RNA–Protein interactions for RNA: ENST00000546656.1

KRT18-203, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-203ENST00000546656 JPH4Q96JJ6 628 aa24.29■■□□□ 1.48
KRT18-203ENST00000546656 CUL7Q14999 1698 aa24.27■■□□□ 1.48
KRT18-203ENST00000546656 KIAA0586Q9BVV6 1533 aa24.18■■□□□ 1.46
KRT18-203ENST00000546656 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
KRT18-203ENST00000546656 ADCY10Q96PN6 1610 aa24.02■■□□□ 1.44
KRT18-203ENST00000546656 IQGAP2Q13576 1575 aa23.99■■□□□ 1.43
KRT18-203ENST00000546656 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
KRT18-203ENST00000546656 NPM1P06748 294 aaKnown RBP eCLIP23.97■■□□□ 1.43
KRT18-203ENST00000546656 RAPGEF2Q9Y4G8 1499 aa23.97■■□□□ 1.43
KRT18-203ENST00000546656 KIF13AQ9H1H9 1805 aa23.96■■□□□ 1.43
KRT18-203ENST00000546656 PTPRGP23470 1445 aa23.94■■□□□ 1.42
KRT18-203ENST00000546656 CARMIL2Q6F5E8 1435 aa23.93■■□□□ 1.42
KRT18-203ENST00000546656 MAPKBP1O60336 1514 aa23.92■■□□□ 1.42
KRT18-203ENST00000546656 TNIKQ9UKE5 1360 aa23.91■■□□□ 1.42
KRT18-203ENST00000546656 ABCC10Q5T3U5 1492 aa23.89■■□□□ 1.42
KRT18-203ENST00000546656 FAM69CQ0P6D2 419 aa23.89■■□□□ 1.41
KRT18-203ENST00000546656 DISP1Q96F81 1524 aa23.88■■□□□ 1.41
KRT18-203ENST00000546656 DIP2BQ9P265 1576 aa23.85■■□□□ 1.41
KRT18-203ENST00000546656 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
KRT18-203ENST00000546656 ABCC2Q92887 1545 aa23.79■■□□□ 1.4
KRT18-203ENST00000546656 KIAA0556O60303 1618 aa23.78■■□□□ 1.4
KRT18-203ENST00000546656 UACAQ9BZF9 1416 aa23.77■■□□□ 1.4
KRT18-203ENST00000546656 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
KRT18-203ENST00000546656 CTTNBP2Q8WZ74 1663 aa23.76■■□□□ 1.39
KRT18-203ENST00000546656 UHRF1BP1LA0JNW5 1464 aa23.75■■□□□ 1.39
KRT18-203ENST00000546656 ASXL2Q76L83 1435 aa23.71■■□□□ 1.39
KRT18-203ENST00000546656 TSPOAP1O95153 1857 aa23.66■■□□□ 1.38
KRT18-203ENST00000546656 PLB1Q6P1J6 1458 aa23.66■■□□□ 1.38
KRT18-203ENST00000546656 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
KRT18-203ENST00000546656 GOLGA3Q08378 1498 aa23.64■■□□□ 1.38
KRT18-203ENST00000546656 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
KRT18-203ENST00000546656 CSRNP3Q8WYN3 585 aa23.63■■□□□ 1.37
KRT18-203ENST00000546656 ZCCHC11Q5TAX3 1644 aaKnown RBP23.62■■□□□ 1.37
KRT18-203ENST00000546656 KDM6BO15054 1643 aa23.59■■□□□ 1.37
KRT18-203ENST00000546656 GLI2P10070 1586 aa23.59■■□□□ 1.37
KRT18-203ENST00000546656 EPRSP07814 1512 aaKnown RBP23.56■■□□□ 1.36
KRT18-203ENST00000546656 ABCA8O94911 1581 aa23.55■■□□□ 1.36
KRT18-203ENST00000546656 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
KRT18-203ENST00000546656 PPRC1Q5VV67 1664 aaKnown RBP23.54■■□□□ 1.36
KRT18-203ENST00000546656 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
KRT18-203ENST00000546656 EEA1Q15075 1411 aa23.52■■□□□ 1.36
KRT18-203ENST00000546656 WDR7Q9Y4E6 1490 aa23.49■■□□□ 1.35
KRT18-203ENST00000546656 MAP3K4Q9Y6R4 1608 aa23.48■■□□□ 1.35
KRT18-203ENST00000546656 SAMD9Q5K651 1589 aa23.45■■□□□ 1.34
KRT18-203ENST00000546656 ARID3CA6NKF2 412 aa23.45■■□□□ 1.34
KRT18-203ENST00000546656 RANGAP1P46060 587 aaPredicted RBP23.44■■□□□ 1.34
KRT18-203ENST00000546656 KCNH8Q96L42 1107 aa23.41■■□□□ 1.34
KRT18-203ENST00000546656 TEX14Q8IWB6 1497 aa23.39■■□□□ 1.34
KRT18-203ENST00000546656 COL17A1Q9UMD9 1497 aaPredicted RBP23.39■■□□□ 1.34
KRT18-203ENST00000546656 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
KRT18-203ENST00000546656 KIF21BO75037 1637 aa23.36■■□□□ 1.33
KRT18-203ENST00000546656 ATP10BO94823 1461 aa23.36■■□□□ 1.33
KRT18-203ENST00000546656 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.33
KRT18-203ENST00000546656 CD109Q6YHK3 1445 aa23.33■■□□□ 1.33
KRT18-203ENST00000546656 EHMT2Q96KQ7 1210 aa23.33■■□□□ 1.33
KRT18-203ENST00000546656 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.32
KRT18-203ENST00000546656 CFAP43Q8NDM7 1665 aa23.32■■□□□ 1.32
KRT18-203ENST00000546656 KDM4FA0A1W2PPD8 638 aa23.3■■□□□ 1.32
KRT18-203ENST00000546656 MAGI3Q5TCQ9 1506 aa23.28■■□□□ 1.32
KRT18-203ENST00000546656 NUP153P49790 1475 aaKnown RBP23.26■■□□□ 1.31
KRT18-203ENST00000546656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
KRT18-203ENST00000546656 HNRNPUL2Q1KMD3 747 aaKnown RBP23.25■■□□□ 1.31
KRT18-203ENST00000546656 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
KRT18-203ENST00000546656 UBTFP17480 764 aaKnown RBP23.2■■□□□ 1.3
KRT18-203ENST00000546656 ABCA9Q8IUA7 1624 aa23.19■■□□□ 1.3
KRT18-203ENST00000546656 ADGRL1O94910 1474 aa23.17■■□□□ 1.3
KRT18-203ENST00000546656 ARAP3Q8WWN8 1544 aa23.1■■□□□ 1.29
KRT18-203ENST00000546656 PLEKHD1A6NEE1 506 aa23.09■■□□□ 1.29
KRT18-203ENST00000546656 ARHGAP35Q9NRY4 1499 aa23.08■■□□□ 1.29
KRT18-203ENST00000546656 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.28
KRT18-203ENST00000546656 NEO1Q92859 1461 aa23.04■■□□□ 1.28
KRT18-203ENST00000546656 PHLDB1Q86UU1 1377 aa23.03■■□□□ 1.28
KRT18-203ENST00000546656 ATP1B4Q9UN42 357 aaPredicted RBP23.03■■□□□ 1.28
KRT18-203ENST00000546656 RAPGEF3O95398 923 aa23.02■■□□□ 1.28
KRT18-203ENST00000546656 FMN1Q68DA7 1419 aa23.01■■□□□ 1.27
KRT18-203ENST00000546656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.01■■□□□ 1.27
KRT18-203ENST00000546656 TTC37Q6PGP7 1564 aa23■■□□□ 1.27
KRT18-203ENST00000546656 HECW1Q76N89 1606 aa22.99■■□□□ 1.27
KRT18-203ENST00000546656 FRMPD1Q5SYB0 1578 aa22.97■■□□□ 1.27
KRT18-203ENST00000546656 FANCAO15360 1455 aa22.94■■□□□ 1.26
KRT18-203ENST00000546656 AKNAQ7Z591 1439 aa22.92■■□□□ 1.26
KRT18-203ENST00000546656 DENND4BO75064 1496 aaPredicted RBP22.9■■□□□ 1.26
KRT18-203ENST00000546656 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.26
KRT18-203ENST00000546656 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
KRT18-203ENST00000546656 RICTORQ6R327 1708 aa22.86■■□□□ 1.25
KRT18-203ENST00000546656 KIF14Q15058 1648 aa22.86■■□□□ 1.25
KRT18-203ENST00000546656 PLCH2O75038 1416 aa22.85■■□□□ 1.25
KRT18-203ENST00000546656 CDK11AQ9UQ88 783 aaPredicted RBP22.85■■□□□ 1.25
KRT18-203ENST00000546656 PCF11O94913 1555 aaKnown RBP22.84■■□□□ 1.25
KRT18-203ENST00000546656 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
KRT18-203ENST00000546656 ARHGEF40Q8TER5 1519 aa22.82■■□□□ 1.24
KRT18-203ENST00000546656 CASKIN1Q8WXD9 1431 aa22.81■■□□□ 1.24
KRT18-203ENST00000546656 ARID4BQ4LE39 1312 aaPredicted RBP22.81■■□□□ 1.24
KRT18-203ENST00000546656 HECW2Q9P2P5 1572 aa22.8■■□□□ 1.24
KRT18-203ENST00000546656 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
KRT18-203ENST00000546656 CLIP1P30622 1438 aa22.79■■□□□ 1.24
KRT18-203ENST00000546656 SCAPERQ9BY12 1400 aa22.79■■□□□ 1.24
KRT18-203ENST00000546656 ADAMTSL3P82987 1691 aa22.77■■□□□ 1.24
KRT18-203ENST00000546656 ZMYM4Q5VZL5 1548 aa22.77■■□□□ 1.24
KRT18-203ENST00000546656 POGZQ7Z3K3 1410 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms