RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ABCA5Q8WWZ7 1642 aa23.07■■□□□ 1.28
BRF1-212ENST00000547562 CFAP43Q8NDM7 1665 aa23.07■■□□□ 1.28
BRF1-212ENST00000547562 CLSPNQ9HAW4 1339 aa23.07■■□□□ 1.28
BRF1-212ENST00000547562 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
BRF1-212ENST00000547562 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
BRF1-212ENST00000547562 LRRC9Q6ZRR7 1453 aa23.06■■□□□ 1.28
BRF1-212ENST00000547562 DHX57Q6P158 1386 aaKnown RBP23.05■■□□□ 1.28
BRF1-212ENST00000547562 DNAJC5BQ9UF47 199 aa23.04■■□□□ 1.28
BRF1-212ENST00000547562 FHOD3Q2V2M9 1422 aa23■■□□□ 1.27
BRF1-212ENST00000547562 P3H3Q8IVL6 736 aa23■■□□□ 1.27
BRF1-212ENST00000547562 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
BRF1-212ENST00000547562 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
BRF1-212ENST00000547562 TDRD9Q8NDG6 1382 aaKnown RBP22.98■■□□□ 1.27
BRF1-212ENST00000547562 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.276e-8■■■■■ 31
BRF1-212ENST00000547562 CASKIN1Q8WXD9 1431 aa22.94■■□□□ 1.26
BRF1-212ENST00000547562 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
BRF1-212ENST00000547562 PHLDB1Q86UU1 1377 aa22.92■■□□□ 1.26
BRF1-212ENST00000547562 ITGAEP38570 1179 aa22.89■■□□□ 1.26
BRF1-212ENST00000547562 FMN1Q68DA7 1419 aa22.89■■□□□ 1.26
BRF1-212ENST00000547562 SAMD9Q5K651 1589 aa22.89■■□□□ 1.25
BRF1-212ENST00000547562 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
BRF1-212ENST00000547562 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
BRF1-212ENST00000547562 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.25
BRF1-212ENST00000547562 RAB3GAP2Q9H2M9 1393 aa22.83■■□□□ 1.24
BRF1-212ENST00000547562 PBRM1Q86U86 1689 aa22.82■■□□□ 1.24
BRF1-212ENST00000547562 SETD5Q9C0A6 1442 aa22.78■■□□□ 1.24
BRF1-212ENST00000547562 MRC2Q9UBG0 1479 aa22.78■■□□□ 1.24
BRF1-212ENST00000547562 ACIN1Q9UKV3 1341 aaKnown RBP22.78■■□□□ 1.24
BRF1-212ENST00000547562 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.24
BRF1-212ENST00000547562 LRRIQ1Q96JM4 1722 aa22.77■■□□□ 1.24
BRF1-212ENST00000547562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.75■■□□□ 1.23
BRF1-212ENST00000547562 THOC2Q8NI27 1593 aaKnown RBP22.73■■□□□ 1.23
BRF1-212ENST00000547562 CENPBP07199 599 aaPredicted RBP22.73■■□□□ 1.23
BRF1-212ENST00000547562 NEUROD1Q13562 356 aa22.73■■□□□ 1.23
BRF1-212ENST00000547562 MAPKBP1O60336 1514 aa22.73■■□□□ 1.23
BRF1-212ENST00000547562 GRIN2BQ13224 1484 aa22.72■■□□□ 1.23
BRF1-212ENST00000547562 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
BRF1-212ENST00000547562 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
BRF1-212ENST00000547562 FGD6Q6ZV73 1430 aa22.67■■□□□ 1.22
BRF1-212ENST00000547562 MIER1Q8N108 512 aa22.67■■□□□ 1.22
BRF1-212ENST00000547562 IQGAP2Q13576 1575 aa22.66■■□□□ 1.22
BRF1-212ENST00000547562 WDR62O43379 1518 aa22.63■■□□□ 1.21
BRF1-212ENST00000547562 SUPT6HQ7KZ85 1726 aaKnown RBP22.63■■□□□ 1.21
BRF1-212ENST00000547562 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
BRF1-212ENST00000547562 EHBP1L1Q8N3D4 1523 aa22.62■■□□□ 1.21
BRF1-212ENST00000547562 NCOA2Q15596 1464 aa22.6■■□□□ 1.21
BRF1-212ENST00000547562 CCDC18Q5T9S5 1454 aa22.59■■□□□ 1.21
BRF1-212ENST00000547562 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
BRF1-212ENST00000547562 HECW1Q76N89 1606 aa22.57■■□□□ 1.2
BRF1-212ENST00000547562 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
BRF1-212ENST00000547562 MAGI3Q5TCQ9 1506 aa22.54■■□□□ 1.2
BRF1-212ENST00000547562 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
BRF1-212ENST00000547562 UGGT2Q9NYU1 1516 aa22.53■■□□□ 1.2
BRF1-212ENST00000547562 PTPRKQ15262 1439 aa22.5■■□□□ 1.19
BRF1-212ENST00000547562 HFM1A2PYH4 1435 aa22.49■■□□□ 1.19
BRF1-212ENST00000547562 PTPN23Q9H3S7 1636 aa22.49■■□□□ 1.19
BRF1-212ENST00000547562 YTHDC1Q96MU7 727 aaKnown RBP22.49■■□□□ 1.19
BRF1-212ENST00000547562 EPRSP07814 1512 aaKnown RBP22.48■■□□□ 1.19
BRF1-212ENST00000547562 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
BRF1-212ENST00000547562 SIN3AQ96ST3 1273 aa22.46■■□□□ 1.19
BRF1-212ENST00000547562 GTF3C3Q9Y5Q9 886 aa22.46■■□□□ 1.19
BRF1-212ENST00000547562 KIAA0586Q9BVV6 1533 aa22.45■■□□□ 1.18
BRF1-212ENST00000547562 TIMELESSQ9UNS1 1208 aa22.45■■□□□ 1.18
BRF1-212ENST00000547562 CDK13Q14004 1512 aaKnown RBP22.42■■□□□ 1.18
BRF1-212ENST00000547562 KIAA0556O60303 1618 aa22.42■■□□□ 1.18
BRF1-212ENST00000547562 ERCC6Q03468 1493 aa22.42■■□□□ 1.18
BRF1-212ENST00000547562 TCOF1Q13428 1488 aaKnown RBP22.42■■□□□ 1.18
BRF1-212ENST00000547562 NAIPQ13075 1403 aa22.41■■□□□ 1.18
BRF1-212ENST00000547562 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
BRF1-212ENST00000547562 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
BRF1-212ENST00000547562 DISP1Q96F81 1524 aa22.39■■□□□ 1.18
BRF1-212ENST00000547562 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
BRF1-212ENST00000547562 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
BRF1-212ENST00000547562 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.17
BRF1-212ENST00000547562 RAPGEF6Q8TEU7 1601 aa22.31■■□□□ 1.16
BRF1-212ENST00000547562 PPP1R15AO75807 674 aaPredicted RBP22.29■■□□□ 1.16
BRF1-212ENST00000547562 AKNAQ7Z591 1439 aa22.29■■□□□ 1.16
BRF1-212ENST00000547562 NUP153P49790 1475 aaKnown RBP22.29■■□□□ 1.16
BRF1-212ENST00000547562 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
BRF1-212ENST00000547562 ARID3CA6NKF2 412 aa22.28■■□□□ 1.16
BRF1-212ENST00000547562 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
BRF1-212ENST00000547562 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
BRF1-212ENST00000547562 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
BRF1-212ENST00000547562 RRP7BPQ9NSQ0 103 aa22.23■■□□□ 1.15
BRF1-212ENST00000547562 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
BRF1-212ENST00000547562 CHIC2Q9UKJ5 165 aa22.22■■□□□ 1.15
BRF1-212ENST00000547562 KDM6BO15054 1643 aa22.19■■□□□ 1.14
BRF1-212ENST00000547562 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
BRF1-212ENST00000547562 NUP160Q12769 1436 aa22.18■■□□□ 1.14
BRF1-212ENST00000547562 DNMT1P26358 1616 aaKnown RBP22.17■■□□□ 1.14
BRF1-212ENST00000547562 DAPK1P53355 1430 aa22.15■■□□□ 1.14
BRF1-212ENST00000547562 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
BRF1-212ENST00000547562 FBLN2P98095 1184 aa22.14■■□□□ 1.13
BRF1-212ENST00000547562 ROCK1Q13464 1354 aa22.13■■□□□ 1.13
BRF1-212ENST00000547562 CARMIL2Q6F5E8 1435 aa22.13■■□□□ 1.13
BRF1-212ENST00000547562 PLB1Q6P1J6 1458 aa22.13■■□□□ 1.13
BRF1-212ENST00000547562 KDM5BQ9UGL1 1544 aa22.13■■□□□ 1.13
BRF1-212ENST00000547562 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
BRF1-212ENST00000547562 DDX10Q13206 875 aaKnown RBP22.11■■□□□ 1.13
BRF1-212ENST00000547562 ABCC5O15440 1437 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms