RNA–Protein interactions for RNA: ENST00000549038.5

RNF41-206, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-206ENST00000549038 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
RNF41-206ENST00000549038 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
RNF41-206ENST00000549038 RANGAP1P46060 587 aaPredicted RBP16.56■□□□□ 0.24
RNF41-206ENST00000549038 CLIP1P30622 1438 aa16.55■□□□□ 0.24
RNF41-206ENST00000549038 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
RNF41-206ENST00000549038 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
RNF41-206ENST00000549038 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
RNF41-206ENST00000549038 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
RNF41-206ENST00000549038 NUP160Q12769 1436 aa16.43■□□□□ 0.22
RNF41-206ENST00000549038 CTTNBP2Q8WZ74 1663 aa16.4■□□□□ 0.22
RNF41-206ENST00000549038 ARHGAP35Q9NRY4 1499 aa16.4■□□□□ 0.22
RNF41-206ENST00000549038 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
RNF41-206ENST00000549038 P3H3Q8IVL6 736 aa16.39■□□□□ 0.21
RNF41-206ENST00000549038 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
RNF41-206ENST00000549038 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
RNF41-206ENST00000549038 IQGAP2Q13576 1575 aa16.37■□□□□ 0.21
RNF41-206ENST00000549038 CEP170Q5SW79 1584 aa16.37■□□□□ 0.21
RNF41-206ENST00000549038 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
RNF41-206ENST00000549038 CHD1O14646 1710 aa16.32■□□□□ 0.2
RNF41-206ENST00000549038 UGGT2Q9NYU1 1516 aa16.32■□□□□ 0.2
RNF41-206ENST00000549038 APLP2Q06481 763 aa16.31■□□□□ 0.2
RNF41-206ENST00000549038 FHOD3Q2V2M9 1422 aa16.29■□□□□ 0.2
RNF41-206ENST00000549038 SAMD9Q5K651 1589 aa16.28■□□□□ 0.2
RNF41-206ENST00000549038 FMN1Q68DA7 1419 aa16.27■□□□□ 0.19
RNF41-206ENST00000549038 CARMIL2Q6F5E8 1435 aa16.27■□□□□ 0.19
RNF41-206ENST00000549038 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
RNF41-206ENST00000549038 DISP1Q96F81 1524 aa16.24■□□□□ 0.19
RNF41-206ENST00000549038 PRG4Q92954 1404 aaPredicted RBP16.24■□□□□ 0.19
RNF41-206ENST00000549038 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
RNF41-206ENST00000549038 CLASP1Q7Z460 1538 aa16.21■□□□□ 0.19
RNF41-206ENST00000549038 ATP1B4Q9UN42 357 aaPredicted RBP16.21■□□□□ 0.19
RNF41-206ENST00000549038 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
RNF41-206ENST00000549038 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
RNF41-206ENST00000549038 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
RNF41-206ENST00000549038 FYCO1Q9BQS8 1478 aa16.18■□□□□ 0.18
RNF41-206ENST00000549038 TRIM26Q12899 539 aaPredicted RBP16.18■□□□□ 0.18
RNF41-206ENST00000549038 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
RNF41-206ENST00000549038 SHROOM2Q13796 1616 aa16.16■□□□□ 0.18
RNF41-206ENST00000549038 MAP3K1Q13233 1512 aa16.15■□□□□ 0.18
RNF41-206ENST00000549038 PTPRGP23470 1445 aa16.15■□□□□ 0.18
RNF41-206ENST00000549038 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
RNF41-206ENST00000549038 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
RNF41-206ENST00000549038 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
RNF41-206ENST00000549038 TIAM1Q13009 1591 aa16.07■□□□□ 0.16
RNF41-206ENST00000549038 ERCC6L2Q5T890 1561 aa16.07■□□□□ 0.16
RNF41-206ENST00000549038 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
RNF41-206ENST00000549038 HECW1Q76N89 1606 aa16.05■□□□□ 0.16
RNF41-206ENST00000549038 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
RNF41-206ENST00000549038 PCGF6Q9BYE7 350 aa16.05■□□□□ 0.16
RNF41-206ENST00000549038 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
RNF41-206ENST00000549038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
RNF41-206ENST00000549038 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
RNF41-206ENST00000549038 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
RNF41-206ENST00000549038 UACAQ9BZF9 1416 aa16.02■□□□□ 0.16
RNF41-206ENST00000549038 EPRSP07814 1512 aaKnown RBP16.02■□□□□ 0.15
RNF41-206ENST00000549038 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.15
RNF41-206ENST00000549038 CDK11AQ9UQ88 783 aaPredicted RBP16.01■□□□□ 0.15
RNF41-206ENST00000549038 NUP153P49790 1475 aaKnown RBP16.01■□□□□ 0.15
RNF41-206ENST00000549038 RAPGEF6Q8TEU7 1601 aa16.01■□□□□ 0.15
RNF41-206ENST00000549038 ABCA8O94911 1581 aa16■□□□□ 0.15
RNF41-206ENST00000549038 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
RNF41-206ENST00000549038 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
RNF41-206ENST00000549038 ATP10BO94823 1461 aa15.95■□□□□ 0.14
RNF41-206ENST00000549038 CDK13Q14004 1512 aaKnown RBP15.94■□□□□ 0.14
RNF41-206ENST00000549038 UHRF1BP1LA0JNW5 1464 aa15.94■□□□□ 0.14
RNF41-206ENST00000549038 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
RNF41-206ENST00000549038 ABCC2Q92887 1545 aa15.92■□□□□ 0.14
RNF41-206ENST00000549038 LRRIQ1Q96JM4 1722 aa15.9■□□□□ 0.14
RNF41-206ENST00000549038 RRBP1Q9P2E9 1410 aaKnown RBP15.88■□□□□ 0.13
RNF41-206ENST00000549038 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
RNF41-206ENST00000549038 MAGI3Q5TCQ9 1506 aa15.87■□□□□ 0.13
RNF41-206ENST00000549038 TROQ12816 1431 aaPredicted RBP15.86■□□□□ 0.13
RNF41-206ENST00000549038 CCNB3Q8WWL7 1395 aa15.86■□□□□ 0.13
RNF41-206ENST00000549038 KDM5BQ9UGL1 1544 aa15.85■□□□□ 0.13
RNF41-206ENST00000549038 PHLDB1Q86UU1 1377 aa15.85■□□□□ 0.13
RNF41-206ENST00000549038 NCOA2Q15596 1464 aa15.84■□□□□ 0.13
RNF41-206ENST00000549038 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
RNF41-206ENST00000549038 ADCY10Q96PN6 1610 aa15.8■□□□□ 0.12
RNF41-206ENST00000549038 MYOM3Q5VTT5 1437 aa15.8■□□□□ 0.12
RNF41-206ENST00000549038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.8■□□□□ 0.12
RNF41-206ENST00000549038 KCNH8Q96L42 1107 aa15.79■□□□□ 0.12
RNF41-206ENST00000549038 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
RNF41-206ENST00000549038 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.12
RNF41-206ENST00000549038 FAM50AQ14320 339 aaKnown RBP15.77■□□□□ 0.12
RNF41-206ENST00000549038 MIA2Q96PC5 1412 aa15.76■□□□□ 0.11
RNF41-206ENST00000549038 ZCCHC11Q5TAX3 1644 aaKnown RBP15.76■□□□□ 0.11
RNF41-206ENST00000549038 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
RNF41-206ENST00000549038 KIF14Q15058 1648 aa15.72■□□□□ 0.11
RNF41-206ENST00000549038 ASXL2Q76L83 1435 aa15.72■□□□□ 0.11
RNF41-206ENST00000549038 ABCC10Q5T3U5 1492 aa15.71■□□□□ 0.11
RNF41-206ENST00000549038 GPATCH8Q9UKJ3 1502 aaKnown RBP15.71■□□□□ 0.11
RNF41-206ENST00000549038 WDR7Q9Y4E6 1490 aa15.71■□□□□ 0.1
RNF41-206ENST00000549038 ITGAEP38570 1179 aa15.69■□□□□ 0.1
RNF41-206ENST00000549038 TCOF1Q13428 1488 aaKnown RBP15.69■□□□□ 0.1
RNF41-206ENST00000549038 ZNF777Q9ULD5 760 aaPredicted RBP15.68■□□□□ 0.1
RNF41-206ENST00000549038 PTPN23Q9H3S7 1636 aa15.66■□□□□ 0.1
RNF41-206ENST00000549038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.65■□□□□ 0.1
RNF41-206ENST00000549038 ZNF644Q9H582 1327 aaPredicted RBP15.65■□□□□ 0.1
RNF41-206ENST00000549038 ITSN2Q9NZM3 1697 aa15.64■□□□□ 0.09
RNF41-206ENST00000549038 PLCH2O75038 1416 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms