RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 OSCARQ8IYS5 282 aa27.89■■■□□ 2.06
KRT4-201ENST00000548097 RANGAP1P46060 587 aaPredicted RBP27.88■■■□□ 2.05
KRT4-201ENST00000548097 CTTNBP2Q8WZ74 1663 aa27.85■■■□□ 2.05
KRT4-201ENST00000548097 KIAA0586Q9BVV6 1533 aa27.8■■■□□ 2.04
KRT4-201ENST00000548097 CLASP1Q7Z460 1538 aa27.79■■■□□ 2.04
KRT4-201ENST00000548097 IQGAP2Q13576 1575 aa27.77■■■□□ 2.04
KRT4-201ENST00000548097 TNIKQ9UKE5 1360 aa27.77■■■□□ 2.04
KRT4-201ENST00000548097 JPH4Q96JJ6 628 aa27.71■■■□□ 2.03
KRT4-201ENST00000548097 P3H3Q8IVL6 736 aa27.63■■■□□ 2.01
KRT4-201ENST00000548097 SHROOM2Q13796 1616 aa27.62■■■□□ 2.01
KRT4-201ENST00000548097 CEP162Q5TB80 1403 aa27.61■■■□□ 2.01
KRT4-201ENST00000548097 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
KRT4-201ENST00000548097 PRG4Q92954 1404 aaPredicted RBP27.6■■■□□ 2.01
KRT4-201ENST00000548097 UGGT2Q9NYU1 1516 aa27.6■■■□□ 2.01
KRT4-201ENST00000548097 CLIP1P30622 1438 aa27.57■■■□□ 2
KRT4-201ENST00000548097 DISP1Q96F81 1524 aa27.56■■■□□ 2
KRT4-201ENST00000548097 TTBK1Q5TCY1 1321 aaPredicted RBP27.55■■■□□ 2
KRT4-201ENST00000548097 ARHGAP35Q9NRY4 1499 aa27.54■■■□□ 2
KRT4-201ENST00000548097 SAMD9Q5K651 1589 aa27.51■■■□□ 2
KRT4-201ENST00000548097 KIAA0556O60303 1618 aa27.51■■□□□ 1.99
KRT4-201ENST00000548097 FHOD3Q2V2M9 1422 aa27.49■■□□□ 1.99
KRT4-201ENST00000548097 CARMIL2Q6F5E8 1435 aa27.47■■□□□ 1.99
KRT4-201ENST00000548097 EFCAB5A4FU69 1503 aa27.45■■□□□ 1.99
KRT4-201ENST00000548097 ARHGEF11O15085 1522 aa27.45■■□□□ 1.99
KRT4-201ENST00000548097 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
KRT4-201ENST00000548097 RIMBP3CA6NJZ7 1639 aa27.4■■□□□ 1.98
KRT4-201ENST00000548097 RIMBP3BA6NNM3 1639 aa27.4■■□□□ 1.98
KRT4-201ENST00000548097 RIMBP3Q9UFD9 1639 aa27.4■■□□□ 1.98
KRT4-201ENST00000548097 DNAJC5Q9H3Z4 198 aa27.34■■□□□ 1.97
KRT4-201ENST00000548097 PTPRGP23470 1445 aa27.33■■□□□ 1.97
KRT4-201ENST00000548097 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
KRT4-201ENST00000548097 PLB1Q6P1J6 1458 aa27.25■■□□□ 1.95
KRT4-201ENST00000548097 ATP1B4Q9UN42 357 aaPredicted RBP27.23■■□□□ 1.95
KRT4-201ENST00000548097 FMN1Q68DA7 1419 aa27.22■■□□□ 1.95
KRT4-201ENST00000548097 ARID3CA6NKF2 412 aa27.2■■□□□ 1.94
KRT4-201ENST00000548097 VPS8Q8N3P4 1428 aa27.19■■□□□ 1.94
KRT4-201ENST00000548097 PCF11O94913 1555 aaKnown RBP27.18■■□□□ 1.94
KRT4-201ENST00000548097 ABCA8O94911 1581 aa27.15■■□□□ 1.94
KRT4-201ENST00000548097 RAPGEF6Q8TEU7 1601 aa27.15■■□□□ 1.94
KRT4-201ENST00000548097 UACAQ9BZF9 1416 aa27.15■■□□□ 1.94
KRT4-201ENST00000548097 ADCY10Q96PN6 1610 aa27.1■■□□□ 1.93
KRT4-201ENST00000548097 CASKIN1Q8WXD9 1431 aa27.1■■□□□ 1.93
KRT4-201ENST00000548097 NUP153P49790 1475 aaKnown RBP27.08■■□□□ 1.93
KRT4-201ENST00000548097 ABCC2Q92887 1545 aa27.08■■□□□ 1.93
KRT4-201ENST00000548097 LRRIQ1Q96JM4 1722 aa27.06■■□□□ 1.92
KRT4-201ENST00000548097 FYCO1Q9BQS8 1478 aa27.05■■□□□ 1.92
KRT4-201ENST00000548097 HECW1Q76N89 1606 aa27.04■■□□□ 1.92
KRT4-201ENST00000548097 CDK13Q14004 1512 aaKnown RBP27.02■■□□□ 1.92
KRT4-201ENST00000548097 UHRF1BP1LA0JNW5 1464 aa27.02■■□□□ 1.92
KRT4-201ENST00000548097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.01■■□□□ 1.91
KRT4-201ENST00000548097 HNRNPUL2Q1KMD3 747 aaKnown RBP27.01■■□□□ 1.91
KRT4-201ENST00000548097 EPRSP07814 1512 aaKnown RBP26.99■■□□□ 1.91
KRT4-201ENST00000548097 ATP10BO94823 1461 aa26.98■■□□□ 1.91
KRT4-201ENST00000548097 ZCCHC11Q5TAX3 1644 aaKnown RBP26.95■■□□□ 1.9
KRT4-201ENST00000548097 KDM5BQ9UGL1 1544 aa26.93■■□□□ 1.9
KRT4-201ENST00000548097 PPARGC1BQ86YN6 1023 aaKnown RBP26.93■■□□□ 1.9
KRT4-201ENST00000548097 NPM1P06748 294 aaKnown RBP eCLIP26.9■■□□□ 1.9
KRT4-201ENST00000548097 APLP2Q06481 763 aa26.89■■□□□ 1.9
KRT4-201ENST00000548097 CCDC18Q5T9S5 1454 aa26.89■■□□□ 1.89
KRT4-201ENST00000548097 TIAM1Q13009 1591 aa26.87■■□□□ 1.89
KRT4-201ENST00000548097 KANK4Q5T7N3 995 aaPredicted RBP26.86■■□□□ 1.89
KRT4-201ENST00000548097 CFAP43Q8NDM7 1665 aa26.85■■□□□ 1.89
KRT4-201ENST00000548097 MAGI3Q5TCQ9 1506 aa26.84■■□□□ 1.89
KRT4-201ENST00000548097 ASXL2Q76L83 1435 aa26.79■■□□□ 1.88
KRT4-201ENST00000548097 PLEKHD1A6NEE1 506 aa26.79■■□□□ 1.88
KRT4-201ENST00000548097 MAP3K1Q13233 1512 aa26.77■■□□□ 1.88
KRT4-201ENST00000548097 KCNH8Q96L42 1107 aa26.76■■□□□ 1.88
KRT4-201ENST00000548097 CDK11AQ9UQ88 783 aaPredicted RBP26.76■■□□□ 1.87
KRT4-201ENST00000548097 MTUS2Q5JR59 1369 aa26.76■■□□□ 1.87
KRT4-201ENST00000548097 LRRC9Q6ZRR7 1453 aa26.75■■□□□ 1.87
KRT4-201ENST00000548097 WDR7Q9Y4E6 1490 aa26.72■■□□□ 1.87
KRT4-201ENST00000548097 MAPKBP1O60336 1514 aa26.71■■□□□ 1.87
KRT4-201ENST00000548097 TROQ12816 1431 aaPredicted RBP26.7■■□□□ 1.87
KRT4-201ENST00000548097 KIF14Q15058 1648 aa26.68■■□□□ 1.86
KRT4-201ENST00000548097 EHBP1L1Q8N3D4 1523 aa26.68■■□□□ 1.86
KRT4-201ENST00000548097 NCOA2Q15596 1464 aa26.58■■□□□ 1.85
KRT4-201ENST00000548097 SUPT6HQ7KZ85 1726 aaKnown RBP26.58■■□□□ 1.85
KRT4-201ENST00000548097 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.57■■□□□ 1.84
KRT4-201ENST00000548097 TTC37Q6PGP7 1564 aa26.56■■□□□ 1.84
KRT4-201ENST00000548097 FAM69CQ0P6D2 419 aa26.55■■□□□ 1.84
KRT4-201ENST00000548097 ABCC10Q5T3U5 1492 aa26.55■■□□□ 1.84
KRT4-201ENST00000548097 DIP2BQ9P265 1576 aa26.55■■□□□ 1.84
KRT4-201ENST00000548097 PHLDB1Q86UU1 1377 aa26.52■■□□□ 1.84
KRT4-201ENST00000548097 TRHP20396 242 aaPredicted RBP26.5■■□□□ 1.83
KRT4-201ENST00000548097 KIF13AQ9H1H9 1805 aa26.5■■□□□ 1.83
KRT4-201ENST00000548097 ABCA9Q8IUA7 1624 aa26.49■■□□□ 1.83
KRT4-201ENST00000548097 CCNB3Q8WWL7 1395 aa26.48■■□□□ 1.83
KRT4-201ENST00000548097 GPATCH8Q9UKJ3 1502 aaKnown RBP26.45■■□□□ 1.82
KRT4-201ENST00000548097 CDC42BPAQ5VT25 1732 aa26.44■■□□□ 1.82
KRT4-201ENST00000548097 GLI2P10070 1586 aa26.44■■□□□ 1.82
KRT4-201ENST00000548097 CD109Q6YHK3 1445 aa26.43■■□□□ 1.82
KRT4-201ENST00000548097 TSPOAP1O95153 1857 aa26.41■■□□□ 1.82
KRT4-201ENST00000548097 MYO5CQ9NQX4 1742 aa26.41■■□□□ 1.82
KRT4-201ENST00000548097 MAP3K4Q9Y6R4 1608 aa26.41■■□□□ 1.82
KRT4-201ENST00000548097 MYOM3Q5VTT5 1437 aa26.4■■□□□ 1.82
KRT4-201ENST00000548097 CDC42BPBQ9Y5S2 1711 aa26.4■■□□□ 1.82
KRT4-201ENST00000548097 ZNF777Q9ULD5 760 aaPredicted RBP26.39■■□□□ 1.81
KRT4-201ENST00000548097 PLCH2O75038 1416 aa26.38■■□□□ 1.81
KRT4-201ENST00000548097 PREX2Q70Z35 1606 aa26.38■■□□□ 1.81
KRT4-201ENST00000548097 CFDP1Q9UEE9 299 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms