RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.37
LINC02409-201ENST00000547515 KIAA0586Q9BVV6 1533 aa17.32■□□□□ 0.36
LINC02409-201ENST00000547515 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
LINC02409-201ENST00000547515 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
LINC02409-201ENST00000547515 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
LINC02409-201ENST00000547515 PRXQ9BXM0 1461 aa17.27■□□□□ 0.36
LINC02409-201ENST00000547515 EEA1Q15075 1411 aa17.27■□□□□ 0.35
LINC02409-201ENST00000547515 PRG4Q92954 1404 aaPredicted RBP17.26■□□□□ 0.35
LINC02409-201ENST00000547515 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
LINC02409-201ENST00000547515 IQGAP2Q13576 1575 aa17.25■□□□□ 0.35
LINC02409-201ENST00000547515 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
LINC02409-201ENST00000547515 UGGT2Q9NYU1 1516 aa17.16■□□□□ 0.34
LINC02409-201ENST00000547515 KIF21BO75037 1637 aa17.14■□□□□ 0.33
LINC02409-201ENST00000547515 CARMIL2Q6F5E8 1435 aa17.12■□□□□ 0.33
LINC02409-201ENST00000547515 DISP1Q96F81 1524 aa17.11■□□□□ 0.33
LINC02409-201ENST00000547515 FAM9AQ8IZU1 332 aaPredicted RBP17.1■□□□□ 0.33
LINC02409-201ENST00000547515 KIAA0556O60303 1618 aa17.09■□□□□ 0.33
LINC02409-201ENST00000547515 TNIKQ9UKE5 1360 aa17.07■□□□□ 0.32
LINC02409-201ENST00000547515 ADCY10Q96PN6 1610 aa17.06■□□□□ 0.32
LINC02409-201ENST00000547515 PTPRGP23470 1445 aa17.04■□□□□ 0.32
LINC02409-201ENST00000547515 GOLGA3Q08378 1498 aa17.04■□□□□ 0.32
LINC02409-201ENST00000547515 SAMD9Q5K651 1589 aa16.99■□□□□ 0.31
LINC02409-201ENST00000547515 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
LINC02409-201ENST00000547515 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
LINC02409-201ENST00000547515 KIF13AQ9H1H9 1805 aa16.95■□□□□ 0.3
LINC02409-201ENST00000547515 MAPKBP1O60336 1514 aa16.95■□□□□ 0.3
LINC02409-201ENST00000547515 ABCC2Q92887 1545 aa16.95■□□□□ 0.3
LINC02409-201ENST00000547515 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
LINC02409-201ENST00000547515 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
LINC02409-201ENST00000547515 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
LINC02409-201ENST00000547515 NPM1P06748 294 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC02409-201ENST00000547515 ABCA8O94911 1581 aa16.91■□□□□ 0.3
LINC02409-201ENST00000547515 EFCAB5A4FU69 1503 aa16.9■□□□□ 0.3
LINC02409-201ENST00000547515 PLB1Q6P1J6 1458 aa16.88■□□□□ 0.29
LINC02409-201ENST00000547515 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
LINC02409-201ENST00000547515 UBTFP17480 764 aaKnown RBP16.88■□□□□ 0.29
LINC02409-201ENST00000547515 ZCCHC11Q5TAX3 1644 aaKnown RBP16.88■□□□□ 0.29
LINC02409-201ENST00000547515 DIP2BQ9P265 1576 aa16.85■□□□□ 0.29
LINC02409-201ENST00000547515 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
LINC02409-201ENST00000547515 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
LINC02409-201ENST00000547515 ABCC10Q5T3U5 1492 aa16.85■□□□□ 0.29
LINC02409-201ENST00000547515 RAPGEF6Q8TEU7 1601 aa16.82■□□□□ 0.28
LINC02409-201ENST00000547515 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
LINC02409-201ENST00000547515 RANGAP1P46060 587 aaPredicted RBP16.81■□□□□ 0.28
LINC02409-201ENST00000547515 ASXL2Q76L83 1435 aa16.8■□□□□ 0.28
LINC02409-201ENST00000547515 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
LINC02409-201ENST00000547515 GLI2P10070 1586 aa16.77■□□□□ 0.27
LINC02409-201ENST00000547515 TSPOAP1O95153 1857 aa16.76■□□□□ 0.27
LINC02409-201ENST00000547515 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
LINC02409-201ENST00000547515 ATP10BO94823 1461 aa16.73■□□□□ 0.27
LINC02409-201ENST00000547515 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
LINC02409-201ENST00000547515 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
LINC02409-201ENST00000547515 EPRSP07814 1512 aaKnown RBP16.72■□□□□ 0.27
LINC02409-201ENST00000547515 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
LINC02409-201ENST00000547515 FMN1Q68DA7 1419 aa16.7■□□□□ 0.26
LINC02409-201ENST00000547515 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
LINC02409-201ENST00000547515 PPRC1Q5VV67 1664 aaKnown RBP16.69■□□□□ 0.26
LINC02409-201ENST00000547515 HECW1Q76N89 1606 aa16.67■□□□□ 0.26
LINC02409-201ENST00000547515 CFAP43Q8NDM7 1665 aa16.66■□□□□ 0.26
LINC02409-201ENST00000547515 CLIP1P30622 1438 aa16.65■□□□□ 0.26
LINC02409-201ENST00000547515 ARID3CA6NKF2 412 aa16.65■□□□□ 0.26
LINC02409-201ENST00000547515 LRRIQ1Q96JM4 1722 aa16.65■□□□□ 0.26
LINC02409-201ENST00000547515 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
LINC02409-201ENST00000547515 PCF11O94913 1555 aaKnown RBP16.6■□□□□ 0.25
LINC02409-201ENST00000547515 ABCA9Q8IUA7 1624 aa16.6■□□□□ 0.25
LINC02409-201ENST00000547515 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
LINC02409-201ENST00000547515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
LINC02409-201ENST00000547515 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
LINC02409-201ENST00000547515 CEP162Q5TB80 1403 aa16.58■□□□□ 0.24
LINC02409-201ENST00000547515 CASKIN1Q8WXD9 1431 aa16.58■□□□□ 0.24
LINC02409-201ENST00000547515 KDM6BO15054 1643 aa16.58■□□□□ 0.24
LINC02409-201ENST00000547515 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
LINC02409-201ENST00000547515 TEX14Q8IWB6 1497 aa16.57■□□□□ 0.24
LINC02409-201ENST00000547515 LOC105371045A0A1W2PR82 267 aa16.56■□□□□ 0.24
LINC02409-201ENST00000547515 FYCO1Q9BQS8 1478 aa16.55■□□□□ 0.24
LINC02409-201ENST00000547515 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
LINC02409-201ENST00000547515 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
LINC02409-201ENST00000547515 ATP1B4Q9UN42 357 aaPredicted RBP16.53■□□□□ 0.24
LINC02409-201ENST00000547515 CCDC18Q5T9S5 1454 aa16.52■□□□□ 0.23
LINC02409-201ENST00000547515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC02409-201ENST00000547515 TTC37Q6PGP7 1564 aa16.49■□□□□ 0.23
LINC02409-201ENST00000547515 CDK11AQ9UQ88 783 aaPredicted RBP16.48■□□□□ 0.23
LINC02409-201ENST00000547515 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
LINC02409-201ENST00000547515 KIF14Q15058 1648 aa16.46■□□□□ 0.23
LINC02409-201ENST00000547515 MYO5CQ9NQX4 1742 aa16.46■□□□□ 0.23
LINC02409-201ENST00000547515 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.23
LINC02409-201ENST00000547515 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
LINC02409-201ENST00000547515 NEO1Q92859 1461 aa16.43■□□□□ 0.22
LINC02409-201ENST00000547515 PHLDB1Q86UU1 1377 aa16.42■□□□□ 0.22
LINC02409-201ENST00000547515 ARAP3Q8WWN8 1544 aa16.42■□□□□ 0.22
LINC02409-201ENST00000547515 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
LINC02409-201ENST00000547515 PLCH2O75038 1416 aa16.38■□□□□ 0.21
LINC02409-201ENST00000547515 FANCAO15360 1455 aa16.38■□□□□ 0.21
LINC02409-201ENST00000547515 CDC42BPBQ9Y5S2 1711 aa16.38■□□□□ 0.21
LINC02409-201ENST00000547515 CDC42BPAQ5VT25 1732 aa16.37■□□□□ 0.21
LINC02409-201ENST00000547515 PREX2Q70Z35 1606 aa16.36■□□□□ 0.21
LINC02409-201ENST00000547515 RICTORQ6R327 1708 aa16.36■□□□□ 0.21
LINC02409-201ENST00000547515 AKNAQ7Z591 1439 aa16.35■□□□□ 0.21
LINC02409-201ENST00000547515 FRMPD1Q5SYB0 1578 aa16.34■□□□□ 0.21
LINC02409-201ENST00000547515 EHBP1L1Q8N3D4 1523 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms