RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 KIAA0586Q9BVV6 1533 aa28.59■■■□□ 2.17
LETMD1-216ENST00000548401 IQGAP2Q13576 1575 aa28.54■■■□□ 2.16
LETMD1-216ENST00000548401 GOLGA3Q08378 1498 aa28.53■■■□□ 2.16
LETMD1-216ENST00000548401 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
LETMD1-216ENST00000548401 ARHGEF11O15085 1522 aa28.44■■■□□ 2.14
LETMD1-216ENST00000548401 RIMBP3CA6NJZ7 1639 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 RIMBP3BA6NNM3 1639 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 RIMBP3Q9UFD9 1639 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 UGGT2Q9NYU1 1516 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 JPH4Q96JJ6 628 aa28.34■■■□□ 2.13
LETMD1-216ENST00000548401 PRG4Q92954 1404 aaPredicted RBP28.34■■■□□ 2.13
LETMD1-216ENST00000548401 DISP1Q96F81 1524 aa28.31■■■□□ 2.12
LETMD1-216ENST00000548401 EHMT2Q96KQ7 1210 aa28.29■■■□□ 2.12
LETMD1-216ENST00000548401 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
LETMD1-216ENST00000548401 SAMD9Q5K651 1589 aa28.27■■■□□ 2.12
LETMD1-216ENST00000548401 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
LETMD1-216ENST00000548401 UBTFP17480 764 aaKnown RBP28.22■■■□□ 2.11
LETMD1-216ENST00000548401 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
LETMD1-216ENST00000548401 CARMIL2Q6F5E8 1435 aa28.19■■■□□ 2.1
LETMD1-216ENST00000548401 EFCAB5A4FU69 1503 aa28.18■■■□□ 2.1
LETMD1-216ENST00000548401 LOC105371045A0A1W2PR82 267 aa28.09■■■□□ 2.09
LETMD1-216ENST00000548401 ARHGAP35Q9NRY4 1499 aa28.08■■■□□ 2.09
LETMD1-216ENST00000548401 FHOD3Q2V2M9 1422 aa28.02■■■□□ 2.08
LETMD1-216ENST00000548401 PTPRGP23470 1445 aa28.01■■■□□ 2.08
LETMD1-216ENST00000548401 CEP162Q5TB80 1403 aa28.01■■■□□ 2.07
LETMD1-216ENST00000548401 RANGAP1P46060 587 aaPredicted RBP28■■■□□ 2.07
LETMD1-216ENST00000548401 CLIP1P30622 1438 aa28■■■□□ 2.07
LETMD1-216ENST00000548401 CYB5RLQ6IPT4 315 aa27.96■■■□□ 2.07
LETMD1-216ENST00000548401 ADCY10Q96PN6 1610 aa27.96■■■□□ 2.07
LETMD1-216ENST00000548401 ABCA8O94911 1581 aa27.94■■■□□ 2.06
LETMD1-216ENST00000548401 P3H3Q8IVL6 736 aa27.94■■■□□ 2.06
LETMD1-216ENST00000548401 ABCC2Q92887 1545 aa27.91■■■□□ 2.06
LETMD1-216ENST00000548401 PLB1Q6P1J6 1458 aa27.9■■■□□ 2.06
LETMD1-216ENST00000548401 UHRF1BP1LA0JNW5 1464 aa27.89■■■□□ 2.06
LETMD1-216ENST00000548401 UACAQ9BZF9 1416 aa27.88■■■□□ 2.05
LETMD1-216ENST00000548401 RAPGEF6Q8TEU7 1601 aa27.86■■■□□ 2.05
LETMD1-216ENST00000548401 TTBK1Q5TCY1 1321 aaPredicted RBP27.86■■■□□ 2.05
LETMD1-216ENST00000548401 FMN1Q68DA7 1419 aa27.83■■■□□ 2.05
LETMD1-216ENST00000548401 PCF11O94913 1555 aaKnown RBP27.79■■■□□ 2.04
LETMD1-216ENST00000548401 KDM5BQ9UGL1 1544 aa27.77■■■□□ 2.04
LETMD1-216ENST00000548401 NUP153P49790 1475 aaKnown RBP27.76■■■□□ 2.04
LETMD1-216ENST00000548401 ZCCHC11Q5TAX3 1644 aaKnown RBP27.74■■■□□ 2.03
LETMD1-216ENST00000548401 HECW1Q76N89 1606 aa27.73■■■□□ 2.03
LETMD1-216ENST00000548401 CASKIN1Q8WXD9 1431 aa27.69■■■□□ 2.02
LETMD1-216ENST00000548401 LRRIQ1Q96JM4 1722 aa27.69■■■□□ 2.02
LETMD1-216ENST00000548401 FYCO1Q9BQS8 1478 aa27.69■■■□□ 2.02
LETMD1-216ENST00000548401 MAPKBP1O60336 1514 aa27.68■■■□□ 2.02
LETMD1-216ENST00000548401 VPS8Q8N3P4 1428 aa27.65■■■□□ 2.02
LETMD1-216ENST00000548401 ATP10BO94823 1461 aa27.64■■■□□ 2.01
LETMD1-216ENST00000548401 EPRSP07814 1512 aaKnown RBP27.61■■■□□ 2.01
LETMD1-216ENST00000548401 CDK13Q14004 1512 aaKnown RBP27.61■■■□□ 2.01
LETMD1-216ENST00000548401 ASXL2Q76L83 1435 aa27.55■■■□□ 2
LETMD1-216ENST00000548401 CCDC18Q5T9S5 1454 aa27.55■■■□□ 2
LETMD1-216ENST00000548401 NPM1P06748 294 aaKnown RBP eCLIP27.53■■■□□ 2
LETMD1-216ENST00000548401 ARID3CA6NKF2 412 aa27.52■■■□□ 2
LETMD1-216ENST00000548401 WDR7Q9Y4E6 1490 aa27.51■■■□□ 2
LETMD1-216ENST00000548401 CFAP43Q8NDM7 1665 aa27.5■■□□□ 1.99
LETMD1-216ENST00000548401 DIP2BQ9P265 1576 aa27.5■■□□□ 1.99
LETMD1-216ENST00000548401 KIF13AQ9H1H9 1805 aa27.46■■□□□ 1.99
LETMD1-216ENST00000548401 ABCC10Q5T3U5 1492 aa27.44■■□□□ 1.98
LETMD1-216ENST00000548401 MAGI3Q5TCQ9 1506 aa27.43■■□□□ 1.98
LETMD1-216ENST00000548401 ATP1B4Q9UN42 357 aaPredicted RBP27.43■■□□□ 1.98
LETMD1-216ENST00000548401 TIAM1Q13009 1591 aa27.42■■□□□ 1.98
LETMD1-216ENST00000548401 GLI2P10070 1586 aa27.39■■□□□ 1.98
LETMD1-216ENST00000548401 MAP3K1Q13233 1512 aa27.38■■□□□ 1.97
LETMD1-216ENST00000548401 TROQ12816 1431 aaPredicted RBP27.35■■□□□ 1.97
LETMD1-216ENST00000548401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
LETMD1-216ENST00000548401 HNRNPUL2Q1KMD3 747 aaKnown RBP27.35■■□□□ 1.97
LETMD1-216ENST00000548401 KIF14Q15058 1648 aa27.33■■□□□ 1.97
LETMD1-216ENST00000548401 ABCA9Q8IUA7 1624 aa27.32■■□□□ 1.96
LETMD1-216ENST00000548401 MAP3K4Q9Y6R4 1608 aa27.32■■□□□ 1.96
LETMD1-216ENST00000548401 EHBP1L1Q8N3D4 1523 aa27.31■■□□□ 1.96
LETMD1-216ENST00000548401 TTC37Q6PGP7 1564 aa27.29■■□□□ 1.96
LETMD1-216ENST00000548401 PLEKHD1A6NEE1 506 aa27.28■■□□□ 1.96
LETMD1-216ENST00000548401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.27■■□□□ 1.96
LETMD1-216ENST00000548401 CDK11AQ9UQ88 783 aaPredicted RBP27.26■■□□□ 1.95
LETMD1-216ENST00000548401 PPRC1Q5VV67 1664 aaKnown RBP27.24■■□□□ 1.95
LETMD1-216ENST00000548401 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
LETMD1-216ENST00000548401 FAM69CQ0P6D2 419 aa27.23■■□□□ 1.95
LETMD1-216ENST00000548401 MTUS2Q5JR59 1369 aa27.21■■□□□ 1.95
LETMD1-216ENST00000548401 KCNH8Q96L42 1107 aa27.2■■□□□ 1.94
LETMD1-216ENST00000548401 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
LETMD1-216ENST00000548401 SUPT6HQ7KZ85 1726 aaKnown RBP27.16■■□□□ 1.94
LETMD1-216ENST00000548401 TSPOAP1O95153 1857 aa27.16■■□□□ 1.94
LETMD1-216ENST00000548401 MYO5CQ9NQX4 1742 aa27.15■■□□□ 1.94
LETMD1-216ENST00000548401 CD109Q6YHK3 1445 aa27.14■■□□□ 1.93
LETMD1-216ENST00000548401 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
LETMD1-216ENST00000548401 PREX2Q70Z35 1606 aa27.12■■□□□ 1.93
LETMD1-216ENST00000548401 CDC42BPAQ5VT25 1732 aa27.12■■□□□ 1.93
LETMD1-216ENST00000548401 ARAP3Q8WWN8 1544 aa27.11■■□□□ 1.93
LETMD1-216ENST00000548401 NCOA2Q15596 1464 aa27.1■■□□□ 1.93
LETMD1-216ENST00000548401 APLP2Q06481 763 aa27.08■■□□□ 1.93
LETMD1-216ENST00000548401 CDC42BPBQ9Y5S2 1711 aa27.07■■□□□ 1.92
LETMD1-216ENST00000548401 TEX14Q8IWB6 1497 aa27.06■■□□□ 1.92
LETMD1-216ENST00000548401 PLCH2O75038 1416 aa27.05■■□□□ 1.92
LETMD1-216ENST00000548401 ITSN2Q9NZM3 1697 aa27.05■■□□□ 1.92
LETMD1-216ENST00000548401 CFAP74Q9C0B2 1584 aa27.03■■□□□ 1.92
LETMD1-216ENST00000548401 GPATCH8Q9UKJ3 1502 aaKnown RBP27.03■■□□□ 1.92
LETMD1-216ENST00000548401 ARHGAP5Q13017 1502 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms