RNA–Protein interactions for RNA: ENST00000549107.5

PTPRR-208, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-208ENST00000549107 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
PTPRR-208ENST00000549107 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
PTPRR-208ENST00000549107 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
PTPRR-208ENST00000549107 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
PTPRR-208ENST00000549107 ARHGAP35Q9NRY4 1499 aa17.67■□□□□ 0.42
PTPRR-208ENST00000549107 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
PTPRR-208ENST00000549107 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
PTPRR-208ENST00000549107 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
PTPRR-208ENST00000549107 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
PTPRR-208ENST00000549107 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
PTPRR-208ENST00000549107 PPARGC1BQ86YN6 1023 aaKnown RBP17.54■□□□□ 0.4
PTPRR-208ENST00000549107 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
PTPRR-208ENST00000549107 IQGAP2Q13576 1575 aa17.53■□□□□ 0.4
PTPRR-208ENST00000549107 SAMD9Q5K651 1589 aa17.53■□□□□ 0.4
PTPRR-208ENST00000549107 FHOD3Q2V2M9 1422 aa17.49■□□□□ 0.39
PTPRR-208ENST00000549107 KIAA0586Q9BVV6 1533 aa17.48■□□□□ 0.39
PTPRR-208ENST00000549107 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
PTPRR-208ENST00000549107 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
PTPRR-208ENST00000549107 APLP2Q06481 763 aa17.46■□□□□ 0.39
PTPRR-208ENST00000549107 P3H3Q8IVL6 736 aa17.46■□□□□ 0.39
PTPRR-208ENST00000549107 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
PTPRR-208ENST00000549107 PCF11O94913 1555 aaKnown RBP17.45■□□□□ 0.38
PTPRR-208ENST00000549107 NUP160Q12769 1436 aa17.44■□□□□ 0.38
PTPRR-208ENST00000549107 FBLN2P98095 1184 aa17.42■□□□□ 0.38
PTPRR-208ENST00000549107 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
PTPRR-208ENST00000549107 TTBK1Q5TCY1 1321 aaPredicted RBP17.41■□□□□ 0.38
PTPRR-208ENST00000549107 CHD1O14646 1710 aa17.4■□□□□ 0.38
PTPRR-208ENST00000549107 FYCO1Q9BQS8 1478 aa17.39■□□□□ 0.37
PTPRR-208ENST00000549107 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
PTPRR-208ENST00000549107 MAP3K1Q13233 1512 aa17.38■□□□□ 0.37
PTPRR-208ENST00000549107 TIAM1Q13009 1591 aa17.37■□□□□ 0.37
PTPRR-208ENST00000549107 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
PTPRR-208ENST00000549107 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
PTPRR-208ENST00000549107 DISP1Q96F81 1524 aa17.36■□□□□ 0.37
PTPRR-208ENST00000549107 KANK4Q5T7N3 995 aaPredicted RBP17.31■□□□□ 0.36
PTPRR-208ENST00000549107 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.36
PTPRR-208ENST00000549107 LRRC9Q6ZRR7 1453 aa17.27■□□□□ 0.36
PTPRR-208ENST00000549107 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.36
PTPRR-208ENST00000549107 HECW1Q76N89 1606 aa17.26■□□□□ 0.35
PTPRR-208ENST00000549107 JPH4Q96JJ6 628 aa17.26■□□□□ 0.35
PTPRR-208ENST00000549107 CARMIL2Q6F5E8 1435 aa17.25■□□□□ 0.35
PTPRR-208ENST00000549107 SHROOM2Q13796 1616 aa17.22■□□□□ 0.35
PTPRR-208ENST00000549107 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
PTPRR-208ENST00000549107 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
PTPRR-208ENST00000549107 CLASP1Q7Z460 1538 aa17.2■□□□□ 0.34
PTPRR-208ENST00000549107 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
PTPRR-208ENST00000549107 EPRSP07814 1512 aaKnown RBP17.17■□□□□ 0.34
PTPRR-208ENST00000549107 RRBP1Q9P2E9 1410 aaKnown RBP17.15■□□□□ 0.34
PTPRR-208ENST00000549107 EHBP1L1Q8N3D4 1523 aa17.15■□□□□ 0.34
PTPRR-208ENST00000549107 NUP153P49790 1475 aaKnown RBP17.14■□□□□ 0.33
PTPRR-208ENST00000549107 CDK13Q14004 1512 aaKnown RBP17.13■□□□□ 0.33
PTPRR-208ENST00000549107 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
PTPRR-208ENST00000549107 PLB1Q6P1J6 1458 aa17.12■□□□□ 0.33
PTPRR-208ENST00000549107 MAGI3Q5TCQ9 1506 aa17.11■□□□□ 0.33
PTPRR-208ENST00000549107 ABCA8O94911 1581 aa17.11■□□□□ 0.33
PTPRR-208ENST00000549107 PHLDB1Q86UU1 1377 aa17.11■□□□□ 0.33
PTPRR-208ENST00000549107 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
PTPRR-208ENST00000549107 CCNB3Q8WWL7 1395 aa17.09■□□□□ 0.33
PTPRR-208ENST00000549107 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
PTPRR-208ENST00000549107 PTPRGP23470 1445 aa17.07■□□□□ 0.32
PTPRR-208ENST00000549107 HRCP23327 699 aa17.06■□□□□ 0.32
PTPRR-208ENST00000549107 NCOA2Q15596 1464 aa17.05■□□□□ 0.32
PTPRR-208ENST00000549107 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
PTPRR-208ENST00000549107 ARHGEF11O15085 1522 aa17.05■□□□□ 0.32
PTPRR-208ENST00000549107 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
PTPRR-208ENST00000549107 POTEDQ86YR6 584 aa17■□□□□ 0.31
PTPRR-208ENST00000549107 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
PTPRR-208ENST00000549107 FGD6Q6ZV73 1430 aa16.99■□□□□ 0.31
PTPRR-208ENST00000549107 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
PTPRR-208ENST00000549107 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
PTPRR-208ENST00000549107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
PTPRR-208ENST00000549107 ATP10BO94823 1461 aa16.97■□□□□ 0.31
PTPRR-208ENST00000549107 TROQ12816 1431 aaPredicted RBP16.96■□□□□ 0.31
PTPRR-208ENST00000549107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPRR-208ENST00000549107 ADCY10Q96PN6 1610 aa16.96■□□□□ 0.3
PTPRR-208ENST00000549107 ABCC2Q92887 1545 aa16.96■□□□□ 0.3
PTPRR-208ENST00000549107 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
PTPRR-208ENST00000549107 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
PTPRR-208ENST00000549107 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
PTPRR-208ENST00000549107 KIF14Q15058 1648 aa16.91■□□□□ 0.3
PTPRR-208ENST00000549107 UHRF1BP1LA0JNW5 1464 aa16.91■□□□□ 0.3
PTPRR-208ENST00000549107 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
PTPRR-208ENST00000549107 MIA2Q96PC5 1412 aa16.89■□□□□ 0.29
PTPRR-208ENST00000549107 ITGAEP38570 1179 aa16.89■□□□□ 0.29
PTPRR-208ENST00000549107 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
PTPRR-208ENST00000549107 ITSN2Q9NZM3 1697 aa16.86■□□□□ 0.29
PTPRR-208ENST00000549107 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
PTPRR-208ENST00000549107 CCER1Q8TC90 406 aaPredicted RBP16.86■□□□□ 0.29
PTPRR-208ENST00000549107 ZCCHC11Q5TAX3 1644 aaKnown RBP16.85■□□□□ 0.29
PTPRR-208ENST00000549107 ABCC10Q5T3U5 1492 aa16.83■□□□□ 0.28
PTPRR-208ENST00000549107 KDM5BQ9UGL1 1544 aa16.83■□□□□ 0.28
PTPRR-208ENST00000549107 GPATCH8Q9UKJ3 1502 aaKnown RBP16.81■□□□□ 0.28
PTPRR-208ENST00000549107 CDC42BPAQ5VT25 1732 aa16.8■□□□□ 0.28
PTPRR-208ENST00000549107 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
PTPRR-208ENST00000549107 SETD5Q9C0A6 1442 aa16.78■□□□□ 0.28
PTPRR-208ENST00000549107 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
PTPRR-208ENST00000549107 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
PTPRR-208ENST00000549107 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
PTPRR-208ENST00000549107 CAMSAP2Q08AD1 1489 aa16.76■□□□□ 0.27
PTPRR-208ENST00000549107 RAB3GAP2Q9H2M9 1393 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms