.86
ITGB7-208	ENST00000549462	TNIK	Q9UKE5	1360 aa		32.91	■■■□□ 2.86
ITGB7-208	ENST00000549462	UGGT2	Q9NYU1	1516 aa		32.9	■■■□□ 2.86
ITGB7-208	ENST00000549462	CTTNBP2	Q8WZ74	1663 aa		32.84	■■■□□ 2.85
ITGB7-208	ENST00000549462	ADCY10	Q96PN6	1610 aa		32.83	■■■□□ 2.85
ITGB7-208	ENST00000549462	NPM1	P06748	294 aa	Known RBP eCLIP	32.81	■■■□□ 2.84
ITGB7-208	ENST00000549462	KIAA0556	O60303	1618 aa		32.77	■■■□□ 2.84
ITGB7-208	ENST00000549462	EHMT2	Q96KQ7	1210 aa		32.68	■■■□□ 2.82
ITGB7-208	ENST00000549462	GOLGA3	Q08378	1498 aa		32.68	■■■□□ 2.82
ITGB7-208	ENST00000549462	UACA	Q9BZF9	1416 aa		32.68	■■■□□ 2.82
ITGB7-208	ENST00000549462	P3H3	Q8IVL6	736 aa		32.65	■■■□□ 2.82
ITGB7-208	ENST00000549462	RANGAP1	P46060	587 aa	Predicted RBP	32.63	■■■□□ 2.81
ITGB7-208	ENST00000549462	KIF21B	O75037	1637 aa		32.62	■■■□□ 2.81
ITGB7-208	ENST00000549462	MAPKBP1	O60336	1514 aa		32.62	■■■□□ 2.81
ITGB7-208	ENST00000549462	ABCC2	Q92887	1545 aa		32.62	■■■□□ 2.81
ITGB7-208	ENST00000549462	UHRF1BP1L	A0JNW5	1464 aa		32.61	■■■□□ 2.81
ITGB7-208	ENST00000549462	FAM69C	Q0P6D2	419 aa		32.57	■■■□□ 2.8
ITGB7-208	ENST00000549462	ABCC10	Q5T3U5	1492 aa		32.55	■■■□□ 2.8
ITGB7-208	ENST00000549462	PLB1	Q6P1J6	1458 aa		32.55	■■■□□ 2.8
ITGB7-208	ENST00000549462	UBTF	P17480	764 aa	Known RBP	32.51	■■■□□ 2.79
ITGB7-208	ENST00000549462	KIF13A	Q9H1H9	1805 aa		32.51	■■■□□ 2.79
ITGB7-208	ENST00000549462	KDM5B	Q9UGL1	1544 aa		32.48	■■■□□ 2.79
ITGB7-208	ENST00000549462	ASXL2	Q76L83	1435 aa		32.47	■■■□□ 2.79
ITGB7-208	ENST00000549462	SAMD9	Q5K651	1589 aa		32.46	■■■□□ 2.79
ITGB7-208	ENST00000549462	DIP2B	Q9P265	1576 aa		32.46	■■■□□ 2.79
ITGB7-208	ENST00000549462	ABCA8	O94911	1581 aa		32.44	■■■□□ 2.78
ITGB7-208	ENST00000549462	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.39	■■■□□ 2.78
ITGB7-208	ENST00000549462	FHOD3	Q2V2M9	1422 aa		32.38	■■■□□ 2.77
ITGB7-208	ENST00000549462	ARID3C	A6NKF2	412 aa		32.37	■■■□□ 2.77
ITGB7-208	ENST00000549462	EFCAB5	A4FU69	1503 aa		32.26	■■■□□ 2.75
ITGB7-208	ENST00000549462	EPRS	P07814	1512 aa	Known RBP	32.26	■■■□□ 2.75
ITGB7-208	ENST00000549462	WDR7	Q9Y4E6	1490 aa		32.24	■■■□□ 2.75
ITGB7-208	ENST00000549462	ATP10B	O94823	1461 aa		32.23	■■■□□ 2.75
ITGB7-208	ENST00000549462	GLI2	P10070	1586 aa		32.21	■■■□□ 2.75
ITGB7-208	ENST00000549462	RAPGEF6	Q8TEU7	1601 aa		32.21	■■■□□ 2.75
ITGB7-208	ENST00000549462	KCNH8	Q96L42	1107 aa		32.21	■■■□□ 2.75
ITGB7-208	ENST00000549462	TSPOAP1	O95153	1857 aa		32.2	■■■□□ 2.75
ITGB7-208	ENST00000549462	ARHGAP35	Q9NRY4	1499 aa		32.17	■■■□□ 2.74
ITGB7-208	ENST00000549462	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.15	■■■□□ 2.74
ITGB7-208	ENST00000549462	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.15	■■■□□ 2.74
ITGB7-208	ENST00000549462	NUP153	P49790	1475 aa	Known RBP	32.15	■■■□□ 2.74
ITGB7-208	ENST00000549462	PPRC1	Q5VV67	1664 aa	Known RBP	32.06	■■■□□ 2.72
ITGB7-208	ENST00000549462	MAP3K4	Q9Y6R4	1608 aa		32.06	■■■□□ 2.72
ITGB7-208	ENST00000549462	LOC105371045	A0A1W2PR82	267 aa		32.02	■■■□□ 2.72
ITGB7-208	ENST00000549462	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.02	■■■□□ 2.72
ITGB7-208	ENST00000549462	FMN1	Q68DA7	1419 aa		32.01	■■■□□ 2.71
ITGB7-208	ENST00000549462	CD109	Q6YHK3	1445 aa		31.99	■■■□□ 2.71
ITGB7-208	ENST00000549462	KDM6B	O15054	1643 aa		31.99	■■■□□ 2.71
ITGB7-208	ENST00000549462	PLEKHD1	A6NEE1	506 aa		31.94	■■■□□ 2.7
ITGB7-208	ENST00000549462	TEX14	Q8IWB6	1497 aa		31.94	■■■□□ 2.7
ITGB7-208	ENST00000549462	CDK13	Q14004	1512 aa	Known RBP	31.93	■■■□□ 2.7
ITGB7-208	ENST00000549462	CLIP1	P30622	1438 aa		31.91	■■■□□ 2.7
ITGB7-208	ENST00000549462	CFAP43	Q8NDM7	1665 aa		31.9	■■■□□ 2.7
ITGB7-208	ENST00000549462	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.9	■■■□□ 2.7
ITGB7-208	ENST00000549462	MAGI3	Q5TCQ9	1506 aa		31.89	■■■□□ 2.7
ITGB7-208	ENST00000549462	HECW1	Q76N89	1606 aa		31.85	■■■□□ 2.69
ITGB7-208	ENST00000549462	ABCA9	Q8IUA7	1624 aa		31.83	■■■□□ 2.69
ITGB7-208	ENST00000549462	CASKIN1	Q8WXD9	1431 aa		31.76	■■■□□ 2.67
ITGB7-208	ENST00000549462	PCF11	O94913	1555 aa	Known RBP	31.75	■■■□□ 2.67
ITGB7-208	ENST00000549462	CEP162	Q5TB80	1403 aa		31.74	■■■□□ 2.67
ITGB7-208	ENST00000549462	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.72	■■■□□ 2.67
ITGB7-208	ENST00000549462	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.71	■■■□□ 2.67
ITGB7-208	ENST00000549462	LRRIQ1	Q96JM4	1722 aa		31.68	■■■□□ 2.66
ITGB7-208	ENST00000549462	TTC37	Q6PGP7	1564 aa		31.65	■■■□□ 2.66
ITGB7-208	ENST00000549462	FYCO1	Q9BQS8	1478 aa		31.64	■■■□□ 2.66
ITGB7-208	ENST00000549462	TRO	Q12816	1431 aa	Predicted RBP	31.63	■■■□□ 2.65
ITGB7-208	ENST00000549462	ARAP3	Q8WWN8	1544 aa		31.62	■■■□□ 2.65
ITGB7-208	ENST00000549462	CCDC18	Q5T9S5	1454 aa		31.61	■■■□□ 2.65
ITGB7-208	ENST00000549462	NEO1	Q92859	1461 aa		31.61	■■■□□ 2.65
ITGB7-208	ENST00000549462	PHLDB1	Q86UU1	1377 aa		31.6	■■■□□ 2.65
ITGB7-208	ENST00000549462	RAPGEF3	O95398	923 aa		31.59	■■■□□ 2.65
ITGB7-208	ENST00000549462	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.57	■■■□□ 2.64
ITGB7-208	ENST00000549462	KIF14	Q15058	1648 aa		31.57	■■■□□ 2.64
ITGB7-208	ENST00000549462	FANCA	O15360	1455 aa		31.55	■■■□□ 2.64
ITGB7-208	ENST00000549462	PLCH2	O75038	1416 aa		31.53	■■■□□ 2.64
ITGB7-208	ENST00000549462	AKNA	Q7Z591	1439 aa		31.53	■■■□□ 2.64
ITGB7-208	ENST00000549462	KDM4F	A0A1W2PPD8	638 aa		31.49	■■■□□ 2.63
ITGB7-208	ENST00000549462	EFCAB2	Q5VUJ9	269 aa		31.44	■■■□□ 2.62
ITGB7-208	ENST00000549462	DENND4B	O75064	1496 aa	Predicted RBP	31.43	■■■□□ 2.62
ITGB7-208	ENST00000549462	FRMPD1	Q5SYB0	1578 aa		31.42	■■■□□ 2.62
ITGB7-208	ENST00000549462	CFAP74	Q9C0B2	1584 aa		31.42	■■■□□ 2.62
ITGB7-208	ENST00000549462	MYO5C	Q9NQX4	1742 aa		31.39	■■■□□ 2.62
ITGB7-208	ENST00000549462	SCAPER	Q9BY12	1400 aa		31.38	■■■□□ 2.61
ITGB7-208	ENST00000549462	ADGRL1	O94910	1474 aa		31.38	■■■□□ 2.61
ITGB7-208	ENST00000549462	ARHGAP5	Q13017	1502 aa		31.36	■■■□□ 2.61
ITGB7-208	ENST00000549462	MTUS2	Q5JR59	1369 aa		31.35	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms