RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 PRG4Q92954 1404 aaPredicted RBP28.09■■■□□ 2.09
RAPGEF3-217ENST00000548434 CUL7Q14999 1698 aa28.06■■■□□ 2.08
RAPGEF3-217ENST00000548434 KIAA0586Q9BVV6 1533 aa28.01■■■□□ 2.07
RAPGEF3-217ENST00000548434 CARMIL1Q5VZK9 1371 aa27.95■■■□□ 2.06
RAPGEF3-217ENST00000548434 KIF13AQ9H1H9 1805 aa27.85■■■□□ 2.05
RAPGEF3-217ENST00000548434 ADCY10Q96PN6 1610 aa27.82■■■□□ 2.04
RAPGEF3-217ENST00000548434 MAPKBP1O60336 1514 aa27.73■■■□□ 2.03
RAPGEF3-217ENST00000548434 IQGAP2Q13576 1575 aa27.72■■■□□ 2.03
RAPGEF3-217ENST00000548434 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.02
RAPGEF3-217ENST00000548434 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.02
RAPGEF3-217ENST00000548434 DISP1Q96F81 1524 aa27.67■■■□□ 2.02
RAPGEF3-217ENST00000548434 PTPRGP23470 1445 aa27.66■■■□□ 2.02
RAPGEF3-217ENST00000548434 TNIKQ9UKE5 1360 aa27.64■■■□□ 2.02
RAPGEF3-217ENST00000548434 DIP2BQ9P265 1576 aa27.63■■■□□ 2.01
RAPGEF3-217ENST00000548434 UGGT2Q9NYU1 1516 aa27.62■■■□□ 2.01
RAPGEF3-217ENST00000548434 CARMIL2Q6F5E8 1435 aa27.6■■■□□ 2.01
RAPGEF3-217ENST00000548434 NPM1P06748 294 aaKnown RBP eCLIP27.58■■■□□ 2.01
RAPGEF3-217ENST00000548434 FAM69CQ0P6D2 419 aa27.56■■■□□ 2
RAPGEF3-217ENST00000548434 UHRF1BP1LA0JNW5 1464 aa27.56■■■□□ 2
RAPGEF3-217ENST00000548434 PRXQ9BXM0 1461 aa27.56■■■□□ 2
RAPGEF3-217ENST00000548434 ABCC2Q92887 1545 aa27.53■■■□□ 2
RAPGEF3-217ENST00000548434 KIAA0556O60303 1618 aa27.49■■□□□ 1.99
RAPGEF3-217ENST00000548434 UACAQ9BZF9 1416 aa27.48■■□□□ 1.99
RAPGEF3-217ENST00000548434 CTTNBP2Q8WZ74 1663 aa27.47■■□□□ 1.99
RAPGEF3-217ENST00000548434 KDM5BQ9UGL1 1544 aa27.44■■□□□ 1.98
RAPGEF3-217ENST00000548434 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
RAPGEF3-217ENST00000548434 ASXL2Q76L83 1435 aa27.41■■□□□ 1.98
RAPGEF3-217ENST00000548434 GLI2P10070 1586 aa27.39■■□□□ 1.97
RAPGEF3-217ENST00000548434 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
RAPGEF3-217ENST00000548434 PLB1Q6P1J6 1458 aa27.38■■□□□ 1.97
RAPGEF3-217ENST00000548434 PPRC1Q5VV67 1664 aaKnown RBP27.36■■□□□ 1.97
RAPGEF3-217ENST00000548434 ZCCHC11Q5TAX3 1644 aaKnown RBP27.33■■□□□ 1.97
RAPGEF3-217ENST00000548434 GOLGA3Q08378 1498 aa27.29■■□□□ 1.96
RAPGEF3-217ENST00000548434 ABCA8O94911 1581 aa27.29■■□□□ 1.96
RAPGEF3-217ENST00000548434 CSRNP3Q8WYN3 585 aa27.28■■□□□ 1.96
RAPGEF3-217ENST00000548434 EPRSP07814 1512 aaKnown RBP27.27■■□□□ 1.96
RAPGEF3-217ENST00000548434 KDM6BO15054 1643 aa27.25■■□□□ 1.95
RAPGEF3-217ENST00000548434 MAP3K4Q9Y6R4 1608 aa27.23■■□□□ 1.95
RAPGEF3-217ENST00000548434 EEA1Q15075 1411 aa27.17■■□□□ 1.94
RAPGEF3-217ENST00000548434 COL17A1Q9UMD9 1497 aaPredicted RBP27.16■■□□□ 1.94
RAPGEF3-217ENST00000548434 SAMD9Q5K651 1589 aa27.16■■□□□ 1.94
RAPGEF3-217ENST00000548434 WDR7Q9Y4E6 1490 aa27.15■■□□□ 1.94
RAPGEF3-217ENST00000548434 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
RAPGEF3-217ENST00000548434 ATP10BO94823 1461 aa27.06■■□□□ 1.92
RAPGEF3-217ENST00000548434 KDM4FA0A1W2PPD8 638 aa27.05■■□□□ 1.92
RAPGEF3-217ENST00000548434 P3H3Q8IVL6 736 aa27.05■■□□□ 1.92
RAPGEF3-217ENST00000548434 CFAP43Q8NDM7 1665 aa27.01■■□□□ 1.92
RAPGEF3-217ENST00000548434 MAGI3Q5TCQ9 1506 aa27■■□□□ 1.91
RAPGEF3-217ENST00000548434 TEX14Q8IWB6 1497 aa27■■□□□ 1.91
RAPGEF3-217ENST00000548434 KIF21BO75037 1637 aa27■■□□□ 1.91
RAPGEF3-217ENST00000548434 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
RAPGEF3-217ENST00000548434 CD109Q6YHK3 1445 aa26.96■■□□□ 1.91
RAPGEF3-217ENST00000548434 RAPGEF6Q8TEU7 1601 aa26.95■■□□□ 1.91
RAPGEF3-217ENST00000548434 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
RAPGEF3-217ENST00000548434 KCNH8Q96L42 1107 aa26.94■■□□□ 1.9
RAPGEF3-217ENST00000548434 NUP153P49790 1475 aaKnown RBP26.91■■□□□ 1.9
RAPGEF3-217ENST00000548434 FHOD3Q2V2M9 1422 aa26.89■■□□□ 1.89
RAPGEF3-217ENST00000548434 ABCA9Q8IUA7 1624 aa26.87■■□□□ 1.89
RAPGEF3-217ENST00000548434 ARID3CA6NKF2 412 aa26.86■■□□□ 1.89
RAPGEF3-217ENST00000548434 EFCAB5A4FU69 1503 aa26.83■■□□□ 1.89
RAPGEF3-217ENST00000548434 ARAP3Q8WWN8 1544 aa26.8■■□□□ 1.88
RAPGEF3-217ENST00000548434 RANGAP1P46060 587 aaPredicted RBP26.77■■□□□ 1.88
RAPGEF3-217ENST00000548434 ADGRL1O94910 1474 aa26.76■■□□□ 1.87
RAPGEF3-217ENST00000548434 PHLDB1Q86UU1 1377 aa26.71■■□□□ 1.87
RAPGEF3-217ENST00000548434 ARHGAP35Q9NRY4 1499 aa26.68■■□□□ 1.86
RAPGEF3-217ENST00000548434 NEO1Q92859 1461 aa26.67■■□□□ 1.86
RAPGEF3-217ENST00000548434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.63■■□□□ 1.85
RAPGEF3-217ENST00000548434 FRMPD1Q5SYB0 1578 aa26.63■■□□□ 1.85
RAPGEF3-217ENST00000548434 PLEKHD1A6NEE1 506 aa26.62■■□□□ 1.85
RAPGEF3-217ENST00000548434 UBTFP17480 764 aaKnown RBP26.62■■□□□ 1.85
RAPGEF3-217ENST00000548434 CDK13Q14004 1512 aaKnown RBP26.61■■□□□ 1.85
RAPGEF3-217ENST00000548434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.61■■□□□ 1.85
RAPGEF3-217ENST00000548434 HNRNPUL2Q1KMD3 747 aaKnown RBP26.61■■□□□ 1.85
RAPGEF3-217ENST00000548434 RAPGEF3O95398 923 aa26.58■■□□□ 1.85
RAPGEF3-217ENST00000548434 EHMT2Q96KQ7 1210 aa26.58■■□□□ 1.85
RAPGEF3-217ENST00000548434 TTC37Q6PGP7 1564 aa26.57■■□□□ 1.84
RAPGEF3-217ENST00000548434 FMN1Q68DA7 1419 aa26.56■■□□□ 1.84
RAPGEF3-217ENST00000548434 LRRIQ1Q96JM4 1722 aa26.53■■□□□ 1.84
RAPGEF3-217ENST00000548434 RICTORQ6R327 1708 aa26.52■■□□□ 1.84
RAPGEF3-217ENST00000548434 AKNAQ7Z591 1439 aa26.5■■□□□ 1.83
RAPGEF3-217ENST00000548434 HECW1Q76N89 1606 aa26.49■■□□□ 1.83
RAPGEF3-217ENST00000548434 FANCAO15360 1455 aa26.48■■□□□ 1.83
RAPGEF3-217ENST00000548434 ADAMTSL3P82987 1691 aa26.46■■□□□ 1.83
RAPGEF3-217ENST00000548434 PLCH2O75038 1416 aa26.45■■□□□ 1.82
RAPGEF3-217ENST00000548434 DENND4BO75064 1496 aaPredicted RBP26.44■■□□□ 1.82
RAPGEF3-217ENST00000548434 CFAP74Q9C0B2 1584 aa26.44■■□□□ 1.82
RAPGEF3-217ENST00000548434 ZMYM4Q5VZL5 1548 aa26.4■■□□□ 1.82
RAPGEF3-217ENST00000548434 KIF14Q15058 1648 aa26.39■■□□□ 1.82
RAPGEF3-217ENST00000548434 BCORL1Q5H9F3 1711 aa26.38■■□□□ 1.81
RAPGEF3-217ENST00000548434 ARHGEF40Q8TER5 1519 aa26.38■■□□□ 1.81
RAPGEF3-217ENST00000548434 TROQ12816 1431 aaPredicted RBP26.38■■□□□ 1.81
RAPGEF3-217ENST00000548434 SIGLEC1Q9BZZ2 1709 aa26.36■■□□□ 1.81
RAPGEF3-217ENST00000548434 CASKIN1Q8WXD9 1431 aa26.36■■□□□ 1.81
RAPGEF3-217ENST00000548434 HECW2Q9P2P5 1572 aa26.36■■□□□ 1.81
RAPGEF3-217ENST00000548434 MYO5CQ9NQX4 1742 aa26.34■■□□□ 1.81
RAPGEF3-217ENST00000548434 ATP1B4Q9UN42 357 aaPredicted RBP26.33■■□□□ 1.81
RAPGEF3-217ENST00000548434 PCF11O94913 1555 aaKnown RBP26.33■■□□□ 1.8
RAPGEF3-217ENST00000548434 CDK11AQ9UQ88 783 aaPredicted RBP26.32■■□□□ 1.8
RAPGEF3-217ENST00000548434 YEATS2Q9ULM3 1422 aa26.31■■□□□ 1.8
RAPGEF3-217ENST00000548434 SCAPERQ9BY12 1400 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms