RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
SCRN3-212ENST00000548868 UBTFP17480 764 aaKnown RBP18.25■□□□□ 0.51
SCRN3-212ENST00000548868 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
SCRN3-212ENST00000548868 NUP160Q12769 1436 aa18.25■□□□□ 0.51
SCRN3-212ENST00000548868 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
SCRN3-212ENST00000548868 TNIKQ9UKE5 1360 aa18.24■□□□□ 0.51
SCRN3-212ENST00000548868 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
SCRN3-212ENST00000548868 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
SCRN3-212ENST00000548868 IQGAP2Q13576 1575 aa18.19■□□□□ 0.5
SCRN3-212ENST00000548868 CLASP1Q7Z460 1538 aa18.15■□□□□ 0.5
SCRN3-212ENST00000548868 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
SCRN3-212ENST00000548868 UGGT2Q9NYU1 1516 aa18.1■□□□□ 0.49
SCRN3-212ENST00000548868 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
SCRN3-212ENST00000548868 CEP162Q5TB80 1403 aa18.09■□□□□ 0.49
SCRN3-212ENST00000548868 EFCAB5A4FU69 1503 aa18.07■□□□□ 0.48
SCRN3-212ENST00000548868 SAMD9Q5K651 1589 aa18.05■□□□□ 0.48
SCRN3-212ENST00000548868 CLIP1P30622 1438 aa18.05■□□□□ 0.48
SCRN3-212ENST00000548868 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
SCRN3-212ENST00000548868 KIAA0556O60303 1618 aa18.01■□□□□ 0.47
SCRN3-212ENST00000548868 ARHGAP35Q9NRY4 1499 aa18■□□□□ 0.47
SCRN3-212ENST00000548868 RANGAP1P46060 587 aaPredicted RBP18■□□□□ 0.47
SCRN3-212ENST00000548868 CARMIL2Q6F5E8 1435 aa17.99■□□□□ 0.47
SCRN3-212ENST00000548868 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
SCRN3-212ENST00000548868 PRG4Q92954 1404 aaPredicted RBP17.97■□□□□ 0.47
SCRN3-212ENST00000548868 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
SCRN3-212ENST00000548868 FHOD3Q2V2M9 1422 aa17.91■□□□□ 0.46
SCRN3-212ENST00000548868 ERCC6L2Q5T890 1561 aa17.9■□□□□ 0.46
SCRN3-212ENST00000548868 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
SCRN3-212ENST00000548868 FMN1Q68DA7 1419 aa17.88■□□□□ 0.45
SCRN3-212ENST00000548868 ARHGEF11O15085 1522 aa17.85■□□□□ 0.45
SCRN3-212ENST00000548868 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
SCRN3-212ENST00000548868 POTEDQ86YR6 584 aa17.83■□□□□ 0.45
SCRN3-212ENST00000548868 PTPRGP23470 1445 aa17.82■□□□□ 0.44
SCRN3-212ENST00000548868 RIMBP3CA6NJZ7 1639 aa17.82■□□□□ 0.44
SCRN3-212ENST00000548868 RIMBP3BA6NNM3 1639 aa17.82■□□□□ 0.44
SCRN3-212ENST00000548868 RIMBP3Q9UFD9 1639 aa17.82■□□□□ 0.44
SCRN3-212ENST00000548868 RAPGEF6Q8TEU7 1601 aa17.79■□□□□ 0.44
SCRN3-212ENST00000548868 PCF11O94913 1555 aaKnown RBP17.79■□□□□ 0.44
SCRN3-212ENST00000548868 CASKIN1Q8WXD9 1431 aa17.77■□□□□ 0.44
SCRN3-212ENST00000548868 FYCO1Q9BQS8 1478 aa17.77■□□□□ 0.44
SCRN3-212ENST00000548868 ABCA8O94911 1581 aa17.77■□□□□ 0.44
SCRN3-212ENST00000548868 HECW1Q76N89 1606 aa17.76■□□□□ 0.43
SCRN3-212ENST00000548868 TTBK1Q5TCY1 1321 aaPredicted RBP17.75■□□□□ 0.43
SCRN3-212ENST00000548868 PLB1Q6P1J6 1458 aa17.73■□□□□ 0.43
SCRN3-212ENST00000548868 UACAQ9BZF9 1416 aa17.73■□□□□ 0.43
SCRN3-212ENST00000548868 MSH5O43196 834 aa17.71■□□□□ 0.43
SCRN3-212ENST00000548868 ABCC2Q92887 1545 aa17.71■□□□□ 0.43
SCRN3-212ENST00000548868 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
SCRN3-212ENST00000548868 LRRIQ1Q96JM4 1722 aa17.71■□□□□ 0.42
SCRN3-212ENST00000548868 PIAS4Q8N2W9 510 aaPredicted RBP17.69■□□□□ 0.42
SCRN3-212ENST00000548868 NUP153P49790 1475 aaKnown RBP17.68■□□□□ 0.42
SCRN3-212ENST00000548868 CCDC18Q5T9S5 1454 aa17.68■□□□□ 0.42
SCRN3-212ENST00000548868 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
SCRN3-212ENST00000548868 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
SCRN3-212ENST00000548868 ADCY10Q96PN6 1610 aa17.67■□□□□ 0.42
SCRN3-212ENST00000548868 EPRSP07814 1512 aaKnown RBP17.65■□□□□ 0.42
SCRN3-212ENST00000548868 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
SCRN3-212ENST00000548868 ATP1B4Q9UN42 357 aaPredicted RBP17.65■□□□□ 0.42
SCRN3-212ENST00000548868 TIAM1Q13009 1591 aa17.64■□□□□ 0.41
SCRN3-212ENST00000548868 APLP2Q06481 763 aa17.64■□□□□ 0.41
SCRN3-212ENST00000548868 KDM5BQ9UGL1 1544 aa17.62■□□□□ 0.41
SCRN3-212ENST00000548868 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
SCRN3-212ENST00000548868 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
SCRN3-212ENST00000548868 ADRA2BP18089 450 aa17.6■□□□□ 0.41
SCRN3-212ENST00000548868 ATP10BO94823 1461 aa17.6■□□□□ 0.41
SCRN3-212ENST00000548868 CDK13Q14004 1512 aaKnown RBP17.6■□□□□ 0.41
SCRN3-212ENST00000548868 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.41
SCRN3-212ENST00000548868 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
SCRN3-212ENST00000548868 LRRC9Q6ZRR7 1453 aa17.54■□□□□ 0.4
SCRN3-212ENST00000548868 ARID3CA6NKF2 412 aa17.53■□□□□ 0.4
SCRN3-212ENST00000548868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
SCRN3-212ENST00000548868 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
SCRN3-212ENST00000548868 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
SCRN3-212ENST00000548868 EHBP1L1Q8N3D4 1523 aa17.53■□□□□ 0.4
SCRN3-212ENST00000548868 MTUS2Q5JR59 1369 aa17.51■□□□□ 0.39
SCRN3-212ENST00000548868 MAGI3Q5TCQ9 1506 aa17.5■□□□□ 0.39
SCRN3-212ENST00000548868 PLEKHD1A6NEE1 506 aa17.49■□□□□ 0.39
SCRN3-212ENST00000548868 TROQ12816 1431 aaPredicted RBP17.48■□□□□ 0.39
SCRN3-212ENST00000548868 SUPT6HQ7KZ85 1726 aaKnown RBP17.48■□□□□ 0.39
SCRN3-212ENST00000548868 MAPKBP1O60336 1514 aa17.48■□□□□ 0.39
SCRN3-212ENST00000548868 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
SCRN3-212ENST00000548868 KIF14Q15058 1648 aa17.45■□□□□ 0.38
SCRN3-212ENST00000548868 WDR7Q9Y4E6 1490 aa17.45■□□□□ 0.38
SCRN3-212ENST00000548868 ASXL2Q76L83 1435 aa17.44■□□□□ 0.38
SCRN3-212ENST00000548868 PPARGC1BQ86YN6 1023 aaKnown RBP17.4■□□□□ 0.38
SCRN3-212ENST00000548868 NCOA2Q15596 1464 aa17.4■□□□□ 0.38
SCRN3-212ENST00000548868 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
SCRN3-212ENST00000548868 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
SCRN3-212ENST00000548868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCRN3-212ENST00000548868 ABCA9Q8IUA7 1624 aa17.35■□□□□ 0.37
SCRN3-212ENST00000548868 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
SCRN3-212ENST00000548868 MYO5CQ9NQX4 1742 aa17.34■□□□□ 0.37
SCRN3-212ENST00000548868 GLI2P10070 1586 aa17.33■□□□□ 0.37
SCRN3-212ENST00000548868 TTC37Q6PGP7 1564 aa17.33■□□□□ 0.37
SCRN3-212ENST00000548868 KCNH8Q96L42 1107 aa17.33■□□□□ 0.37
SCRN3-212ENST00000548868 DIP2BQ9P265 1576 aa17.32■□□□□ 0.36
SCRN3-212ENST00000548868 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
SCRN3-212ENST00000548868 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
SCRN3-212ENST00000548868 PREX2Q70Z35 1606 aa17.31■□□□□ 0.36
SCRN3-212ENST00000548868 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms