RNA–Protein interactions for RNA: ENST00000549461.1

PKP2-206, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-206ENST00000549461 TNIKQ9UKE5 1360 aa15.19■□□□□ 0.02
PKP2-206ENST00000549461 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
PKP2-206ENST00000549461 RANGAP1P46060 587 aaPredicted RBP15.15■□□□□ 0.02
PKP2-206ENST00000549461 NUP160Q12769 1436 aa15.15■□□□□ 0.02
PKP2-206ENST00000549461 CEP162Q5TB80 1403 aa15.11■□□□□ 0.01
PKP2-206ENST00000549461 KIAA0586Q9BVV6 1533 aa15.09■□□□□ 0.01
PKP2-206ENST00000549461 IQGAP2Q13576 1575 aa15.09■□□□□ 0.01
PKP2-206ENST00000549461 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
PKP2-206ENST00000549461 CLIP1P30622 1438 aa15.05■□□□□ -0
PKP2-206ENST00000549461 ARHGAP35Q9NRY4 1499 aa15.03■□□□□ -0
PKP2-206ENST00000549461 UGGT2Q9NYU1 1516 aa15.02□□□□□ -0.01
PKP2-206ENST00000549461 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
PKP2-206ENST00000549461 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
PKP2-206ENST00000549461 JPH4Q96JJ6 628 aa15.01□□□□□ -0.01
PKP2-206ENST00000549461 SAMD9Q5K651 1589 aa15□□□□□ -0.01
PKP2-206ENST00000549461 ARAP1Q96P48 1450 aa15□□□□□ -0.01
PKP2-206ENST00000549461 SHROOM2Q13796 1616 aa14.99□□□□□ -0.01
PKP2-206ENST00000549461 DISP1Q96F81 1524 aa14.99□□□□□ -0.01
PKP2-206ENST00000549461 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
PKP2-206ENST00000549461 FHOD3Q2V2M9 1422 aa14.98□□□□□ -0.01
PKP2-206ENST00000549461 PRG4Q92954 1404 aaPredicted RBP14.96□□□□□ -0.01
PKP2-206ENST00000549461 EFCAB5A4FU69 1503 aa14.96□□□□□ -0.02
PKP2-206ENST00000549461 KIAA0556O60303 1618 aa14.95□□□□□ -0.02
PKP2-206ENST00000549461 TTBK1Q5TCY1 1321 aaPredicted RBP14.91□□□□□ -0.02
PKP2-206ENST00000549461 CARMIL2Q6F5E8 1435 aa14.88□□□□□ -0.03
PKP2-206ENST00000549461 VPS8Q8N3P4 1428 aa14.87□□□□□ -0.03
PKP2-206ENST00000549461 PCF11O94913 1555 aaKnown RBP14.84□□□□□ -0.03
PKP2-206ENST00000549461 FMN1Q68DA7 1419 aa14.82□□□□□ -0.04
PKP2-206ENST00000549461 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
PKP2-206ENST00000549461 PTPRGP23470 1445 aa14.81□□□□□ -0.04
PKP2-206ENST00000549461 PLB1Q6P1J6 1458 aa14.81□□□□□ -0.04
PKP2-206ENST00000549461 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
PKP2-206ENST00000549461 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
PKP2-206ENST00000549461 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
PKP2-206ENST00000549461 ABCA8O94911 1581 aa14.77□□□□□ -0.04
PKP2-206ENST00000549461 CASKIN1Q8WXD9 1431 aa14.77□□□□□ -0.04
PKP2-206ENST00000549461 ATP1B4Q9UN42 357 aaPredicted RBP14.77□□□□□ -0.05
PKP2-206ENST00000549461 LRRIQ1Q96JM4 1722 aa14.77□□□□□ -0.05
PKP2-206ENST00000549461 RAPGEF6Q8TEU7 1601 aa14.77□□□□□ -0.05
PKP2-206ENST00000549461 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
PKP2-206ENST00000549461 FYCO1Q9BQS8 1478 aa14.76□□□□□ -0.05
PKP2-206ENST00000549461 PPARGC1BQ86YN6 1023 aaKnown RBP14.74□□□□□ -0.05
PKP2-206ENST00000549461 NUP153P49790 1475 aaKnown RBP14.74□□□□□ -0.05
PKP2-206ENST00000549461 HECW1Q76N89 1606 aa14.72□□□□□ -0.05
PKP2-206ENST00000549461 UACAQ9BZF9 1416 aa14.72□□□□□ -0.05
PKP2-206ENST00000549461 CDK13Q14004 1512 aaKnown RBP14.71□□□□□ -0.05
PKP2-206ENST00000549461 ADCY10Q96PN6 1610 aa14.7□□□□□ -0.06
PKP2-206ENST00000549461 EPRSP07814 1512 aaKnown RBP14.69□□□□□ -0.06
PKP2-206ENST00000549461 ABCC2Q92887 1545 aa14.69□□□□□ -0.06
PKP2-206ENST00000549461 KANK4Q5T7N3 995 aaPredicted RBP14.68□□□□□ -0.06
PKP2-206ENST00000549461 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
PKP2-206ENST00000549461 CFAP43Q8NDM7 1665 aa14.68□□□□□ -0.06
PKP2-206ENST00000549461 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
PKP2-206ENST00000549461 ATP10BO94823 1461 aa14.67□□□□□ -0.06
PKP2-206ENST00000549461 UHRF1BP1LA0JNW5 1464 aa14.66□□□□□ -0.06
PKP2-206ENST00000549461 MAGI3Q5TCQ9 1506 aa14.66□□□□□ -0.06
PKP2-206ENST00000549461 CCDC18Q5T9S5 1454 aa14.63□□□□□ -0.07
PKP2-206ENST00000549461 MAP3K1Q13233 1512 aa14.63□□□□□ -0.07
PKP2-206ENST00000549461 DNAJC5Q9H3Z4 198 aa14.63□□□□□ -0.07
PKP2-206ENST00000549461 ZCCHC11Q5TAX3 1644 aaKnown RBP14.63□□□□□ -0.07
PKP2-206ENST00000549461 APLP2Q06481 763 aa14.62□□□□□ -0.07
PKP2-206ENST00000549461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
PKP2-206ENST00000549461 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
PKP2-206ENST00000549461 LRRC9Q6ZRR7 1453 aa14.61□□□□□ -0.07
PKP2-206ENST00000549461 KDM5BQ9UGL1 1544 aa14.61□□□□□ -0.07
PKP2-206ENST00000549461 MTUS2Q5JR59 1369 aa14.56□□□□□ -0.08
PKP2-206ENST00000549461 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
PKP2-206ENST00000549461 KIF14Q15058 1648 aa14.53□□□□□ -0.08
PKP2-206ENST00000549461 TROQ12816 1431 aaPredicted RBP14.53□□□□□ -0.08
PKP2-206ENST00000549461 ASXL2Q76L83 1435 aa14.51□□□□□ -0.09
PKP2-206ENST00000549461 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
PKP2-206ENST00000549461 NCOA2Q15596 1464 aa14.5□□□□□ -0.09
PKP2-206ENST00000549461 CDK11AQ9UQ88 783 aaPredicted RBP14.5□□□□□ -0.09
PKP2-206ENST00000549461 PHLDB1Q86UU1 1377 aa14.49□□□□□ -0.09
PKP2-206ENST00000549461 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
PKP2-206ENST00000549461 SUPT6HQ7KZ85 1726 aaKnown RBP14.49□□□□□ -0.09
PKP2-206ENST00000549461 KCNH8Q96L42 1107 aa14.48□□□□□ -0.09
PKP2-206ENST00000549461 WDR7Q9Y4E6 1490 aa14.48□□□□□ -0.09
PKP2-206ENST00000549461 ABCC10Q5T3U5 1492 aa14.46□□□□□ -0.09
PKP2-206ENST00000549461 MAPKBP1O60336 1514 aa14.46□□□□□ -0.1
PKP2-206ENST00000549461 TTC37Q6PGP7 1564 aa14.45□□□□□ -0.1
PKP2-206ENST00000549461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.45□□□□□ -0.1
PKP2-206ENST00000549461 CCNB3Q8WWL7 1395 aa14.4□□□□□ -0.1
PKP2-206ENST00000549461 GPATCH8Q9UKJ3 1502 aaKnown RBP14.4□□□□□ -0.1
PKP2-206ENST00000549461 MYOM3Q5VTT5 1437 aa14.4□□□□□ -0.1
PKP2-206ENST00000549461 CDC42BPAQ5VT25 1732 aa14.39□□□□□ -0.11
PKP2-206ENST00000549461 FGD6Q6ZV73 1430 aa14.38□□□□□ -0.11
PKP2-206ENST00000549461 ABCA9Q8IUA7 1624 aa14.37□□□□□ -0.11
PKP2-206ENST00000549461 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
PKP2-206ENST00000549461 DIP2BQ9P265 1576 aa14.37□□□□□ -0.11
PKP2-206ENST00000549461 ZNF644Q9H582 1327 aaPredicted RBP14.36□□□□□ -0.11
PKP2-206ENST00000549461 CDC42BPBQ9Y5S2 1711 aa14.35□□□□□ -0.11
PKP2-206ENST00000549461 PREX2Q70Z35 1606 aa14.35□□□□□ -0.11
PKP2-206ENST00000549461 ITSN2Q9NZM3 1697 aa14.34□□□□□ -0.11
PKP2-206ENST00000549461 TRIM26Q12899 539 aaPredicted RBP14.34□□□□□ -0.11
PKP2-206ENST00000549461 MYO5CQ9NQX4 1742 aa14.34□□□□□ -0.11
PKP2-206ENST00000549461 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.11
PKP2-206ENST00000549461 FAM69CQ0P6D2 419 aa14.33□□□□□ -0.12
PKP2-206ENST00000549461 PLCH2O75038 1416 aa14.32□□□□□ -0.12
PKP2-206ENST00000549461 GLI2P10070 1586 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms