RNA–Protein interactions for RNA: ENST00000547581.5

PFKM-209, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 3,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-209ENST00000547581 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
PFKM-209ENST00000547581 VPS8Q8N3P4 1428 aa12.8□□□□□ -0.36
PFKM-209ENST00000547581 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
PFKM-209ENST00000547581 SHROOM2Q13796 1616 aa12.78□□□□□ -0.36
PFKM-209ENST00000547581 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
PFKM-209ENST00000547581 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
PFKM-209ENST00000547581 GAPVD1Q14C86 1478 aa12.75□□□□□ -0.37
PFKM-209ENST00000547581 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
PFKM-209ENST00000547581 SYNJ2O15056 1496 aa12.71□□□□□ -0.37
PFKM-209ENST00000547581 NUP160Q12769 1436 aa12.69□□□□□ -0.38
PFKM-209ENST00000547581 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.381e-6■■■■■ 33.8
PFKM-209ENST00000547581 PRXQ9BXM0 1461 aa12.69□□□□□ -0.38
PFKM-209ENST00000547581 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
PFKM-209ENST00000547581 TTBK1Q5TCY1 1321 aaPredicted RBP12.68□□□□□ -0.38
PFKM-209ENST00000547581 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
PFKM-209ENST00000547581 MYT1Q01538 1121 aa12.68□□□□□ -0.38
PFKM-209ENST00000547581 CEP170Q5SW79 1584 aa12.67□□□□□ -0.38
PFKM-209ENST00000547581 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
PFKM-209ENST00000547581 FHAD1B1AJZ9 1412 aa12.67□□□□□ -0.38
PFKM-209ENST00000547581 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
PFKM-209ENST00000547581 IGF1RP08069 1367 aa12.66□□□□□ -0.38
PFKM-209ENST00000547581 GRIN2AQ12879 1464 aa12.65□□□□□ -0.39
PFKM-209ENST00000547581 HNRNPUL2Q1KMD3 747 aaKnown RBP12.61□□□□□ -0.39
PFKM-209ENST00000547581 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
PFKM-209ENST00000547581 TDRD9Q8NDG6 1382 aaKnown RBP12.59□□□□□ -0.39
PFKM-209ENST00000547581 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
PFKM-209ENST00000547581 UGGT2Q9NYU1 1516 aa12.55□□□□□ -0.4
PFKM-209ENST00000547581 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
PFKM-209ENST00000547581 RRBP1Q9P2E9 1410 aaKnown RBP12.53□□□□□ -0.4
PFKM-209ENST00000547581 KIAA0586Q9BVV6 1533 aa12.51□□□□□ -0.41
PFKM-209ENST00000547581 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
PFKM-209ENST00000547581 IQGAP2Q13576 1575 aa12.49□□□□□ -0.41
PFKM-209ENST00000547581 RIMBP3CA6NJZ7 1639 aa12.49□□□□□ -0.41
PFKM-209ENST00000547581 RIMBP3BA6NNM3 1639 aa12.49□□□□□ -0.41
PFKM-209ENST00000547581 RIMBP3Q9UFD9 1639 aa12.49□□□□□ -0.41
PFKM-209ENST00000547581 DHX57Q6P158 1386 aaKnown RBP12.47□□□□□ -0.41
PFKM-209ENST00000547581 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
PFKM-209ENST00000547581 CCNB3Q8WWL7 1395 aa12.45□□□□□ -0.42
PFKM-209ENST00000547581 RANGAP1P46060 587 aaPredicted RBP12.44□□□□□ -0.42
PFKM-209ENST00000547581 KIAA0556O60303 1618 aa12.44□□□□□ -0.42
PFKM-209ENST00000547581 ARHGAP35Q9NRY4 1499 aa12.44□□□□□ -0.42
PFKM-209ENST00000547581 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
PFKM-209ENST00000547581 MIER1Q8N108 512 aa12.44□□□□□ -0.42
PFKM-209ENST00000547581 DISP1Q96F81 1524 aa12.43□□□□□ -0.42
PFKM-209ENST00000547581 EFCAB5A4FU69 1503 aa12.41□□□□□ -0.42
PFKM-209ENST00000547581 ARHGEF11O15085 1522 aa12.41□□□□□ -0.42
PFKM-209ENST00000547581 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
PFKM-209ENST00000547581 CFAP43Q8NDM7 1665 aa12.4□□□□□ -0.42
PFKM-209ENST00000547581 ERCC6L2Q5T890 1561 aa12.4□□□□□ -0.42
PFKM-209ENST00000547581 MAPKBP1O60336 1514 aa12.38□□□□□ -0.43
PFKM-209ENST00000547581 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
PFKM-209ENST00000547581 UHRF1BP1LA0JNW5 1464 aa12.36□□□□□ -0.43
PFKM-209ENST00000547581 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
PFKM-209ENST00000547581 YTHDC1Q96MU7 727 aaKnown RBP12.35□□□□□ -0.43
PFKM-209ENST00000547581 ABCA8O94911 1581 aa12.35□□□□□ -0.43
PFKM-209ENST00000547581 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
PFKM-209ENST00000547581 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
PFKM-209ENST00000547581 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.32□□□□□ -0.44
PFKM-209ENST00000547581 SETD5Q9C0A6 1442 aa12.32□□□□□ -0.44
PFKM-209ENST00000547581 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
PFKM-209ENST00000547581 LRRIQ1Q96JM4 1722 aa12.32□□□□□ -0.44
PFKM-209ENST00000547581 ADCY10Q96PN6 1610 aa12.31□□□□□ -0.44
PFKM-209ENST00000547581 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
PFKM-209ENST00000547581 FYCO1Q9BQS8 1478 aa12.27□□□□□ -0.45
PFKM-209ENST00000547581 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.45
PFKM-209ENST00000547581 CHMP7Q8WUX9 453 aaPredicted RBP12.25□□□□□ -0.45
PFKM-209ENST00000547581 CASKIN1Q8WXD9 1431 aa12.25□□□□□ -0.45
PFKM-209ENST00000547581 ABCC2Q92887 1545 aa12.24□□□□□ -0.45
PFKM-209ENST00000547581 PRG4Q92954 1404 aaPredicted RBP12.24□□□□□ -0.45
PFKM-209ENST00000547581 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
PFKM-209ENST00000547581 RAPGEF6Q8TEU7 1601 aa12.23□□□□□ -0.45
PFKM-209ENST00000547581 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
PFKM-209ENST00000547581 ITGAEP38570 1179 aa12.21□□□□□ -0.46
PFKM-209ENST00000547581 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
PFKM-209ENST00000547581 GLI2P10070 1586 aa12.2□□□□□ -0.46
PFKM-209ENST00000547581 PHLDB1Q86UU1 1377 aa12.2□□□□□ -0.46
PFKM-209ENST00000547581 KIF13AQ9H1H9 1805 aa12.2□□□□□ -0.46
PFKM-209ENST00000547581 PCF11O94913 1555 aaKnown RBP12.2□□□□□ -0.46
PFKM-209ENST00000547581 FAM50AQ14320 339 aaKnown RBP12.19□□□□□ -0.46
PFKM-209ENST00000547581 JPH4Q96JJ6 628 aa12.18□□□□□ -0.46
PFKM-209ENST00000547581 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
PFKM-209ENST00000547581 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
PFKM-209ENST00000547581 PPRC1Q5VV67 1664 aaKnown RBP12.15□□□□□ -0.47
PFKM-209ENST00000547581 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
PFKM-209ENST00000547581 MAP3K4Q9Y6R4 1608 aa12.14□□□□□ -0.47
PFKM-209ENST00000547581 FHOD3Q2V2M9 1422 aa12.13□□□□□ -0.47
PFKM-209ENST00000547581 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
PFKM-209ENST00000547581 NUP153P49790 1475 aaKnown RBP12.12□□□□□ -0.47
PFKM-209ENST00000547581 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
PFKM-209ENST00000547581 UACAQ9BZF9 1416 aa12.12□□□□□ -0.47
PFKM-209ENST00000547581 CCER2I3L3R5 266 aa12.12□□□□□ -0.47
PFKM-209ENST00000547581 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
PFKM-209ENST00000547581 DIP2BQ9P265 1576 aa12.11□□□□□ -0.47
PFKM-209ENST00000547581 MTUS2Q5JR59 1369 aa12.11□□□□□ -0.47
PFKM-209ENST00000547581 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
PFKM-209ENST00000547581 ABCA9Q8IUA7 1624 aa12.09□□□□□ -0.47
PFKM-209ENST00000547581 POLR1AO95602 1720 aaPredicted RBP12.09□□□□□ -0.47
PFKM-209ENST00000547581 HFM1A2PYH4 1435 aa12.09□□□□□ -0.47
PFKM-209ENST00000547581 P3H3Q8IVL6 736 aa12.09□□□□□ -0.47
PFKM-209ENST00000547581 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms