RNA–Protein interactions for RNA: ENST00000546843.2

R3HDM2-209, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 823 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-209ENST00000546843 JPH4Q96JJ6 628 aa28.26■■■□□ 2.11
R3HDM2-209ENST00000546843 KIAA0586Q9BVV6 1533 aa28.26■■■□□ 2.11
R3HDM2-209ENST00000546843 RAPGEF2Q9Y4G8 1499 aa28.26■■■□□ 2.11
R3HDM2-209ENST00000546843 PRG4Q92954 1404 aaPredicted RBP28.26■■■□□ 2.11
R3HDM2-209ENST00000546843 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
R3HDM2-209ENST00000546843 PRXQ9BXM0 1461 aa28.14■■■□□ 2.09
R3HDM2-209ENST00000546843 IQGAP2Q13576 1575 aa28.12■■■□□ 2.09
R3HDM2-209ENST00000546843 FAM9AQ8IZU1 332 aaPredicted RBP28.08■■■□□ 2.09
R3HDM2-209ENST00000546843 CSRNP3Q8WYN3 585 aa28.07■■■□□ 2.08
R3HDM2-209ENST00000546843 EEA1Q15075 1411 aa28.05■■■□□ 2.08
R3HDM2-209ENST00000546843 CTTNBP2Q8WZ74 1663 aa27.97■■■□□ 2.07
R3HDM2-209ENST00000546843 TTBK1Q5TCY1 1321 aaPredicted RBP27.96■■■□□ 2.07
R3HDM2-209ENST00000546843 CARMIL2Q6F5E8 1435 aa27.95■■■□□ 2.07
R3HDM2-209ENST00000546843 DISP1Q96F81 1524 aa27.94■■■□□ 2.06
R3HDM2-209ENST00000546843 UGGT2Q9NYU1 1516 aa27.94■■■□□ 2.06
R3HDM2-209ENST00000546843 TRHP20396 242 aaPredicted RBP27.92■■■□□ 2.06
R3HDM2-209ENST00000546843 TNIKQ9UKE5 1360 aa27.89■■■□□ 2.06
R3HDM2-209ENST00000546843 PTPRGP23470 1445 aa27.89■■■□□ 2.06
R3HDM2-209ENST00000546843 KIAA0556O60303 1618 aa27.87■■■□□ 2.05
R3HDM2-209ENST00000546843 ADCY10Q96PN6 1610 aa27.85■■■□□ 2.05
R3HDM2-209ENST00000546843 KIF21BO75037 1637 aa27.81■■■□□ 2.04
R3HDM2-209ENST00000546843 EHMT2Q96KQ7 1210 aa27.8■■■□□ 2.04
R3HDM2-209ENST00000546843 GOLGA3Q08378 1498 aa27.76■■■□□ 2.03
R3HDM2-209ENST00000546843 NPM1P06748 294 aaKnown RBP eCLIP27.71■■■□□ 2.03
R3HDM2-209ENST00000546843 UACAQ9BZF9 1416 aa27.7■■■□□ 2.03
R3HDM2-209ENST00000546843 RANGAP1P46060 587 aaPredicted RBP27.7■■■□□ 2.02
R3HDM2-209ENST00000546843 P3H3Q8IVL6 736 aa27.68■■■□□ 2.02
R3HDM2-209ENST00000546843 ABCC2Q92887 1545 aa27.67■■■□□ 2.02
R3HDM2-209ENST00000546843 UHRF1BP1LA0JNW5 1464 aa27.64■■■□□ 2.02
R3HDM2-209ENST00000546843 MAPKBP1O60336 1514 aa27.64■■■□□ 2.02
R3HDM2-209ENST00000546843 PLB1Q6P1J6 1458 aa27.64■■■□□ 2.01
R3HDM2-209ENST00000546843 SAMD9Q5K651 1589 aa27.63■■■□□ 2.01
R3HDM2-209ENST00000546843 UBTFP17480 764 aaKnown RBP27.61■■■□□ 2.01
R3HDM2-209ENST00000546843 ABCA8O94911 1581 aa27.56■■■□□ 2
R3HDM2-209ENST00000546843 FHOD3Q2V2M9 1422 aa27.54■■■□□ 2
R3HDM2-209ENST00000546843 ABCC10Q5T3U5 1492 aa27.54■■■□□ 2
R3HDM2-209ENST00000546843 KDM5BQ9UGL1 1544 aa27.53■■■□□ 2
R3HDM2-209ENST00000546843 KIF13AQ9H1H9 1805 aa27.53■■■□□ 2
R3HDM2-209ENST00000546843 DIP2BQ9P265 1576 aa27.52■■■□□ 2
R3HDM2-209ENST00000546843 ASXL2Q76L83 1435 aa27.51■■□□□ 1.99
R3HDM2-209ENST00000546843 FAM69CQ0P6D2 419 aa27.51■■□□□ 1.99
R3HDM2-209ENST00000546843 ZCCHC11Q5TAX3 1644 aaKnown RBP27.51■■□□□ 1.99
R3HDM2-209ENST00000546843 EFCAB5A4FU69 1503 aa27.47■■□□□ 1.99
R3HDM2-209ENST00000546843 ARID3CA6NKF2 412 aa27.45■■□□□ 1.98
R3HDM2-209ENST00000546843 RAPGEF6Q8TEU7 1601 aa27.39■■□□□ 1.98
R3HDM2-209ENST00000546843 ARHGAP35Q9NRY4 1499 aa27.38■■□□□ 1.97
R3HDM2-209ENST00000546843 WDR7Q9Y4E6 1490 aa27.35■■□□□ 1.97
R3HDM2-209ENST00000546843 EPRSP07814 1512 aaKnown RBP27.34■■□□□ 1.97
R3HDM2-209ENST00000546843 ATP10BO94823 1461 aa27.32■■□□□ 1.96
R3HDM2-209ENST00000546843 NUP153P49790 1475 aaKnown RBP27.32■■□□□ 1.96
R3HDM2-209ENST00000546843 GLI2P10070 1586 aa27.3■■□□□ 1.96
R3HDM2-209ENST00000546843 TSPOAP1O95153 1857 aa27.27■■□□□ 1.96
R3HDM2-209ENST00000546843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.24■■□□□ 1.95
R3HDM2-209ENST00000546843 HNRNPUL2Q1KMD3 747 aaKnown RBP27.24■■□□□ 1.95
R3HDM2-209ENST00000546843 KCNH8Q96L42 1107 aa27.24■■□□□ 1.95
R3HDM2-209ENST00000546843 FMN1Q68DA7 1419 aa27.21■■□□□ 1.95
R3HDM2-209ENST00000546843 MAP3K4Q9Y6R4 1608 aa27.19■■□□□ 1.94
R3HDM2-209ENST00000546843 PPRC1Q5VV67 1664 aaKnown RBP27.18■■□□□ 1.94
R3HDM2-209ENST00000546843 CLIP1P30622 1438 aa27.17■■□□□ 1.94
R3HDM2-209ENST00000546843 CDK13Q14004 1512 aaKnown RBP27.16■■□□□ 1.94
R3HDM2-209ENST00000546843 ATP1B4Q9UN42 357 aaPredicted RBP27.16■■□□□ 1.94
R3HDM2-209ENST00000546843 HECW1Q76N89 1606 aa27.12■■□□□ 1.93
R3HDM2-209ENST00000546843 KDM6BO15054 1643 aa27.1■■□□□ 1.93
R3HDM2-209ENST00000546843 CD109Q6YHK3 1445 aa27.09■■□□□ 1.93
R3HDM2-209ENST00000546843 LOC105371045A0A1W2PR82 267 aa27.09■■□□□ 1.93
R3HDM2-209ENST00000546843 PCF11O94913 1555 aaKnown RBP27.08■■□□□ 1.93
R3HDM2-209ENST00000546843 CFAP43Q8NDM7 1665 aa27.08■■□□□ 1.92
R3HDM2-209ENST00000546843 TEX14Q8IWB6 1497 aa27.06■■□□□ 1.92
R3HDM2-209ENST00000546843 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
R3HDM2-209ENST00000546843 PLEKHD1A6NEE1 506 aa27.04■■□□□ 1.92
R3HDM2-209ENST00000546843 ABCA9Q8IUA7 1624 aa27.02■■□□□ 1.92
R3HDM2-209ENST00000546843 MAGI3Q5TCQ9 1506 aa27.01■■□□□ 1.91
R3HDM2-209ENST00000546843 CASKIN1Q8WXD9 1431 aa27■■□□□ 1.91
R3HDM2-209ENST00000546843 LRRIQ1Q96JM4 1722 aa26.98■■□□□ 1.91
R3HDM2-209ENST00000546843 COL17A1Q9UMD9 1497 aaPredicted RBP26.98■■□□□ 1.91
R3HDM2-209ENST00000546843 FYCO1Q9BQS8 1478 aa26.95■■□□□ 1.91
R3HDM2-209ENST00000546843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.93■■□□□ 1.9
R3HDM2-209ENST00000546843 TTC37Q6PGP7 1564 aa26.92■■□□□ 1.9
R3HDM2-209ENST00000546843 CCDC18Q5T9S5 1454 aa26.9■■□□□ 1.9
R3HDM2-209ENST00000546843 CDK11AQ9UQ88 783 aaPredicted RBP26.88■■□□□ 1.89
R3HDM2-209ENST00000546843 TROQ12816 1431 aaPredicted RBP26.88■■□□□ 1.89
R3HDM2-209ENST00000546843 KIF14Q15058 1648 aa26.86■■□□□ 1.89
R3HDM2-209ENST00000546843 NEO1Q92859 1461 aa26.81■■□□□ 1.88
R3HDM2-209ENST00000546843 ARAP3Q8WWN8 1544 aa26.77■■□□□ 1.88
R3HDM2-209ENST00000546843 FANCAO15360 1455 aa26.77■■□□□ 1.88
R3HDM2-209ENST00000546843 PHLDB1Q86UU1 1377 aa26.74■■□□□ 1.87
R3HDM2-209ENST00000546843 PLCH2O75038 1416 aa26.73■■□□□ 1.87
R3HDM2-209ENST00000546843 AKNAQ7Z591 1439 aa26.72■■□□□ 1.87
R3HDM2-209ENST00000546843 RAPGEF3O95398 923 aa26.71■■□□□ 1.87
R3HDM2-209ENST00000546843 VPS8Q8N3P4 1428 aa26.71■■□□□ 1.87
R3HDM2-209ENST00000546843 CFAP74Q9C0B2 1584 aa26.71■■□□□ 1.87
R3HDM2-209ENST00000546843 MYO5CQ9NQX4 1742 aa26.7■■□□□ 1.86
R3HDM2-209ENST00000546843 FRMPD1Q5SYB0 1578 aa26.68■■□□□ 1.86
R3HDM2-209ENST00000546843 ARHGAP5Q13017 1502 aa26.66■■□□□ 1.86
R3HDM2-209ENST00000546843 MTUS2Q5JR59 1369 aa26.65■■□□□ 1.86
R3HDM2-209ENST00000546843 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.86
R3HDM2-209ENST00000546843 ADGRL1O94910 1474 aa26.63■■□□□ 1.85
R3HDM2-209ENST00000546843 EFCAB2Q5VUJ9 269 aa26.62■■□□□ 1.85
R3HDM2-209ENST00000546843 PREX2Q70Z35 1606 aa26.6■■□□□ 1.85
R3HDM2-209ENST00000546843 EHBP1L1Q8N3D4 1523 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms