RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 CTTNBP2Q8WZ74 1663 aa17.76■□□□□ 0.43
SCN8A-205ENST00000548086 CEP170Q5SW79 1584 aa17.76■□□□□ 0.43
SCN8A-205ENST00000548086 CEP162Q5TB80 1403 aa17.73■□□□□ 0.43
SCN8A-205ENST00000548086 NUP160Q12769 1436 aa17.7■□□□□ 0.42
SCN8A-205ENST00000548086 IQGAP2Q13576 1575 aa17.67■□□□□ 0.42
SCN8A-205ENST00000548086 CLIP1P30622 1438 aa17.66■□□□□ 0.42
SCN8A-205ENST00000548086 KIAA0586Q9BVV6 1533 aa17.65■□□□□ 0.42
SCN8A-205ENST00000548086 ARHGAP35Q9NRY4 1499 aa17.61■□□□□ 0.41
SCN8A-205ENST00000548086 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
SCN8A-205ENST00000548086 CLASP1Q7Z460 1538 aa17.58■□□□□ 0.4
SCN8A-205ENST00000548086 ARAP1Q96P48 1450 aa17.57■□□□□ 0.4
SCN8A-205ENST00000548086 JPH4Q96JJ6 628 aa17.56■□□□□ 0.4
SCN8A-205ENST00000548086 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
SCN8A-205ENST00000548086 SAMD9Q5K651 1589 aa17.55■□□□□ 0.4
SCN8A-205ENST00000548086 FHOD3Q2V2M9 1422 aa17.55■□□□□ 0.4
SCN8A-205ENST00000548086 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
SCN8A-205ENST00000548086 EFCAB5A4FU69 1503 aa17.53■□□□□ 0.4
SCN8A-205ENST00000548086 DISP1Q96F81 1524 aa17.53■□□□□ 0.4
SCN8A-205ENST00000548086 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
SCN8A-205ENST00000548086 KIAA0556O60303 1618 aa17.51■□□□□ 0.39
SCN8A-205ENST00000548086 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
SCN8A-205ENST00000548086 ERCC6L2Q5T890 1561 aa17.5■□□□□ 0.39
SCN8A-205ENST00000548086 PRG4Q92954 1404 aaPredicted RBP17.5■□□□□ 0.39
SCN8A-205ENST00000548086 DNAJC5Q9H3Z4 198 aa17.47■□□□□ 0.39
SCN8A-205ENST00000548086 VPS8Q8N3P4 1428 aa17.44■□□□□ 0.38
SCN8A-205ENST00000548086 CARMIL2Q6F5E8 1435 aa17.44■□□□□ 0.38
SCN8A-205ENST00000548086 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.37
SCN8A-205ENST00000548086 FMN1Q68DA7 1419 aa17.37■□□□□ 0.37
SCN8A-205ENST00000548086 HRCP23327 699 aa17.36■□□□□ 0.37
SCN8A-205ENST00000548086 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
SCN8A-205ENST00000548086 PPARGC1BQ86YN6 1023 aaKnown RBP17.33■□□□□ 0.37
SCN8A-205ENST00000548086 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.37
SCN8A-205ENST00000548086 PTPRGP23470 1445 aa17.33■□□□□ 0.36
SCN8A-205ENST00000548086 ARID3CA6NKF2 412 aa17.31■□□□□ 0.36
SCN8A-205ENST00000548086 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
SCN8A-205ENST00000548086 LRRIQ1Q96JM4 1722 aa17.3■□□□□ 0.36
SCN8A-205ENST00000548086 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
SCN8A-205ENST00000548086 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
SCN8A-205ENST00000548086 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
SCN8A-205ENST00000548086 ABCA8O94911 1581 aa17.26■□□□□ 0.35
SCN8A-205ENST00000548086 RIMBP3CA6NJZ7 1639 aa17.26■□□□□ 0.35
SCN8A-205ENST00000548086 RIMBP3BA6NNM3 1639 aa17.26■□□□□ 0.35
SCN8A-205ENST00000548086 RIMBP3Q9UFD9 1639 aa17.26■□□□□ 0.35
SCN8A-205ENST00000548086 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
SCN8A-205ENST00000548086 HECW1Q76N89 1606 aa17.25■□□□□ 0.35
SCN8A-205ENST00000548086 CDK13Q14004 1512 aaKnown RBP17.23■□□□□ 0.35
SCN8A-205ENST00000548086 APLP2Q06481 763 aa17.23■□□□□ 0.35
SCN8A-205ENST00000548086 UACAQ9BZF9 1416 aa17.22■□□□□ 0.35
SCN8A-205ENST00000548086 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
SCN8A-205ENST00000548086 EPRSP07814 1512 aaKnown RBP17.21■□□□□ 0.35
SCN8A-205ENST00000548086 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.35
SCN8A-205ENST00000548086 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
SCN8A-205ENST00000548086 ABCC2Q92887 1545 aa17.19■□□□□ 0.34
SCN8A-205ENST00000548086 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
SCN8A-205ENST00000548086 ADCY10Q96PN6 1610 aa17.17■□□□□ 0.34
SCN8A-205ENST00000548086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
SCN8A-205ENST00000548086 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
SCN8A-205ENST00000548086 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
SCN8A-205ENST00000548086 CCDC18Q5T9S5 1454 aa17.15■□□□□ 0.34
SCN8A-205ENST00000548086 ATP10BO94823 1461 aa17.15■□□□□ 0.34
SCN8A-205ENST00000548086 MAGI3Q5TCQ9 1506 aa17.15■□□□□ 0.34
SCN8A-205ENST00000548086 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
SCN8A-205ENST00000548086 LRRC9Q6ZRR7 1453 aa17.13■□□□□ 0.33
SCN8A-205ENST00000548086 UHRF1BP1LA0JNW5 1464 aa17.13■□□□□ 0.33
SCN8A-205ENST00000548086 ZCCHC11Q5TAX3 1644 aaKnown RBP17.11■□□□□ 0.33
SCN8A-205ENST00000548086 MTUS2Q5JR59 1369 aa17.1■□□□□ 0.33
SCN8A-205ENST00000548086 KDM5BQ9UGL1 1544 aa17.08■□□□□ 0.33
SCN8A-205ENST00000548086 EHBP1L1Q8N3D4 1523 aa17.06■□□□□ 0.32
SCN8A-205ENST00000548086 CDK11AQ9UQ88 783 aaPredicted RBP17.02■□□□□ 0.32
SCN8A-205ENST00000548086 KIF14Q15058 1648 aa17.02■□□□□ 0.32
SCN8A-205ENST00000548086 PLEKHD1A6NEE1 506 aa17.02■□□□□ 0.31
SCN8A-205ENST00000548086 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.31
SCN8A-205ENST00000548086 TROQ12816 1431 aaPredicted RBP17.02■□□□□ 0.31
SCN8A-205ENST00000548086 SUPT6HQ7KZ85 1726 aaKnown RBP17■□□□□ 0.31
SCN8A-205ENST00000548086 NCOA2Q15596 1464 aa17■□□□□ 0.31
SCN8A-205ENST00000548086 PHLDB1Q86UU1 1377 aa16.99■□□□□ 0.31
SCN8A-205ENST00000548086 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCN8A-205ENST00000548086 KCNH8Q96L42 1107 aa16.97■□□□□ 0.31
SCN8A-205ENST00000548086 ASXL2Q76L83 1435 aa16.96■□□□□ 0.31
SCN8A-205ENST00000548086 WDR7Q9Y4E6 1490 aa16.94■□□□□ 0.3
SCN8A-205ENST00000548086 TTC37Q6PGP7 1564 aa16.91■□□□□ 0.3
SCN8A-205ENST00000548086 ABCC10Q5T3U5 1492 aa16.9■□□□□ 0.3
SCN8A-205ENST00000548086 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCN8A-205ENST00000548086 MYOM3Q5VTT5 1437 aa16.89■□□□□ 0.29
SCN8A-205ENST00000548086 MAPKBP1O60336 1514 aa16.88■□□□□ 0.29
SCN8A-205ENST00000548086 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
SCN8A-205ENST00000548086 CDC42BPAQ5VT25 1732 aa16.87■□□□□ 0.29
SCN8A-205ENST00000548086 GPATCH8Q9UKJ3 1502 aaKnown RBP16.86■□□□□ 0.29
SCN8A-205ENST00000548086 FGD6Q6ZV73 1430 aa16.86■□□□□ 0.29
SCN8A-205ENST00000548086 RRBP1Q9P2E9 1410 aaKnown RBP16.86■□□□□ 0.29
SCN8A-205ENST00000548086 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.28
SCN8A-205ENST00000548086 ITSN2Q9NZM3 1697 aa16.83■□□□□ 0.28
SCN8A-205ENST00000548086 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
SCN8A-205ENST00000548086 ABCA9Q8IUA7 1624 aa16.82■□□□□ 0.28
SCN8A-205ENST00000548086 PTPN23Q9H3S7 1636 aa16.82■□□□□ 0.28
SCN8A-205ENST00000548086 ZNF644Q9H582 1327 aaPredicted RBP16.82■□□□□ 0.28
SCN8A-205ENST00000548086 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
SCN8A-205ENST00000548086 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
SCN8A-205ENST00000548086 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
SCN8A-205ENST00000548086 ZNF777Q9ULD5 760 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms