RNA–Protein interactions for RNA: ENST00000546769.1

PKP2-205, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-205ENST00000546769 C19orf67A6NJJ6 358 aa14.73□□□□□ -0.05
PKP2-205ENST00000546769 EVX2Q03828 476 aa14.73□□□□□ -0.05
PKP2-205ENST00000546769 SP7Q8TDD2 431 aaPredicted RBP14.72□□□□□ -0.05
PKP2-205ENST00000546769 HMGXB3Q12766 1538 aa14.71□□□□□ -0.06
PKP2-205ENST00000546769 NESP48681 1621 aa14.68□□□□□ -0.06
PKP2-205ENST00000546769 ATAD2BQ9ULI0 1458 aa14.68□□□□□ -0.06
PKP2-205ENST00000546769 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
PKP2-205ENST00000546769 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
PKP2-205ENST00000546769 LAMC3Q9Y6N6 1575 aa14.62□□□□□ -0.07
PKP2-205ENST00000546769 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
PKP2-205ENST00000546769 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
PKP2-205ENST00000546769 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
PKP2-205ENST00000546769 MIER1Q8N108 512 aa14.53□□□□□ -0.08
PKP2-205ENST00000546769 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
PKP2-205ENST00000546769 NPM1P06748 294 aaKnown RBP eCLIP14.51□□□□□ -0.09
PKP2-205ENST00000546769 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
PKP2-205ENST00000546769 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
PKP2-205ENST00000546769 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
PKP2-205ENST00000546769 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
PKP2-205ENST00000546769 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
PKP2-205ENST00000546769 PLCD3Q8N3E9 789 aa14.46□□□□□ -0.09
PKP2-205ENST00000546769 WDR62O43379 1518 aa14.43□□□□□ -0.1
PKP2-205ENST00000546769 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
PKP2-205ENST00000546769 MRC2Q9UBG0 1479 aa14.41□□□□□ -0.1
PKP2-205ENST00000546769 GABBR2O75899 941 aa14.4□□□□□ -0.1
PKP2-205ENST00000546769 ZNF579Q8NAF0 562 aaKnown RBP14.4□□□□□ -0.1
PKP2-205ENST00000546769 PAK3O75914 559 aaPredicted RBP14.36□□□□□ -0.11
PKP2-205ENST00000546769 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
PKP2-205ENST00000546769 ZBTB47Q9UFB7 747 aaPredicted RBP14.34□□□□□ -0.11
PKP2-205ENST00000546769 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
PKP2-205ENST00000546769 CLCN6P51797 869 aa14.31□□□□□ -0.12
PKP2-205ENST00000546769 RIMBP3CA6NJZ7 1639 aa14.29□□□□□ -0.12
PKP2-205ENST00000546769 RIMBP3BA6NNM3 1639 aa14.29□□□□□ -0.12
PKP2-205ENST00000546769 RIMBP3Q9UFD9 1639 aa14.29□□□□□ -0.12
PKP2-205ENST00000546769 RASEFQ8IZ41 740 aa14.28□□□□□ -0.12
PKP2-205ENST00000546769 PHF12Q96QT6 1004 aa14.27□□□□□ -0.13
PKP2-205ENST00000546769 TSPYL2Q9H2G4 693 aaPredicted RBP14.27□□□□□ -0.13
PKP2-205ENST00000546769 NUBP1P53384 320 aa14.26□□□□□ -0.13
PKP2-205ENST00000546769 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
PKP2-205ENST00000546769 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
PKP2-205ENST00000546769 GALR2O43603 387 aaPredicted RBP14.18□□□□□ -0.14
PKP2-205ENST00000546769 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
PKP2-205ENST00000546769 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
PKP2-205ENST00000546769 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.14
PKP2-205ENST00000546769 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
PKP2-205ENST00000546769 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
PKP2-205ENST00000546769 IFNLR1Q8IU57 520 aaPredicted RBP14.13□□□□□ -0.15
PKP2-205ENST00000546769 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
PKP2-205ENST00000546769 KIF12Q96FN5 646 aa14.1□□□□□ -0.15
PKP2-205ENST00000546769 MS4A3Q96HJ5 214 aa14.1□□□□□ -0.15
PKP2-205ENST00000546769 CFTRP13569 1480 aa14.06□□□□□ -0.16
PKP2-205ENST00000546769 URB2Q14146 1524 aaKnown RBP14.06□□□□□ -0.16
PKP2-205ENST00000546769 DCBLD2Q96PD2 775 aa14.06□□□□□ -0.16
PKP2-205ENST00000546769 MAP3K13O43283 966 aa14.03□□□□□ -0.16
PKP2-205ENST00000546769 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.17
PKP2-205ENST00000546769 CYB5RLQ6IPT4 315 aa14.01□□□□□ -0.17
PKP2-205ENST00000546769 SPOCK2Q92563 424 aa13.99□□□□□ -0.17
PKP2-205ENST00000546769 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
PKP2-205ENST00000546769 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
PKP2-205ENST00000546769 WIZO95785 1651 aa13.98□□□□□ -0.17
PKP2-205ENST00000546769 PRDM2Q13029 1718 aa13.96□□□□□ -0.17
PKP2-205ENST00000546769 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.17
PKP2-205ENST00000546769 RSF1Q96T23 1441 aaPredicted RBP13.96□□□□□ -0.18
PKP2-205ENST00000546769 GSE1Q14687 1217 aa13.95□□□□□ -0.18
PKP2-205ENST00000546769 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
PKP2-205ENST00000546769 TRPC6Q9Y210 931 aa13.93□□□□□ -0.18
PKP2-205ENST00000546769 PCDHB13Q9Y5F0 798 aa13.93□□□□□ -0.18
PKP2-205ENST00000546769 ASTLQ6HA08 431 aaPredicted RBP13.92□□□□□ -0.18
PKP2-205ENST00000546769 CHD1O14646 1710 aa13.91□□□□□ -0.18
PKP2-205ENST00000546769 PYGBP11216 843 aa13.91□□□□□ -0.18
PKP2-205ENST00000546769 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
PKP2-205ENST00000546769 ATMINO43313 823 aaPredicted RBP13.9□□□□□ -0.18
PKP2-205ENST00000546769 IFNL1Q8IU54 200 aa13.88□□□□□ -0.19
PKP2-205ENST00000546769 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
PKP2-205ENST00000546769 TIE1P35590 1138 aa13.87□□□□□ -0.19
PKP2-205ENST00000546769 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
PKP2-205ENST00000546769 ABCC8Q09428 1581 aa13.83□□□□□ -0.19
PKP2-205ENST00000546769 ATN1P54259 1190 aaPredicted RBP13.83□□□□□ -0.2
PKP2-205ENST00000546769 TOPBP1Q92547 1522 aa13.83□□□□□ -0.2
PKP2-205ENST00000546769 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
PKP2-205ENST00000546769 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
PKP2-205ENST00000546769 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
PKP2-205ENST00000546769 TTLL13PA6NNM8 815 aa13.8□□□□□ -0.2
PKP2-205ENST00000546769 LHX8Q68G74 356 aa13.79□□□□□ -0.2
PKP2-205ENST00000546769 TARBP1Q13395 1621 aaKnown RBP13.78□□□□□ -0.2
PKP2-205ENST00000546769 PCDHB8Q9UN66 801 aa13.77□□□□□ -0.21
PKP2-205ENST00000546769 CLASP1Q7Z460 1538 aa13.76□□□□□ -0.21
PKP2-205ENST00000546769 SLC39A7Q92504 469 aa13.76□□□□□ -0.21
PKP2-205ENST00000546769 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
PKP2-205ENST00000546769 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.21
PKP2-205ENST00000546769 C7P10643 843 aa13.73□□□□□ -0.21
PKP2-205ENST00000546769 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
PKP2-205ENST00000546769 METRNQ9UJH8 293 aa13.73□□□□□ -0.21
PKP2-205ENST00000546769 TMEM106CQ9BVX2 250 aa13.71□□□□□ -0.21
PKP2-205ENST00000546769 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
PKP2-205ENST00000546769 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
PKP2-205ENST00000546769 SYNJ1O43426 1573 aa13.7□□□□□ -0.22
PKP2-205ENST00000546769 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
PKP2-205ENST00000546769 POLA1P09884 1462 aaPredicted RBP13.64□□□□□ -0.23
PKP2-205ENST00000546769 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms