RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 CSRNP3Q8WYN3 585 aa42.41■■■■■ 4.38
NKX2-1-205ENST00000546983 JPH4Q96JJ6 628 aa42.39■■■■■ 4.38
NKX2-1-205ENST00000546983 SHROOM2Q13796 1616 aa42.37■■■■■ 4.37
NKX2-1-205ENST00000546983 PRXQ9BXM0 1461 aa42.36■■■■■ 4.37
NKX2-1-205ENST00000546983 CYB5RLQ6IPT4 315 aa42.27■■■■■ 4.36
NKX2-1-205ENST00000546983 ARAP1Q96P48 1450 aa42.27■■■■■ 4.36
NKX2-1-205ENST00000546983 PRG4Q92954 1404 aaPredicted RBP42.24■■■■■ 4.35
NKX2-1-205ENST00000546983 IQGAP2Q13576 1575 aa42.16■■■■■ 4.34
NKX2-1-205ENST00000546983 CARMIL2Q6F5E8 1435 aa42.1■■■■■ 4.33
NKX2-1-205ENST00000546983 FAM9AQ8IZU1 332 aaPredicted RBP42.06■■■■■ 4.32
NKX2-1-205ENST00000546983 ERCC6L2Q5T890 1561 aa42.03■■■■■ 4.32
NKX2-1-205ENST00000546983 UGGT2Q9NYU1 1516 aa41.97■■■■■ 4.31
NKX2-1-205ENST00000546983 CTTNBP2Q8WZ74 1663 aa41.96■■■■■ 4.31
NKX2-1-205ENST00000546983 KIF21BO75037 1637 aa41.95■■■■■ 4.31
NKX2-1-205ENST00000546983 GOLGA3Q08378 1498 aa41.88■■■■■ 4.29
NKX2-1-205ENST00000546983 TNIKQ9UKE5 1360 aa41.88■■■■■ 4.29
NKX2-1-205ENST00000546983 PTPRGP23470 1445 aa41.82■■■■■ 4.29
NKX2-1-205ENST00000546983 DISP1Q96F81 1524 aa41.79■■■■■ 4.28
NKX2-1-205ENST00000546983 KIAA0556O60303 1618 aa41.71■■■■■ 4.27
NKX2-1-205ENST00000546983 NPM1P06748 294 aaKnown RBP eCLIP41.65■■■■■ 4.26
NKX2-1-205ENST00000546983 UBTFP17480 764 aaKnown RBP41.65■■■■■ 4.26
NKX2-1-205ENST00000546983 UACAQ9BZF9 1416 aa41.53■■■■■ 4.24
NKX2-1-205ENST00000546983 UHRF1BP1LA0JNW5 1464 aa41.52■■■■■ 4.24
NKX2-1-205ENST00000546983 TTBK1Q5TCY1 1321 aaPredicted RBP41.51■■■■■ 4.24
NKX2-1-205ENST00000546983 SAMD9Q5K651 1589 aa41.47■■■■■ 4.23
NKX2-1-205ENST00000546983 EFCAB5A4FU69 1503 aa41.46■■■■■ 4.23
NKX2-1-205ENST00000546983 ADCY10Q96PN6 1610 aa41.46■■■■■ 4.23
NKX2-1-205ENST00000546983 TRHP20396 242 aaPredicted RBP41.42■■■■■ 4.22
NKX2-1-205ENST00000546983 ABCC2Q92887 1545 aa41.42■■■■■ 4.22
NKX2-1-205ENST00000546983 EHMT2Q96KQ7 1210 aa41.37■■■■■ 4.21
NKX2-1-205ENST00000546983 MAPKBP1O60336 1514 aa41.35■■■■■ 4.21
NKX2-1-205ENST00000546983 P3H3Q8IVL6 736 aa41.33■■■■■ 4.21
NKX2-1-205ENST00000546983 RANGAP1P46060 587 aaPredicted RBP41.31■■■■■ 4.2
NKX2-1-205ENST00000546983 KDM5BQ9UGL1 1544 aa41.27■■■■■ 4.2
NKX2-1-205ENST00000546983 ABCA8O94911 1581 aa41.26■■■■■ 4.2
NKX2-1-205ENST00000546983 PLB1Q6P1J6 1458 aa41.26■■■■■ 4.2
NKX2-1-205ENST00000546983 FHOD3Q2V2M9 1422 aa41.19■■■■■ 4.18
NKX2-1-205ENST00000546983 FMN1Q68DA7 1419 aa41.13■■■■■ 4.17
NKX2-1-205ENST00000546983 ABCC10Q5T3U5 1492 aa41.13■■■■■ 4.17
NKX2-1-205ENST00000546983 ARHGAP35Q9NRY4 1499 aa41.11■■■■■ 4.17
NKX2-1-205ENST00000546983 ASXL2Q76L83 1435 aa41.09■■■■■ 4.17
NKX2-1-205ENST00000546983 RAPGEF6Q8TEU7 1601 aa41.07■■■■■ 4.16
NKX2-1-205ENST00000546983 ZCCHC11Q5TAX3 1644 aaKnown RBP41.05■■■■■ 4.16
NKX2-1-205ENST00000546983 FAM69CQ0P6D2 419 aa41.03■■■■■ 4.16
NKX2-1-205ENST00000546983 CLIP1P30622 1438 aa41■■■■■ 4.15
NKX2-1-205ENST00000546983 DIP2BQ9P265 1576 aa40.96■■■■■ 4.15
NKX2-1-205ENST00000546983 ATP10BO94823 1461 aa40.94■■■■■ 4.14
NKX2-1-205ENST00000546983 WDR7Q9Y4E6 1490 aa40.94■■■■■ 4.14
NKX2-1-205ENST00000546983 NUP153P49790 1475 aaKnown RBP40.9■■■■■ 4.14
NKX2-1-205ENST00000546983 GLI2P10070 1586 aa40.88■■■■■ 4.13
NKX2-1-205ENST00000546983 KIF13AQ9H1H9 1805 aa40.87■■■■■ 4.13
NKX2-1-205ENST00000546983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.86■■■■■ 4.13
NKX2-1-205ENST00000546983 HNRNPUL2Q1KMD3 747 aaKnown RBP40.86■■■■■ 4.13
NKX2-1-205ENST00000546983 EPRSP07814 1512 aaKnown RBP40.84■■■■■ 4.13
NKX2-1-205ENST00000546983 HECW1Q76N89 1606 aa40.8■■■■■ 4.12
NKX2-1-205ENST00000546983 CEP162Q5TB80 1403 aa40.79■■■■■ 4.12
NKX2-1-205ENST00000546983 PLEKHD1A6NEE1 506 aa40.77■■■■■ 4.12
NKX2-1-205ENST00000546983 LOC105371045A0A1W2PR82 267 aa40.76■■■■■ 4.12
NKX2-1-205ENST00000546983 ARID3CA6NKF2 412 aa40.76■■■■■ 4.12
NKX2-1-205ENST00000546983 CDK11AQ9UQ88 783 aaPredicted RBP40.75■■■■■ 4.11
NKX2-1-205ENST00000546983 ATP1B4Q9UN42 357 aaPredicted RBP40.73■■■■■ 4.11
NKX2-1-205ENST00000546983 CASKIN1Q8WXD9 1431 aa40.73■■■■■ 4.11
NKX2-1-205ENST00000546983 KCNH8Q96L42 1107 aa40.69■■■■■ 4.1
NKX2-1-205ENST00000546983 FYCO1Q9BQS8 1478 aa40.65■■■■■ 4.1
NKX2-1-205ENST00000546983 CCDC18Q5T9S5 1454 aa40.64■■■■■ 4.1
NKX2-1-205ENST00000546983 TEX14Q8IWB6 1497 aa40.62■■■■■ 4.09
NKX2-1-205ENST00000546983 MAP3K4Q9Y6R4 1608 aa40.59■■■■■ 4.09
NKX2-1-205ENST00000546983 CD109Q6YHK3 1445 aa40.57■■■■■ 4.08
NKX2-1-205ENST00000546983 CFAP43Q8NDM7 1665 aa40.56■■■■■ 4.08
NKX2-1-205ENST00000546983 PCF11O94913 1555 aaKnown RBP40.54■■■■■ 4.08
NKX2-1-205ENST00000546983 CDK13Q14004 1512 aaKnown RBP40.54■■■■■ 4.08
NKX2-1-205ENST00000546983 MAGI3Q5TCQ9 1506 aa40.51■■■■■ 4.08
NKX2-1-205ENST00000546983 ABCA9Q8IUA7 1624 aa40.47■■■■■ 4.07
NKX2-1-205ENST00000546983 TSPOAP1O95153 1857 aa40.44■■■■■ 4.06
NKX2-1-205ENST00000546983 PHLDB1Q86UU1 1377 aa40.42■■■■■ 4.06
NKX2-1-205ENST00000546983 TROQ12816 1431 aaPredicted RBP40.42■■■■■ 4.06
NKX2-1-205ENST00000546983 PPRC1Q5VV67 1664 aaKnown RBP40.37■■■■■ 4.05
NKX2-1-205ENST00000546983 VPS8Q8N3P4 1428 aa40.35■■■■■ 4.05
NKX2-1-205ENST00000546983 KDM6BO15054 1643 aa40.32■■■■■ 4.05
NKX2-1-205ENST00000546983 KIF14Q15058 1648 aa40.28■■■■■ 4.04
NKX2-1-205ENST00000546983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.28■■■■■ 4.04
NKX2-1-205ENST00000546983 LRRIQ1Q96JM4 1722 aa40.27■■■■■ 4.04
NKX2-1-205ENST00000546983 NEO1Q92859 1461 aa40.26■■■■■ 4.04
NKX2-1-205ENST00000546983 MTUS2Q5JR59 1369 aa40.19■■■■■ 4.02
NKX2-1-205ENST00000546983 PLCH2O75038 1416 aa40.17■■■■■ 4.02
NKX2-1-205ENST00000546983 ARAP3Q8WWN8 1544 aa40.17■■■■■ 4.02
NKX2-1-205ENST00000546983 CFAP74Q9C0B2 1584 aa40.16■■■■■ 4.02
NKX2-1-205ENST00000546983 TTC37Q6PGP7 1564 aa40.14■■■■■ 4.02
NKX2-1-205ENST00000546983 FANCAO15360 1455 aa40.12■■■■■ 4.01
NKX2-1-205ENST00000546983 EFCAB2Q5VUJ9 269 aa40.1■■■■■ 4.01
NKX2-1-205ENST00000546983 MAP3K1Q13233 1512 aa40.09■■■■■ 4.01
NKX2-1-205ENST00000546983 APLP2Q06481 763 aa40.08■■■■■ 4.01
NKX2-1-205ENST00000546983 EHBP1L1Q8N3D4 1523 aa40.06■■■■■ 4
NKX2-1-205ENST00000546983 MYO5CQ9NQX4 1742 aa40.04■■■■■ 4
NKX2-1-205ENST00000546983 COL17A1Q9UMD9 1497 aaPredicted RBP40.03■■■■■ 4
NKX2-1-205ENST00000546983 AKNAQ7Z591 1439 aa40.03■■■■■ 4
NKX2-1-205ENST00000546983 TIAM1Q13009 1591 aa40.01■■■■■ 4
NKX2-1-205ENST00000546983 ARHGAP5Q13017 1502 aa39.95■■■■□ 3.99
NKX2-1-205ENST00000546983 DENND4BO75064 1496 aaPredicted RBP39.94■■■■□ 3.98
NKX2-1-205ENST00000546983 CCNB3Q8WWL7 1395 aa39.93■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms