RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
SMPDL3B-206ENST00000549094 NEUROD1Q13562 356 aa20.16■□□□□ 0.82
SMPDL3B-206ENST00000549094 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
SMPDL3B-206ENST00000549094 IGF1RP08069 1367 aa20.11■□□□□ 0.81
SMPDL3B-206ENST00000549094 SYNJ2O15056 1496 aa20.1■□□□□ 0.81
SMPDL3B-206ENST00000549094 UBTFP17480 764 aaKnown RBP20.1■□□□□ 0.81
SMPDL3B-206ENST00000549094 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
SMPDL3B-206ENST00000549094 MYT1Q01538 1121 aa20.07■□□□□ 0.8
SMPDL3B-206ENST00000549094 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
SMPDL3B-206ENST00000549094 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
SMPDL3B-206ENST00000549094 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
SMPDL3B-206ENST00000549094 FBLN2P98095 1184 aa20.04■□□□□ 0.8
SMPDL3B-206ENST00000549094 GTF3C3Q9Y5Q9 886 aa20.04■□□□□ 0.8
SMPDL3B-206ENST00000549094 CUL7Q14999 1698 aa20.03■□□□□ 0.8
SMPDL3B-206ENST00000549094 ADAMTS12P58397 1594 aa20.03■□□□□ 0.8
SMPDL3B-206ENST00000549094 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.8
SMPDL3B-206ENST00000549094 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.79
SMPDL3B-206ENST00000549094 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.79
SMPDL3B-206ENST00000549094 CLASP1Q7Z460 1538 aa20.01■□□□□ 0.79
SMPDL3B-206ENST00000549094 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
SMPDL3B-206ENST00000549094 CLIP1P30622 1438 aa20.01■□□□□ 0.79
SMPDL3B-206ENST00000549094 TTBK1Q5TCY1 1321 aaPredicted RBP20■□□□□ 0.79
SMPDL3B-206ENST00000549094 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
SMPDL3B-206ENST00000549094 PRXQ9BXM0 1461 aa19.97■□□□□ 0.79
SMPDL3B-206ENST00000549094 GRIN2AQ12879 1464 aa19.95■□□□□ 0.78
SMPDL3B-206ENST00000549094 RAPGEF2Q9Y4G8 1499 aa19.94■□□□□ 0.78
SMPDL3B-206ENST00000549094 NUP160Q12769 1436 aa19.87■□□□□ 0.77
SMPDL3B-206ENST00000549094 APLP2Q06481 763 aa19.86■□□□□ 0.77
SMPDL3B-206ENST00000549094 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
SMPDL3B-206ENST00000549094 CLSPNQ9HAW4 1339 aa19.84■□□□□ 0.77
SMPDL3B-206ENST00000549094 ARAP1Q96P48 1450 aa19.82■□□□□ 0.76
SMPDL3B-206ENST00000549094 SHROOM2Q13796 1616 aa19.79■□□□□ 0.76
SMPDL3B-206ENST00000549094 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
SMPDL3B-206ENST00000549094 CTTNBP2Q8WZ74 1663 aa19.72■□□□□ 0.75
SMPDL3B-206ENST00000549094 CYB5RLQ6IPT4 315 aa19.72■□□□□ 0.75
SMPDL3B-206ENST00000549094 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
SMPDL3B-206ENST00000549094 MIER1Q8N108 512 aa19.69■□□□□ 0.74
SMPDL3B-206ENST00000549094 YTHDC1Q96MU7 727 aaKnown RBP19.67■□□□□ 0.74
SMPDL3B-206ENST00000549094 IQGAP2Q13576 1575 aa19.66■□□□□ 0.74
SMPDL3B-206ENST00000549094 ERCC6L2Q5T890 1561 aa19.65■□□□□ 0.74
SMPDL3B-206ENST00000549094 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
SMPDL3B-206ENST00000549094 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
SMPDL3B-206ENST00000549094 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
SMPDL3B-206ENST00000549094 JPH4Q96JJ6 628 aa19.6■□□□□ 0.73
SMPDL3B-206ENST00000549094 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
SMPDL3B-206ENST00000549094 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
SMPDL3B-206ENST00000549094 UGGT2Q9NYU1 1516 aa19.56■□□□□ 0.72
SMPDL3B-206ENST00000549094 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
SMPDL3B-206ENST00000549094 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
SMPDL3B-206ENST00000549094 DISP1Q96F81 1524 aa19.48■□□□□ 0.71
SMPDL3B-206ENST00000549094 SAMD9Q5K651 1589 aa19.47■□□□□ 0.71
SMPDL3B-206ENST00000549094 MAP3K1Q13233 1512 aa19.47■□□□□ 0.71
SMPDL3B-206ENST00000549094 KIAA0556O60303 1618 aa19.46■□□□□ 0.71
SMPDL3B-206ENST00000549094 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
SMPDL3B-206ENST00000549094 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
SMPDL3B-206ENST00000549094 CCNB3Q8WWL7 1395 aa19.45■□□□□ 0.7
SMPDL3B-206ENST00000549094 FHOD3Q2V2M9 1422 aa19.4■□□□□ 0.7
SMPDL3B-206ENST00000549094 TIAM1Q13009 1591 aa19.38■□□□□ 0.69
SMPDL3B-206ENST00000549094 ADCY10Q96PN6 1610 aa19.37■□□□□ 0.69
SMPDL3B-206ENST00000549094 KANK4Q5T7N3 995 aaPredicted RBP19.36■□□□□ 0.69
SMPDL3B-206ENST00000549094 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
SMPDL3B-206ENST00000549094 PTPRGP23470 1445 aa19.35■□□□□ 0.69
SMPDL3B-206ENST00000549094 CFAP43Q8NDM7 1665 aa19.33■□□□□ 0.69
SMPDL3B-206ENST00000549094 FMN1Q68DA7 1419 aa19.33■□□□□ 0.68
SMPDL3B-206ENST00000549094 MAPKBP1O60336 1514 aa19.31■□□□□ 0.68
SMPDL3B-206ENST00000549094 SUPT16HQ9Y5B9 1047 aaKnown RBP19.29■□□□□ 0.68
SMPDL3B-206ENST00000549094 KIF13AQ9H1H9 1805 aa19.28■□□□□ 0.68
SMPDL3B-206ENST00000549094 UHRF1BP1LA0JNW5 1464 aa19.27■□□□□ 0.68
SMPDL3B-206ENST00000549094 NPM1P06748 294 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMPDL3B-206ENST00000549094 RAB3GAP2Q9H2M9 1393 aa19.25■□□□□ 0.67
SMPDL3B-206ENST00000549094 SETD5Q9C0A6 1442 aa19.24■□□□□ 0.67
SMPDL3B-206ENST00000549094 ABCC2Q92887 1545 aa19.23■□□□□ 0.67
SMPDL3B-206ENST00000549094 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
SMPDL3B-206ENST00000549094 LRRC9Q6ZRR7 1453 aa19.23■□□□□ 0.67
SMPDL3B-206ENST00000549094 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
SMPDL3B-206ENST00000549094 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
SMPDL3B-206ENST00000549094 ABCA8O94911 1581 aa19.21■□□□□ 0.67
SMPDL3B-206ENST00000549094 RAPGEF6Q8TEU7 1601 aa19.21■□□□□ 0.67
SMPDL3B-206ENST00000549094 PCF11O94913 1555 aaKnown RBP19.2■□□□□ 0.66
SMPDL3B-206ENST00000549094 ATP1B4Q9UN42 357 aaPredicted RBP19.2■□□□□ 0.66
SMPDL3B-206ENST00000549094 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
SMPDL3B-206ENST00000549094 FYCO1Q9BQS8 1478 aa19.19■□□□□ 0.66
SMPDL3B-206ENST00000549094 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
SMPDL3B-206ENST00000549094 HECW1Q76N89 1606 aa19.17■□□□□ 0.66
SMPDL3B-206ENST00000549094 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
SMPDL3B-206ENST00000549094 KDM5BQ9UGL1 1544 aa19.16■□□□□ 0.66
SMPDL3B-206ENST00000549094 ZCCHC11Q5TAX3 1644 aaKnown RBP19.14■□□□□ 0.65
SMPDL3B-206ENST00000549094 NUP153P49790 1475 aaKnown RBP19.14■□□□□ 0.65
SMPDL3B-206ENST00000549094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.13■□□□□ 0.65
SMPDL3B-206ENST00000549094 ARID3CA6NKF2 412 aa19.11■□□□□ 0.65
SMPDL3B-206ENST00000549094 CCDC18Q5T9S5 1454 aa19.1■□□□□ 0.65
SMPDL3B-206ENST00000549094 EPRSP07814 1512 aaKnown RBP19.1■□□□□ 0.65
SMPDL3B-206ENST00000549094 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
SMPDL3B-206ENST00000549094 PHLDB1Q86UU1 1377 aa19.08■□□□□ 0.65
SMPDL3B-206ENST00000549094 ITGAEP38570 1179 aa19.08■□□□□ 0.65
SMPDL3B-206ENST00000549094 GLI2P10070 1586 aa19.07■□□□□ 0.64
SMPDL3B-206ENST00000549094 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
SMPDL3B-206ENST00000549094 FAM69CQ0P6D2 419 aa19.07■□□□□ 0.64
SMPDL3B-206ENST00000549094 ATP10BO94823 1461 aa19.07■□□□□ 0.64
SMPDL3B-206ENST00000549094 CDK13Q14004 1512 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms