RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 ERCC6L2Q5T890 1561 aa40.47■■■■■ 4.07
RBFOX1-209ENST00000547427 KIAA0586Q9BVV6 1533 aa40.46■■■■■ 4.07
RBFOX1-209ENST00000547427 RAPGEF2Q9Y4G8 1499 aa40.45■■■■■ 4.07
RBFOX1-209ENST00000547427 PRG4Q92954 1404 aaPredicted RBP40.42■■■■■ 4.06
RBFOX1-209ENST00000547427 CHIC1Q5VXU3 224 aa40.38■■■■■ 4.05
RBFOX1-209ENST00000547427 IQGAP2Q13576 1575 aa40.26■■■■■ 4.04
RBFOX1-209ENST00000547427 EEA1Q15075 1411 aa40.25■■■■■ 4.03
RBFOX1-209ENST00000547427 CSRNP3Q8WYN3 585 aa40.24■■■■■ 4.03
RBFOX1-209ENST00000547427 PRXQ9BXM0 1461 aa40.23■■■■■ 4.03
RBFOX1-209ENST00000547427 FAM9AQ8IZU1 332 aaPredicted RBP40.17■■■■■ 4.02
RBFOX1-209ENST00000547427 CTTNBP2Q8WZ74 1663 aa40.14■■■■■ 4.02
RBFOX1-209ENST00000547427 CARMIL2Q6F5E8 1435 aa40.09■■■■■ 4.01
RBFOX1-209ENST00000547427 UGGT2Q9NYU1 1516 aa39.98■■■■□ 3.99
RBFOX1-209ENST00000547427 TRHP20396 242 aaPredicted RBP39.97■■■■□ 3.99
RBFOX1-209ENST00000547427 TTBK1Q5TCY1 1321 aaPredicted RBP39.96■■■■□ 3.99
RBFOX1-209ENST00000547427 PTPRGP23470 1445 aa39.93■■■■□ 3.98
RBFOX1-209ENST00000547427 TNIKQ9UKE5 1360 aa39.93■■■■□ 3.98
RBFOX1-209ENST00000547427 DISP1Q96F81 1524 aa39.92■■■■□ 3.98
RBFOX1-209ENST00000547427 KIAA0556O60303 1618 aa39.86■■■■□ 3.97
RBFOX1-209ENST00000547427 KIF21BO75037 1637 aa39.84■■■■□ 3.97
RBFOX1-209ENST00000547427 GOLGA3Q08378 1498 aa39.81■■■■□ 3.96
RBFOX1-209ENST00000547427 NPM1P06748 294 aaKnown RBP eCLIP39.81■■■■□ 3.96
RBFOX1-209ENST00000547427 ADCY10Q96PN6 1610 aa39.8■■■■□ 3.96
RBFOX1-209ENST00000547427 EHMT2Q96KQ7 1210 aa39.7■■■■□ 3.95
RBFOX1-209ENST00000547427 UACAQ9BZF9 1416 aa39.64■■■■□ 3.94
RBFOX1-209ENST00000547427 RANGAP1P46060 587 aaPredicted RBP39.61■■■■□ 3.93
RBFOX1-209ENST00000547427 UBTFP17480 764 aaKnown RBP39.6■■■■□ 3.93
RBFOX1-209ENST00000547427 P3H3Q8IVL6 736 aa39.59■■■■□ 3.93
RBFOX1-209ENST00000547427 UHRF1BP1LA0JNW5 1464 aa39.57■■■■□ 3.93
RBFOX1-209ENST00000547427 ABCC2Q92887 1545 aa39.56■■■■□ 3.92
RBFOX1-209ENST00000547427 MAPKBP1O60336 1514 aa39.55■■■■□ 3.92
RBFOX1-209ENST00000547427 SAMD9Q5K651 1589 aa39.53■■■■□ 3.92
RBFOX1-209ENST00000547427 PLB1Q6P1J6 1458 aa39.47■■■■□ 3.91
RBFOX1-209ENST00000547427 KIF13AQ9H1H9 1805 aa39.45■■■■□ 3.91
RBFOX1-209ENST00000547427 ABCA8O94911 1581 aa39.4■■■■□ 3.9
RBFOX1-209ENST00000547427 ABCC10Q5T3U5 1492 aa39.39■■■■□ 3.9
RBFOX1-209ENST00000547427 KDM5BQ9UGL1 1544 aa39.39■■■■□ 3.9
RBFOX1-209ENST00000547427 ZCCHC11Q5TAX3 1644 aaKnown RBP39.37■■■■□ 3.89
RBFOX1-209ENST00000547427 FAM69CQ0P6D2 419 aa39.37■■■■□ 3.89
RBFOX1-209ENST00000547427 EFCAB5A4FU69 1503 aa39.36■■■■□ 3.89
RBFOX1-209ENST00000547427 DIP2BQ9P265 1576 aa39.33■■■■□ 3.89
RBFOX1-209ENST00000547427 ASXL2Q76L83 1435 aa39.33■■■■□ 3.89
RBFOX1-209ENST00000547427 FHOD3Q2V2M9 1422 aa39.32■■■■□ 3.89
RBFOX1-209ENST00000547427 RAPGEF6Q8TEU7 1601 aa39.23■■■■□ 3.87
RBFOX1-209ENST00000547427 ARID3CA6NKF2 412 aa39.18■■■■□ 3.86
RBFOX1-209ENST00000547427 TSPOAP1O95153 1857 aa39.13■■■■□ 3.86
RBFOX1-209ENST00000547427 ARHGAP35Q9NRY4 1499 aa39.12■■■■□ 3.85
RBFOX1-209ENST00000547427 WDR7Q9Y4E6 1490 aa39.11■■■■□ 3.85
RBFOX1-209ENST00000547427 EPRSP07814 1512 aaKnown RBP39.09■■■■□ 3.85
RBFOX1-209ENST00000547427 GLI2P10070 1586 aa39.08■■■■□ 3.85
RBFOX1-209ENST00000547427 ATP10BO94823 1461 aa39.08■■■■□ 3.85
RBFOX1-209ENST00000547427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.07■■■■□ 3.85
RBFOX1-209ENST00000547427 HNRNPUL2Q1KMD3 747 aaKnown RBP39.07■■■■□ 3.85
RBFOX1-209ENST00000547427 NUP153P49790 1475 aaKnown RBP39.03■■■■□ 3.84
RBFOX1-209ENST00000547427 FMN1Q68DA7 1419 aa39.02■■■■□ 3.84
RBFOX1-209ENST00000547427 KCNH8Q96L42 1107 aa39.01■■■■□ 3.84
RBFOX1-209ENST00000547427 ATP1B4Q9UN42 357 aaPredicted RBP38.94■■■■□ 3.82
RBFOX1-209ENST00000547427 MAP3K4Q9Y6R4 1608 aa38.92■■■■□ 3.82
RBFOX1-209ENST00000547427 CLIP1P30622 1438 aa38.91■■■■□ 3.82
RBFOX1-209ENST00000547427 HECW1Q76N89 1606 aa38.87■■■■□ 3.81
RBFOX1-209ENST00000547427 PPRC1Q5VV67 1664 aaKnown RBP38.86■■■■□ 3.81
RBFOX1-209ENST00000547427 CFAP43Q8NDM7 1665 aa38.84■■■■□ 3.81
RBFOX1-209ENST00000547427 PLEKHD1A6NEE1 506 aa38.82■■■■□ 3.8
RBFOX1-209ENST00000547427 CD109Q6YHK3 1445 aa38.79■■■■□ 3.8
RBFOX1-209ENST00000547427 TEX14Q8IWB6 1497 aa38.79■■■■□ 3.8
RBFOX1-209ENST00000547427 CDK13Q14004 1512 aaKnown RBP38.79■■■■□ 3.8
RBFOX1-209ENST00000547427 KDM6BO15054 1643 aa38.78■■■■□ 3.8
RBFOX1-209ENST00000547427 LOC105371045A0A1W2PR82 267 aa38.76■■■■□ 3.8
RBFOX1-209ENST00000547427 CEP162Q5TB80 1403 aa38.7■■■■□ 3.79
RBFOX1-209ENST00000547427 ABCA9Q8IUA7 1624 aa38.7■■■■□ 3.79
RBFOX1-209ENST00000547427 PCF11O94913 1555 aaKnown RBP38.7■■■■□ 3.79
RBFOX1-209ENST00000547427 CASKIN1Q8WXD9 1431 aa38.67■■■■□ 3.78
RBFOX1-209ENST00000547427 MAGI3Q5TCQ9 1506 aa38.67■■■■□ 3.78
RBFOX1-209ENST00000547427 CDK11AQ9UQ88 783 aaPredicted RBP38.65■■■■□ 3.78
RBFOX1-209ENST00000547427 LRRIQ1Q96JM4 1722 aa38.64■■■■□ 3.78
RBFOX1-209ENST00000547427 FYCO1Q9BQS8 1478 aa38.6■■■■□ 3.77
RBFOX1-209ENST00000547427 CCDC18Q5T9S5 1454 aa38.56■■■■□ 3.76
RBFOX1-209ENST00000547427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.51■■■■□ 3.76
RBFOX1-209ENST00000547427 COL17A1Q9UMD9 1497 aaPredicted RBP38.47■■■■□ 3.75
RBFOX1-209ENST00000547427 TTC37Q6PGP7 1564 aa38.47■■■■□ 3.75
RBFOX1-209ENST00000547427 TROQ12816 1431 aaPredicted RBP38.46■■■■□ 3.75
RBFOX1-209ENST00000547427 KIF14Q15058 1648 aa38.42■■■■□ 3.74
RBFOX1-209ENST00000547427 PHLDB1Q86UU1 1377 aa38.4■■■■□ 3.74
RBFOX1-209ENST00000547427 NEO1Q92859 1461 aa38.39■■■■□ 3.74
RBFOX1-209ENST00000547427 ARAP3Q8WWN8 1544 aa38.34■■■■□ 3.73
RBFOX1-209ENST00000547427 CFAP74Q9C0B2 1584 aa38.33■■■■□ 3.73
RBFOX1-209ENST00000547427 MYO5CQ9NQX4 1742 aa38.32■■■■□ 3.73
RBFOX1-209ENST00000547427 FANCAO15360 1455 aa38.32■■■■□ 3.72
RBFOX1-209ENST00000547427 PLCH2O75038 1416 aa38.28■■■■□ 3.72
RBFOX1-209ENST00000547427 AKNAQ7Z591 1439 aa38.24■■■■□ 3.71
RBFOX1-209ENST00000547427 VPS8Q8N3P4 1428 aa38.23■■■■□ 3.71
RBFOX1-209ENST00000547427 MTUS2Q5JR59 1369 aa38.19■■■■□ 3.7
RBFOX1-209ENST00000547427 RAPGEF3O95398 923 aa38.19■■■■□ 3.7
RBFOX1-209ENST00000547427 EFCAB2Q5VUJ9 269 aa38.18■■■■□ 3.7
RBFOX1-209ENST00000547427 ARHGAP5Q13017 1502 aa38.16■■■■□ 3.7
RBFOX1-209ENST00000547427 DENND4BO75064 1496 aaPredicted RBP38.15■■■■□ 3.7
RBFOX1-209ENST00000547427 ADGRL1O94910 1474 aa38.11■■■■□ 3.69
RBFOX1-209ENST00000547427 CDC42BPBQ9Y5S2 1711 aa38.11■■■■□ 3.69
RBFOX1-209ENST00000547427 PREX2Q70Z35 1606 aa38.09■■■■□ 3.69
RBFOX1-209ENST00000547427 FRMPD1Q5SYB0 1578 aa38.08■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms