RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
TMEM116-205ENST00000547878 FAM69CQ0P6D2 419 aa13.92□□□□□ -0.18
TMEM116-205ENST00000547878 ABCC10Q5T3U5 1492 aa13.91□□□□□ -0.18
TMEM116-205ENST00000547878 PRG4Q92954 1404 aaPredicted RBP13.9□□□□□ -0.18
TMEM116-205ENST00000547878 DIP2BQ9P265 1576 aa13.88□□□□□ -0.19
TMEM116-205ENST00000547878 FHAD1B1AJZ9 1412 aa13.88□□□□□ -0.19
TMEM116-205ENST00000547878 KDM6BO15054 1643 aa13.86□□□□□ -0.19
TMEM116-205ENST00000547878 JPH4Q96JJ6 628 aa13.84□□□□□ -0.19
TMEM116-205ENST00000547878 MAPKBP1O60336 1514 aa13.84□□□□□ -0.19
TMEM116-205ENST00000547878 WRNQ14191 1432 aaPredicted RBP eCLIP13.84□□□□□ -0.19
TMEM116-205ENST00000547878 ADCY10Q96PN6 1610 aa13.83□□□□□ -0.2
TMEM116-205ENST00000547878 PCGF6Q9BYE7 350 aa13.82□□□□□ -0.2
TMEM116-205ENST00000547878 TSPOAP1O95153 1857 aa13.81□□□□□ -0.2
TMEM116-205ENST00000547878 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
TMEM116-205ENST00000547878 RUSC2Q8N2Y8 1516 aa13.79□□□□□ -0.2
TMEM116-205ENST00000547878 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
TMEM116-205ENST00000547878 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.2
TMEM116-205ENST00000547878 TOP2BQ02880 1626 aa13.77□□□□□ -0.21
TMEM116-205ENST00000547878 LOC105371045A0A1W2PR82 267 aa13.76□□□□□ -0.21
TMEM116-205ENST00000547878 ADGRL1O94910 1474 aa13.72□□□□□ -0.21
TMEM116-205ENST00000547878 TRIM26Q12899 539 aaPredicted RBP13.71□□□□□ -0.21
TMEM116-205ENST00000547878 HECW2Q9P2P5 1572 aa13.69□□□□□ -0.22
TMEM116-205ENST00000547878 PPRC1Q5VV67 1664 aaKnown RBP13.69□□□□□ -0.22
TMEM116-205ENST00000547878 COL17A1Q9UMD9 1497 aaPredicted RBP13.65□□□□□ -0.22
TMEM116-205ENST00000547878 SENP3Q9H4L4 574 aaPredicted RBP13.64□□□□□ -0.23
TMEM116-205ENST00000547878 KIAA0586Q9BVV6 1533 aa13.64□□□□□ -0.23
TMEM116-205ENST00000547878 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
TMEM116-205ENST00000547878 ASXL2Q76L83 1435 aa13.61□□□□□ -0.23
TMEM116-205ENST00000547878 PTPRGP23470 1445 aa13.6□□□□□ -0.23
TMEM116-205ENST00000547878 GLI2P10070 1586 aa13.6□□□□□ -0.23
TMEM116-205ENST00000547878 ABCC2Q92887 1545 aa13.6□□□□□ -0.23
TMEM116-205ENST00000547878 CUL7Q14999 1698 aa13.56□□□□□ -0.24
TMEM116-205ENST00000547878 PLB1Q6P1J6 1458 aa13.56□□□□□ -0.24
TMEM116-205ENST00000547878 ERICH6Q7L0X2 663 aa13.56□□□□□ -0.24
TMEM116-205ENST00000547878 IGF1RP08069 1367 aa13.56□□□□□ -0.24
TMEM116-205ENST00000547878 MAP3K4Q9Y6R4 1608 aa13.54□□□□□ -0.24
TMEM116-205ENST00000547878 TNIKQ9UKE5 1360 aa13.53□□□□□ -0.24
TMEM116-205ENST00000547878 EPRSP07814 1512 aaKnown RBP13.53□□□□□ -0.24
TMEM116-205ENST00000547878 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
TMEM116-205ENST00000547878 UHRF1BP1LA0JNW5 1464 aa13.51□□□□□ -0.25
TMEM116-205ENST00000547878 PRKCSHP14314 528 aaPredicted RBP13.5□□□□□ -0.25
TMEM116-205ENST00000547878 PPARGC1BQ86YN6 1023 aaKnown RBP13.5□□□□□ -0.25
TMEM116-205ENST00000547878 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
TMEM116-205ENST00000547878 UACAQ9BZF9 1416 aa13.48□□□□□ -0.25
TMEM116-205ENST00000547878 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
TMEM116-205ENST00000547878 KDM5BQ9UGL1 1544 aa13.47□□□□□ -0.25
TMEM116-205ENST00000547878 TEX14Q8IWB6 1497 aa13.47□□□□□ -0.25
TMEM116-205ENST00000547878 APLP2Q06481 763 aa13.46□□□□□ -0.25
TMEM116-205ENST00000547878 DISP1Q96F81 1524 aa13.46□□□□□ -0.25
TMEM116-205ENST00000547878 KIF27Q86VH2 1401 aa13.46□□□□□ -0.26
TMEM116-205ENST00000547878 ZCCHC11Q5TAX3 1644 aaKnown RBP13.45□□□□□ -0.26
TMEM116-205ENST00000547878 IQGAP2Q13576 1575 aa13.44□□□□□ -0.26
TMEM116-205ENST00000547878 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
TMEM116-205ENST00000547878 KIF21BO75037 1637 aa13.41□□□□□ -0.26
TMEM116-205ENST00000547878 FAM9AQ8IZU1 332 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-205ENST00000547878 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
TMEM116-205ENST00000547878 EEA1Q15075 1411 aa13.39□□□□□ -0.27
TMEM116-205ENST00000547878 WDR7Q9Y4E6 1490 aa13.39□□□□□ -0.27
TMEM116-205ENST00000547878 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
TMEM116-205ENST00000547878 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
TMEM116-205ENST00000547878 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
TMEM116-205ENST00000547878 UGGT2Q9NYU1 1516 aa13.35□□□□□ -0.27
TMEM116-205ENST00000547878 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
TMEM116-205ENST00000547878 PTPRMP28827 1452 aa13.33□□□□□ -0.28
TMEM116-205ENST00000547878 KCNH8Q96L42 1107 aa13.32□□□□□ -0.28
TMEM116-205ENST00000547878 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
TMEM116-205ENST00000547878 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
TMEM116-205ENST00000547878 ARAP3Q8WWN8 1544 aa13.27□□□□□ -0.29
TMEM116-205ENST00000547878 PCF11O94913 1555 aaKnown RBP13.27□□□□□ -0.29
TMEM116-205ENST00000547878 BCL11AQ9H165 835 aa13.26□□□□□ -0.29
TMEM116-205ENST00000547878 ABCA8O94911 1581 aa13.26□□□□□ -0.29
TMEM116-205ENST00000547878 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
TMEM116-205ENST00000547878 RAPGEF2Q9Y4G8 1499 aa13.25□□□□□ -0.29
TMEM116-205ENST00000547878 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
TMEM116-205ENST00000547878 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
TMEM116-205ENST00000547878 RAPGEF3O95398 923 aa13.22□□□□□ -0.29
TMEM116-205ENST00000547878 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
TMEM116-205ENST00000547878 HSPA2P54652 639 aa13.21□□□□□ -0.3
TMEM116-205ENST00000547878 GOLGA3Q08378 1498 aa13.21□□□□□ -0.3
TMEM116-205ENST00000547878 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
TMEM116-205ENST00000547878 FRMPD1Q5SYB0 1578 aa13.19□□□□□ -0.3
TMEM116-205ENST00000547878 RIMS1Q86UR5 1692 aaKnown RBP13.17□□□□□ -0.3
TMEM116-205ENST00000547878 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
TMEM116-205ENST00000547878 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-205ENST00000547878 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
TMEM116-205ENST00000547878 CERKQ8TCT0 537 aa13.16□□□□□ -0.3
TMEM116-205ENST00000547878 ATP10BO94823 1461 aa13.16□□□□□ -0.3
TMEM116-205ENST00000547878 SOCS7O14512 581 aa13.14□□□□□ -0.31
TMEM116-205ENST00000547878 DISP3Q9P2K9 1392 aa13.14□□□□□ -0.31
TMEM116-205ENST00000547878 PLPPR3Q6T4P5 718 aa13.13□□□□□ -0.31
TMEM116-205ENST00000547878 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
TMEM116-205ENST00000547878 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
TMEM116-205ENST00000547878 PHLDB1Q86UU1 1377 aa13.12□□□□□ -0.31
TMEM116-205ENST00000547878 NEO1Q92859 1461 aa13.12□□□□□ -0.31
TMEM116-205ENST00000547878 SIGLEC1Q9BZZ2 1709 aa13.11□□□□□ -0.31
TMEM116-205ENST00000547878 ARHGEF40Q8TER5 1519 aa13.11□□□□□ -0.31
TMEM116-205ENST00000547878 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
TMEM116-205ENST00000547878 P3H3Q8IVL6 736 aa13.09□□□□□ -0.31
TMEM116-205ENST00000547878 RICTORQ6R327 1708 aa13.07□□□□□ -0.32
TMEM116-205ENST00000547878 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms