RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 IGF1RP08069 1367 aa32.61■■■□□ 2.81
CHPT1-202ENST00000546490 JPH4Q96JJ6 628 aa32.61■■■□□ 2.81
CHPT1-202ENST00000546490 KIAA0586Q9BVV6 1533 aa32.56■■■□□ 2.8
CHPT1-202ENST00000546490 KIF13AQ9H1H9 1805 aa32.48■■■□□ 2.79
CHPT1-202ENST00000546490 CARMIL1Q5VZK9 1371 aa32.45■■■□□ 2.78
CHPT1-202ENST00000546490 ADCY10Q96PN6 1610 aa32.4■■■□□ 2.78
CHPT1-202ENST00000546490 IQGAP2Q13576 1575 aa32.36■■■□□ 2.77
CHPT1-202ENST00000546490 MAPKBP1O60336 1514 aa32.35■■■□□ 2.77
CHPT1-202ENST00000546490 NPM1P06748 294 aaKnown RBP eCLIP32.26■■■□□ 2.75
CHPT1-202ENST00000546490 CARMIL2Q6F5E8 1435 aa32.25■■■□□ 2.75
CHPT1-202ENST00000546490 DIP2BQ9P265 1576 aa32.24■■■□□ 2.75
CHPT1-202ENST00000546490 RAPGEF2Q9Y4G8 1499 aa32.23■■■□□ 2.75
CHPT1-202ENST00000546490 ABCC10Q5T3U5 1492 aa32.23■■■□□ 2.75
CHPT1-202ENST00000546490 PTPRGP23470 1445 aa32.18■■■□□ 2.74
CHPT1-202ENST00000546490 CTTNBP2Q8WZ74 1663 aa32.16■■■□□ 2.74
CHPT1-202ENST00000546490 TNIKQ9UKE5 1360 aa32.16■■■□□ 2.74
CHPT1-202ENST00000546490 UGGT2Q9NYU1 1516 aa32.11■■■□□ 2.73
CHPT1-202ENST00000546490 DISP1Q96F81 1524 aa32.1■■■□□ 2.73
CHPT1-202ENST00000546490 FAM69CQ0P6D2 419 aa32.1■■■□□ 2.73
CHPT1-202ENST00000546490 ABCC2Q92887 1545 aa32.07■■■□□ 2.72
CHPT1-202ENST00000546490 KIAA0556O60303 1618 aa32.07■■■□□ 2.72
CHPT1-202ENST00000546490 TTBK1Q5TCY1 1321 aaPredicted RBP32.05■■■□□ 2.72
CHPT1-202ENST00000546490 TSPOAP1O95153 1857 aa32.03■■■□□ 2.72
CHPT1-202ENST00000546490 UHRF1BP1LA0JNW5 1464 aa32.03■■■□□ 2.72
CHPT1-202ENST00000546490 UACAQ9BZF9 1416 aa31.98■■■□□ 2.71
CHPT1-202ENST00000546490 KDM6BO15054 1643 aa31.93■■■□□ 2.7
CHPT1-202ENST00000546490 PLB1Q6P1J6 1458 aa31.91■■■□□ 2.7
CHPT1-202ENST00000546490 PRXQ9BXM0 1461 aa31.91■■■□□ 2.7
CHPT1-202ENST00000546490 ASXL2Q76L83 1435 aa31.91■■■□□ 2.7
CHPT1-202ENST00000546490 AEBP2Q6ZN18 517 aaPredicted RBP31.9■■■□□ 2.7
CHPT1-202ENST00000546490 ZCCHC11Q5TAX3 1644 aaKnown RBP31.89■■■□□ 2.7
CHPT1-202ENST00000546490 GOLGA3Q08378 1498 aa31.88■■■□□ 2.69
CHPT1-202ENST00000546490 GLI2P10070 1586 aa31.88■■■□□ 2.69
CHPT1-202ENST00000546490 KDM5BQ9UGL1 1544 aa31.87■■■□□ 2.69
CHPT1-202ENST00000546490 PPRC1Q5VV67 1664 aaKnown RBP31.82■■■□□ 2.68
CHPT1-202ENST00000546490 MAP3K4Q9Y6R4 1608 aa31.75■■■□□ 2.67
CHPT1-202ENST00000546490 EPRSP07814 1512 aaKnown RBP31.74■■■□□ 2.67
CHPT1-202ENST00000546490 ABCA8O94911 1581 aa31.73■■■□□ 2.67
CHPT1-202ENST00000546490 WDR7Q9Y4E6 1490 aa31.66■■■□□ 2.66
CHPT1-202ENST00000546490 EEA1Q15075 1411 aa31.65■■■□□ 2.66
CHPT1-202ENST00000546490 TEX14Q8IWB6 1497 aa31.62■■■□□ 2.65
CHPT1-202ENST00000546490 SAMD9Q5K651 1589 aa31.61■■■□□ 2.65
CHPT1-202ENST00000546490 CSRNP3Q8WYN3 585 aa31.61■■■□□ 2.65
CHPT1-202ENST00000546490 CFAP43Q8NDM7 1665 aa31.57■■■□□ 2.65
CHPT1-202ENST00000546490 FAM9AQ8IZU1 332 aaPredicted RBP31.5■■■□□ 2.63
CHPT1-202ENST00000546490 KIF21BO75037 1637 aa31.46■■■□□ 2.63
CHPT1-202ENST00000546490 RAPGEF6Q8TEU7 1601 aa31.46■■■□□ 2.63
CHPT1-202ENST00000546490 P3H3Q8IVL6 736 aa31.43■■■□□ 2.62
CHPT1-202ENST00000546490 COL17A1Q9UMD9 1497 aaPredicted RBP31.42■■■□□ 2.62
CHPT1-202ENST00000546490 MAGI3Q5TCQ9 1506 aa31.42■■■□□ 2.62
CHPT1-202ENST00000546490 CD109Q6YHK3 1445 aa31.4■■■□□ 2.62
CHPT1-202ENST00000546490 ATP10BO94823 1461 aa31.37■■■□□ 2.61
CHPT1-202ENST00000546490 KCNH8Q96L42 1107 aa31.35■■■□□ 2.61
CHPT1-202ENST00000546490 KDM4FA0A1W2PPD8 638 aa31.33■■■□□ 2.61
CHPT1-202ENST00000546490 EFCAB5A4FU69 1503 aa31.33■■■□□ 2.61
CHPT1-202ENST00000546490 ABCA9Q8IUA7 1624 aa31.32■■■□□ 2.6
CHPT1-202ENST00000546490 ARID3CA6NKF2 412 aa31.3■■■□□ 2.6
CHPT1-202ENST00000546490 FHOD3Q2V2M9 1422 aa31.29■■■□□ 2.6
CHPT1-202ENST00000546490 ADGRL1O94910 1474 aa31.27■■■□□ 2.6
CHPT1-202ENST00000546490 NUP153P49790 1475 aaKnown RBP31.26■■■□□ 2.59
CHPT1-202ENST00000546490 RANGAP1P46060 587 aaPredicted RBP31.24■■■□□ 2.59
CHPT1-202ENST00000546490 ARAP3Q8WWN8 1544 aa31.17■■■□□ 2.58
CHPT1-202ENST00000546490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.16■■■□□ 2.58
CHPT1-202ENST00000546490 HNRNPUL2Q1KMD3 747 aaKnown RBP31.16■■■□□ 2.58
CHPT1-202ENST00000546490 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
CHPT1-202ENST00000546490 PHLDB1Q86UU1 1377 aa31.09■■■□□ 2.57
CHPT1-202ENST00000546490 NEO1Q92859 1461 aa31.08■■■□□ 2.57
CHPT1-202ENST00000546490 CFAP74Q9C0B2 1584 aa31.03■■■□□ 2.56
CHPT1-202ENST00000546490 UBTFP17480 764 aaKnown RBP31.02■■■□□ 2.56
CHPT1-202ENST00000546490 HECW1Q76N89 1606 aa31.02■■■□□ 2.56
CHPT1-202ENST00000546490 CDK13Q14004 1512 aaKnown RBP30.98■■■□□ 2.55
CHPT1-202ENST00000546490 FRMPD1Q5SYB0 1578 aa30.98■■■□□ 2.55
CHPT1-202ENST00000546490 TTC37Q6PGP7 1564 aa30.98■■■□□ 2.55
CHPT1-202ENST00000546490 PLEKHD1A6NEE1 506 aa30.98■■■□□ 2.55
CHPT1-202ENST00000546490 EHMT2Q96KQ7 1210 aa30.98■■■□□ 2.55
CHPT1-202ENST00000546490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.98■■■□□ 2.55
CHPT1-202ENST00000546490 FMN1Q68DA7 1419 aa30.98■■■□□ 2.55
CHPT1-202ENST00000546490 ARHGAP35Q9NRY4 1499 aa30.96■■■□□ 2.55
CHPT1-202ENST00000546490 RICTORQ6R327 1708 aa30.92■■■□□ 2.54
CHPT1-202ENST00000546490 FANCAO15360 1455 aa30.89■■■□□ 2.53
CHPT1-202ENST00000546490 RAPGEF3O95398 923 aa30.86■■■□□ 2.53
CHPT1-202ENST00000546490 ARHGEF40Q8TER5 1519 aa30.86■■■□□ 2.53
CHPT1-202ENST00000546490 MYO5CQ9NQX4 1742 aa30.84■■■□□ 2.53
CHPT1-202ENST00000546490 HECW2Q9P2P5 1572 aa30.83■■■□□ 2.53
CHPT1-202ENST00000546490 DENND4BO75064 1496 aaPredicted RBP30.83■■■□□ 2.53
CHPT1-202ENST00000546490 AKNAQ7Z591 1439 aa30.83■■■□□ 2.53
CHPT1-202ENST00000546490 LRRIQ1Q96JM4 1722 aa30.83■■■□□ 2.53
CHPT1-202ENST00000546490 ADAMTSL3P82987 1691 aa30.81■■■□□ 2.52
CHPT1-202ENST00000546490 KIF14Q15058 1648 aa30.8■■■□□ 2.52
CHPT1-202ENST00000546490 BCORL1Q5H9F3 1711 aa30.79■■■□□ 2.52
CHPT1-202ENST00000546490 ZMYM4Q5VZL5 1548 aa30.78■■■□□ 2.52
CHPT1-202ENST00000546490 ATP1B4Q9UN42 357 aaPredicted RBP30.78■■■□□ 2.52
CHPT1-202ENST00000546490 PCF11O94913 1555 aaKnown RBP30.73■■■□□ 2.51
CHPT1-202ENST00000546490 CDK11AQ9UQ88 783 aaPredicted RBP30.72■■■□□ 2.51
CHPT1-202ENST00000546490 PLCH2O75038 1416 aa30.72■■■□□ 2.51
CHPT1-202ENST00000546490 MADDQ8WXG6 1647 aa30.69■■■□□ 2.5
CHPT1-202ENST00000546490 ZFYVE16Q7Z3T8 1539 aa30.69■■■□□ 2.5
CHPT1-202ENST00000546490 CLIP1P30622 1438 aa30.69■■■□□ 2.5
CHPT1-202ENST00000546490 TROQ12816 1431 aaPredicted RBP30.69■■■□□ 2.5
CHPT1-202ENST00000546490 CCDC18Q5T9S5 1454 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms