RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
TROAP-204ENST00000546776 KIF21BO75037 1637 aa18.33■□□□□ 0.52
TROAP-204ENST00000546776 PRXQ9BXM0 1461 aa18.3■□□□□ 0.52
TROAP-204ENST00000546776 ARAP1Q96P48 1450 aa18.29■□□□□ 0.52
TROAP-204ENST00000546776 RAPGEF2Q9Y4G8 1499 aa18.28■□□□□ 0.52
TROAP-204ENST00000546776 JPH4Q96JJ6 628 aa18.27■□□□□ 0.52
TROAP-204ENST00000546776 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
TROAP-204ENST00000546776 KIAA0586Q9BVV6 1533 aa18.23■□□□□ 0.51
TROAP-204ENST00000546776 SHROOM2Q13796 1616 aa18.23■□□□□ 0.51
TROAP-204ENST00000546776 PRG4Q92954 1404 aaPredicted RBP18.21■□□□□ 0.51
TROAP-204ENST00000546776 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
TROAP-204ENST00000546776 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
TROAP-204ENST00000546776 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
TROAP-204ENST00000546776 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
TROAP-204ENST00000546776 CTTNBP2Q8WZ74 1663 aa18.12■□□□□ 0.49
TROAP-204ENST00000546776 CARMIL2Q6F5E8 1435 aa18.11■□□□□ 0.49
TROAP-204ENST00000546776 IQGAP2Q13576 1575 aa18.11■□□□□ 0.49
TROAP-204ENST00000546776 TNIKQ9UKE5 1360 aa18.09■□□□□ 0.49
TROAP-204ENST00000546776 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
TROAP-204ENST00000546776 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.48
TROAP-204ENST00000546776 PTPRGP23470 1445 aa18.01■□□□□ 0.47
TROAP-204ENST00000546776 UGGT2Q9NYU1 1516 aa18■□□□□ 0.47
TROAP-204ENST00000546776 TTBK1Q5TCY1 1321 aaPredicted RBP17.98■□□□□ 0.47
TROAP-204ENST00000546776 DISP1Q96F81 1524 aa17.95■□□□□ 0.46
TROAP-204ENST00000546776 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
TROAP-204ENST00000546776 EFCAB5A4FU69 1503 aa17.93■□□□□ 0.46
TROAP-204ENST00000546776 CLIP1P30622 1438 aa17.92■□□□□ 0.46
TROAP-204ENST00000546776 KIAA0556O60303 1618 aa17.91■□□□□ 0.46
TROAP-204ENST00000546776 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
TROAP-204ENST00000546776 ADCY10Q96PN6 1610 aa17.88■□□□□ 0.45
TROAP-204ENST00000546776 UACAQ9BZF9 1416 aa17.88■□□□□ 0.45
TROAP-204ENST00000546776 SAMD9Q5K651 1589 aa17.87■□□□□ 0.45
TROAP-204ENST00000546776 UHRF1BP1LA0JNW5 1464 aa17.85■□□□□ 0.45
TROAP-204ENST00000546776 ARHGAP35Q9NRY4 1499 aa17.83■□□□□ 0.45
TROAP-204ENST00000546776 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
TROAP-204ENST00000546776 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
TROAP-204ENST00000546776 P3H3Q8IVL6 736 aa17.81■□□□□ 0.44
TROAP-204ENST00000546776 FAM69CQ0P6D2 419 aa17.77■□□□□ 0.44
TROAP-204ENST00000546776 ABCC10Q5T3U5 1492 aa17.75■□□□□ 0.43
TROAP-204ENST00000546776 FHOD3Q2V2M9 1422 aa17.75■□□□□ 0.43
TROAP-204ENST00000546776 FMN1Q68DA7 1419 aa17.75■□□□□ 0.43
TROAP-204ENST00000546776 PLB1Q6P1J6 1458 aa17.75■□□□□ 0.43
TROAP-204ENST00000546776 KDM5BQ9UGL1 1544 aa17.74■□□□□ 0.43
TROAP-204ENST00000546776 VPS8Q8N3P4 1428 aa17.72■□□□□ 0.43
TROAP-204ENST00000546776 ASXL2Q76L83 1435 aa17.72■□□□□ 0.43
TROAP-204ENST00000546776 ABCA8O94911 1581 aa17.71■□□□□ 0.43
TROAP-204ENST00000546776 DIP2BQ9P265 1576 aa17.69■□□□□ 0.42
TROAP-204ENST00000546776 ZCCHC11Q5TAX3 1644 aaKnown RBP17.69■□□□□ 0.42
TROAP-204ENST00000546776 KIF13AQ9H1H9 1805 aa17.68■□□□□ 0.42
TROAP-204ENST00000546776 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
TROAP-204ENST00000546776 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
TROAP-204ENST00000546776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
TROAP-204ENST00000546776 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
TROAP-204ENST00000546776 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
TROAP-204ENST00000546776 PCF11O94913 1555 aaKnown RBP17.62■□□□□ 0.41
TROAP-204ENST00000546776 CASKIN1Q8WXD9 1431 aa17.62■□□□□ 0.41
TROAP-204ENST00000546776 GLI2P10070 1586 aa17.62■□□□□ 0.41
TROAP-204ENST00000546776 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
TROAP-204ENST00000546776 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
TROAP-204ENST00000546776 APLP2Q06481 763 aa17.6■□□□□ 0.41
TROAP-204ENST00000546776 EPRSP07814 1512 aaKnown RBP17.6■□□□□ 0.41
TROAP-204ENST00000546776 ATP10BO94823 1461 aa17.59■□□□□ 0.41
TROAP-204ENST00000546776 KCNH8Q96L42 1107 aa17.58■□□□□ 0.4
TROAP-204ENST00000546776 ATP1B4Q9UN42 357 aaPredicted RBP17.57■□□□□ 0.4
TROAP-204ENST00000546776 NUP153P49790 1475 aaKnown RBP17.55■□□□□ 0.4
TROAP-204ENST00000546776 CCDC18Q5T9S5 1454 aa17.55■□□□□ 0.4
TROAP-204ENST00000546776 TSPOAP1O95153 1857 aa17.53■□□□□ 0.4
TROAP-204ENST00000546776 PLEKHD1A6NEE1 506 aa17.53■□□□□ 0.4
TROAP-204ENST00000546776 TEX14Q8IWB6 1497 aa17.52■□□□□ 0.4
TROAP-204ENST00000546776 MAP3K1Q13233 1512 aa17.52■□□□□ 0.39
TROAP-204ENST00000546776 CFAP43Q8NDM7 1665 aa17.51■□□□□ 0.39
TROAP-204ENST00000546776 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
TROAP-204ENST00000546776 MAP3K4Q9Y6R4 1608 aa17.5■□□□□ 0.39
TROAP-204ENST00000546776 CD109Q6YHK3 1445 aa17.49■□□□□ 0.39
TROAP-204ENST00000546776 LRRIQ1Q96JM4 1722 aa17.49■□□□□ 0.39
TROAP-204ENST00000546776 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
TROAP-204ENST00000546776 KDM6BO15054 1643 aa17.46■□□□□ 0.39
TROAP-204ENST00000546776 CDK13Q14004 1512 aaKnown RBP17.44■□□□□ 0.38
TROAP-204ENST00000546776 MAGI3Q5TCQ9 1506 aa17.44■□□□□ 0.38
TROAP-204ENST00000546776 PPRC1Q5VV67 1664 aaKnown RBP17.42■□□□□ 0.38
TROAP-204ENST00000546776 MTUS2Q5JR59 1369 aa17.4■□□□□ 0.38
TROAP-204ENST00000546776 ABCA9Q8IUA7 1624 aa17.39■□□□□ 0.38
TROAP-204ENST00000546776 LRRC9Q6ZRR7 1453 aa17.39■□□□□ 0.37
TROAP-204ENST00000546776 EHBP1L1Q8N3D4 1523 aa17.39■□□□□ 0.37
TROAP-204ENST00000546776 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.37
TROAP-204ENST00000546776 TROQ12816 1431 aaPredicted RBP17.34■□□□□ 0.37
TROAP-204ENST00000546776 SUPT6HQ7KZ85 1726 aaKnown RBP17.34■□□□□ 0.37
TROAP-204ENST00000546776 KANK4Q5T7N3 995 aaPredicted RBP17.33■□□□□ 0.36
TROAP-204ENST00000546776 NEO1Q92859 1461 aa17.32■□□□□ 0.36
TROAP-204ENST00000546776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
TROAP-204ENST00000546776 PPARGC1BQ86YN6 1023 aaKnown RBP17.31■□□□□ 0.36
TROAP-204ENST00000546776 KIF14Q15058 1648 aa17.31■□□□□ 0.36
TROAP-204ENST00000546776 ARAP3Q8WWN8 1544 aa17.29■□□□□ 0.36
TROAP-204ENST00000546776 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
TROAP-204ENST00000546776 CFAP74Q9C0B2 1584 aa17.28■□□□□ 0.36
TROAP-204ENST00000546776 FANCAO15360 1455 aa17.26■□□□□ 0.35
TROAP-204ENST00000546776 PLCH2O75038 1416 aa17.26■□□□□ 0.35
TROAP-204ENST00000546776 TTC37Q6PGP7 1564 aa17.26■□□□□ 0.35
TROAP-204ENST00000546776 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
TROAP-204ENST00000546776 NCOA2Q15596 1464 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms