RNA–Protein interactions for RNA: ENST00000546508.1

LINC00609-201, long intergenic non-protein coding RNA 609, humanhuman

TSL 3 BASIC

Gene LINC00609, Length 583 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00609-201ENST00000546508 NUP160Q12769 1436 aa16.92■□□□□ 0.3
LINC00609-201ENST00000546508 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
LINC00609-201ENST00000546508 KIF21BO75037 1637 aa16.84■□□□□ 0.29
LINC00609-201ENST00000546508 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
LINC00609-201ENST00000546508 KIAA0586Q9BVV6 1533 aa16.81■□□□□ 0.28
LINC00609-201ENST00000546508 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
LINC00609-201ENST00000546508 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
LINC00609-201ENST00000546508 IQGAP2Q13576 1575 aa16.79■□□□□ 0.28
LINC00609-201ENST00000546508 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
LINC00609-201ENST00000546508 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
LINC00609-201ENST00000546508 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
LINC00609-201ENST00000546508 EHMT2Q96KQ7 1210 aa16.77■□□□□ 0.28
LINC00609-201ENST00000546508 GOLGA3Q08378 1498 aa16.76■□□□□ 0.27
LINC00609-201ENST00000546508 JPH4Q96JJ6 628 aa16.73■□□□□ 0.27
LINC00609-201ENST00000546508 PRG4Q92954 1404 aaPredicted RBP16.72■□□□□ 0.27
LINC00609-201ENST00000546508 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
LINC00609-201ENST00000546508 UBTFP17480 764 aaKnown RBP16.69■□□□□ 0.26
LINC00609-201ENST00000546508 UGGT2Q9NYU1 1516 aa16.67■□□□□ 0.26
LINC00609-201ENST00000546508 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
LINC00609-201ENST00000546508 CARMIL2Q6F5E8 1435 aa16.65■□□□□ 0.26
LINC00609-201ENST00000546508 KIAA0556O60303 1618 aa16.63■□□□□ 0.25
LINC00609-201ENST00000546508 DISP1Q96F81 1524 aa16.62■□□□□ 0.25
LINC00609-201ENST00000546508 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
LINC00609-201ENST00000546508 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
LINC00609-201ENST00000546508 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
LINC00609-201ENST00000546508 TTBK1Q5TCY1 1321 aaPredicted RBP16.58■□□□□ 0.24
LINC00609-201ENST00000546508 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
LINC00609-201ENST00000546508 TNIKQ9UKE5 1360 aa16.56■□□□□ 0.24
LINC00609-201ENST00000546508 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
LINC00609-201ENST00000546508 PTPRGP23470 1445 aa16.53■□□□□ 0.24
LINC00609-201ENST00000546508 P3H3Q8IVL6 736 aa16.53■□□□□ 0.24
LINC00609-201ENST00000546508 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
LINC00609-201ENST00000546508 FHOD3Q2V2M9 1422 aa16.49■□□□□ 0.23
LINC00609-201ENST00000546508 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
LINC00609-201ENST00000546508 ADCY10Q96PN6 1610 aa16.46■□□□□ 0.23
LINC00609-201ENST00000546508 CLIP1P30622 1438 aa16.45■□□□□ 0.22
LINC00609-201ENST00000546508 UACAQ9BZF9 1416 aa16.44■□□□□ 0.22
LINC00609-201ENST00000546508 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
LINC00609-201ENST00000546508 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
LINC00609-201ENST00000546508 ABCC2Q92887 1545 aa16.42■□□□□ 0.22
LINC00609-201ENST00000546508 ABCA8O94911 1581 aa16.41■□□□□ 0.22
LINC00609-201ENST00000546508 UHRF1BP1LA0JNW5 1464 aa16.4■□□□□ 0.22
LINC00609-201ENST00000546508 RAPGEF6Q8TEU7 1601 aa16.39■□□□□ 0.21
LINC00609-201ENST00000546508 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
LINC00609-201ENST00000546508 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00609-201ENST00000546508 MSH5O43196 834 aa16.35■□□□□ 0.21
LINC00609-201ENST00000546508 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
LINC00609-201ENST00000546508 KDM5BQ9UGL1 1544 aa16.33■□□□□ 0.2
LINC00609-201ENST00000546508 ARID3CA6NKF2 412 aa16.32■□□□□ 0.2
LINC00609-201ENST00000546508 HECW1Q76N89 1606 aa16.31■□□□□ 0.2
LINC00609-201ENST00000546508 PCF11O94913 1555 aaKnown RBP16.31■□□□□ 0.2
LINC00609-201ENST00000546508 PIAS4Q8N2W9 510 aaPredicted RBP16.31■□□□□ 0.2
LINC00609-201ENST00000546508 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
LINC00609-201ENST00000546508 MAPKBP1O60336 1514 aa16.3■□□□□ 0.2
LINC00609-201ENST00000546508 NUP153P49790 1475 aaKnown RBP16.3■□□□□ 0.2
LINC00609-201ENST00000546508 ATP1B4Q9UN42 357 aaPredicted RBP16.3■□□□□ 0.2
LINC00609-201ENST00000546508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
LINC00609-201ENST00000546508 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
LINC00609-201ENST00000546508 ATP10BO94823 1461 aa16.26■□□□□ 0.19
LINC00609-201ENST00000546508 ASXL2Q76L83 1435 aa16.26■□□□□ 0.19
LINC00609-201ENST00000546508 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
LINC00609-201ENST00000546508 FYCO1Q9BQS8 1478 aa16.25■□□□□ 0.19
LINC00609-201ENST00000546508 ADRA2BP18089 450 aa16.25■□□□□ 0.19
LINC00609-201ENST00000546508 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
LINC00609-201ENST00000546508 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
LINC00609-201ENST00000546508 LRRIQ1Q96JM4 1722 aa16.23■□□□□ 0.19
LINC00609-201ENST00000546508 EPRSP07814 1512 aaKnown RBP16.22■□□□□ 0.19
LINC00609-201ENST00000546508 WDR7Q9Y4E6 1490 aa16.22■□□□□ 0.19
LINC00609-201ENST00000546508 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
LINC00609-201ENST00000546508 DIP2BQ9P265 1576 aa16.21■□□□□ 0.18
LINC00609-201ENST00000546508 CCDC18Q5T9S5 1454 aa16.2■□□□□ 0.18
LINC00609-201ENST00000546508 KIF13AQ9H1H9 1805 aa16.19■□□□□ 0.18
LINC00609-201ENST00000546508 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
LINC00609-201ENST00000546508 FAM69CQ0P6D2 419 aa16.15■□□□□ 0.18
LINC00609-201ENST00000546508 PLEKHD1A6NEE1 506 aa16.14■□□□□ 0.17
LINC00609-201ENST00000546508 KCNH8Q96L42 1107 aa16.14■□□□□ 0.17
LINC00609-201ENST00000546508 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
LINC00609-201ENST00000546508 GLI2P10070 1586 aa16.12■□□□□ 0.17
LINC00609-201ENST00000546508 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
LINC00609-201ENST00000546508 TSPOAP1O95153 1857 aa16.1■□□□□ 0.17
LINC00609-201ENST00000546508 TROQ12816 1431 aaPredicted RBP16.09■□□□□ 0.17
LINC00609-201ENST00000546508 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
LINC00609-201ENST00000546508 KIF14Q15058 1648 aa16.08■□□□□ 0.17
LINC00609-201ENST00000546508 MAP3K4Q9Y6R4 1608 aa16.08■□□□□ 0.17
LINC00609-201ENST00000546508 MAGI3Q5TCQ9 1506 aa16.08■□□□□ 0.16
LINC00609-201ENST00000546508 ABCA9Q8IUA7 1624 aa16.06■□□□□ 0.16
LINC00609-201ENST00000546508 MTUS2Q5JR59 1369 aa16.05■□□□□ 0.16
LINC00609-201ENST00000546508 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
LINC00609-201ENST00000546508 APLP2Q06481 763 aa16.04■□□□□ 0.16
LINC00609-201ENST00000546508 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
LINC00609-201ENST00000546508 EHBP1L1Q8N3D4 1523 aa16.04■□□□□ 0.16
LINC00609-201ENST00000546508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.04■□□□□ 0.16
LINC00609-201ENST00000546508 CD109Q6YHK3 1445 aa16.02■□□□□ 0.16
LINC00609-201ENST00000546508 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.15
LINC00609-201ENST00000546508 MAP3K1Q13233 1512 aa16.01■□□□□ 0.15
LINC00609-201ENST00000546508 MYO5CQ9NQX4 1742 aa15.99■□□□□ 0.15
LINC00609-201ENST00000546508 TEX14Q8IWB6 1497 aa15.99■□□□□ 0.15
LINC00609-201ENST00000546508 LRRC9Q6ZRR7 1453 aa15.98■□□□□ 0.15
LINC00609-201ENST00000546508 SUPT6HQ7KZ85 1726 aaKnown RBP15.98■□□□□ 0.15
LINC00609-201ENST00000546508 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms