RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-223ENST00000546312 CHD1O14646 1710 aa14.79□□□□□ -0.04
SLC3A2-223ENST00000546312 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.05
SLC3A2-223ENST00000546312 DNAJC5Q9H3Z4 198 aa14.77□□□□□ -0.05
SLC3A2-223ENST00000546312 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
SLC3A2-223ENST00000546312 IGF1RP08069 1367 aa14.75□□□□□ -0.05
SLC3A2-223ENST00000546312 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
SLC3A2-223ENST00000546312 CUL7Q14999 1698 aa14.72□□□□□ -0.05
SLC3A2-223ENST00000546312 ADAMTS12P58397 1594 aa14.71□□□□□ -0.05
SLC3A2-223ENST00000546312 EEA1Q15075 1411 aa14.68□□□□□ -0.06
SLC3A2-223ENST00000546312 RUSC2Q8N2Y8 1516 aa14.68□□□□□ -0.06
SLC3A2-223ENST00000546312 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
SLC3A2-223ENST00000546312 GRIN2AQ12879 1464 aa14.67□□□□□ -0.06
SLC3A2-223ENST00000546312 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
SLC3A2-223ENST00000546312 RAPGEF2Q9Y4G8 1499 aa14.61□□□□□ -0.07
SLC3A2-223ENST00000546312 NUP160Q12769 1436 aa14.58□□□□□ -0.07
SLC3A2-223ENST00000546312 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.08
SLC3A2-223ENST00000546312 FAM9AQ8IZU1 332 aaPredicted RBP14.58□□□□□ -0.08
SLC3A2-223ENST00000546312 CEP170Q5SW79 1584 aa14.57□□□□□ -0.08
SLC3A2-223ENST00000546312 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
SLC3A2-223ENST00000546312 PRXQ9BXM0 1461 aa14.55□□□□□ -0.08
SLC3A2-223ENST00000546312 KIAA0586Q9BVV6 1533 aa14.53□□□□□ -0.08
SLC3A2-223ENST00000546312 JPH4Q96JJ6 628 aa14.53□□□□□ -0.08
SLC3A2-223ENST00000546312 TRIM26Q12899 539 aaPredicted RBP14.52□□□□□ -0.09
SLC3A2-223ENST00000546312 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
SLC3A2-223ENST00000546312 RIMBP3CA6NJZ7 1639 aa14.49□□□□□ -0.09
SLC3A2-223ENST00000546312 RIMBP3BA6NNM3 1639 aa14.49□□□□□ -0.09
SLC3A2-223ENST00000546312 SHROOM2Q13796 1616 aa14.49□□□□□ -0.09
SLC3A2-223ENST00000546312 RIMBP3Q9UFD9 1639 aa14.49□□□□□ -0.09
SLC3A2-223ENST00000546312 ZBTB22O15209 634 aa14.49□□□□□ -0.09
SLC3A2-223ENST00000546312 ARHGEF11O15085 1522 aa14.48□□□□□ -0.09
SLC3A2-223ENST00000546312 CTTNBP2Q8WZ74 1663 aa14.48□□□□□ -0.09
SLC3A2-223ENST00000546312 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
SLC3A2-223ENST00000546312 KIF21BO75037 1637 aa14.47□□□□□ -0.09
SLC3A2-223ENST00000546312 HRCP23327 699 aa14.46□□□□□ -0.09
SLC3A2-223ENST00000546312 IQGAP2Q13576 1575 aa14.45□□□□□ -0.1
SLC3A2-223ENST00000546312 PCGF6Q9BYE7 350 aa14.45□□□□□ -0.1
SLC3A2-223ENST00000546312 PRG4Q92954 1404 aaPredicted RBP14.43□□□□□ -0.1
SLC3A2-223ENST00000546312 CARMIL2Q6F5E8 1435 aa14.41□□□□□ -0.1
SLC3A2-223ENST00000546312 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
SLC3A2-223ENST00000546312 CYB5RLQ6IPT4 315 aa14.41□□□□□ -0.1
SLC3A2-223ENST00000546312 GOLGA3Q08378 1498 aa14.39□□□□□ -0.11
SLC3A2-223ENST00000546312 UGGT2Q9NYU1 1516 aa14.38□□□□□ -0.11
SLC3A2-223ENST00000546312 ZEB1P37275 1124 aaPredicted RBP14.37□□□□□ -0.11
SLC3A2-223ENST00000546312 ERCC6L2Q5T890 1561 aa14.36□□□□□ -0.11
SLC3A2-223ENST00000546312 ARAP1Q96P48 1450 aa14.36□□□□□ -0.11
SLC3A2-223ENST00000546312 TNIKQ9UKE5 1360 aa14.33□□□□□ -0.12
SLC3A2-223ENST00000546312 PTPRGP23470 1445 aa14.31□□□□□ -0.12
SLC3A2-223ENST00000546312 DISP1Q96F81 1524 aa14.31□□□□□ -0.12
SLC3A2-223ENST00000546312 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
SLC3A2-223ENST00000546312 KIAA0556O60303 1618 aa14.29□□□□□ -0.12
SLC3A2-223ENST00000546312 NPM1P06748 294 aaKnown RBP eCLIP14.27□□□□□ -0.13
SLC3A2-223ENST00000546312 RANGAP1P46060 587 aaPredicted RBP14.27□□□□□ -0.13
SLC3A2-223ENST00000546312 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
SLC3A2-223ENST00000546312 P3H3Q8IVL6 736 aa14.25□□□□□ -0.13
SLC3A2-223ENST00000546312 SAMD9Q5K651 1589 aa14.25□□□□□ -0.13
SLC3A2-223ENST00000546312 EFCAB5A4FU69 1503 aa14.24□□□□□ -0.13
SLC3A2-223ENST00000546312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.131e-6■■■□□ 16.9
SLC3A2-223ENST00000546312 UACAQ9BZF9 1416 aa14.2□□□□□ -0.14
SLC3A2-223ENST00000546312 UHRF1BP1LA0JNW5 1464 aa14.18□□□□□ -0.14
SLC3A2-223ENST00000546312 ADCY10Q96PN6 1610 aa14.17□□□□□ -0.14
SLC3A2-223ENST00000546312 ABCC2Q92887 1545 aa14.15□□□□□ -0.14
SLC3A2-223ENST00000546312 ARHGAP35Q9NRY4 1499 aa14.14□□□□□ -0.15
SLC3A2-223ENST00000546312 FHOD3Q2V2M9 1422 aa14.14□□□□□ -0.15
SLC3A2-223ENST00000546312 FMN1Q68DA7 1419 aa14.14□□□□□ -0.15
SLC3A2-223ENST00000546312 ABCA8O94911 1581 aa14.13□□□□□ -0.15
SLC3A2-223ENST00000546312 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
SLC3A2-223ENST00000546312 CLIP1P30622 1438 aa14.13□□□□□ -0.15
SLC3A2-223ENST00000546312 PLB1Q6P1J6 1458 aa14.12□□□□□ -0.15
SLC3A2-223ENST00000546312 RAPGEF6Q8TEU7 1601 aa14.12□□□□□ -0.15
SLC3A2-223ENST00000546312 CEP162Q5TB80 1403 aa14.11□□□□□ -0.15
SLC3A2-223ENST00000546312 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
SLC3A2-223ENST00000546312 KDM5BQ9UGL1 1544 aa14.1□□□□□ -0.15
SLC3A2-223ENST00000546312 MAPKBP1O60336 1514 aa14.08□□□□□ -0.16
SLC3A2-223ENST00000546312 ZCCHC11Q5TAX3 1644 aaKnown RBP14.08□□□□□ -0.16
SLC3A2-223ENST00000546312 ATP1B4Q9UN42 357 aaPredicted RBP14.06□□□□□ -0.16
SLC3A2-223ENST00000546312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
SLC3A2-223ENST00000546312 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
SLC3A2-223ENST00000546312 ATP10BO94823 1461 aa14.04□□□□□ -0.16
SLC3A2-223ENST00000546312 HECW1Q76N89 1606 aa14.02□□□□□ -0.16
SLC3A2-223ENST00000546312 ASXL2Q76L83 1435 aa14.02□□□□□ -0.16
SLC3A2-223ENST00000546312 PLEKHD1A6NEE1 506 aa14.02□□□□□ -0.17
SLC3A2-223ENST00000546312 CDK11AQ9UQ88 783 aaPredicted RBP14.02□□□□□ -0.17
SLC3A2-223ENST00000546312 NUP153P49790 1475 aaKnown RBP14.01□□□□□ -0.17
SLC3A2-223ENST00000546312 CASKIN1Q8WXD9 1431 aa14□□□□□ -0.17
SLC3A2-223ENST00000546312 KIF13AQ9H1H9 1805 aa14□□□□□ -0.17
SLC3A2-223ENST00000546312 ARID3CA6NKF2 412 aa14□□□□□ -0.17
SLC3A2-223ENST00000546312 FAM69CQ0P6D2 419 aa14□□□□□ -0.17
SLC3A2-223ENST00000546312 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
SLC3A2-223ENST00000546312 APLP2Q06481 763 aa13.99□□□□□ -0.17
SLC3A2-223ENST00000546312 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
SLC3A2-223ENST00000546312 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
SLC3A2-223ENST00000546312 FYCO1Q9BQS8 1478 aa13.97□□□□□ -0.17
SLC3A2-223ENST00000546312 WDR7Q9Y4E6 1490 aa13.97□□□□□ -0.17
SLC3A2-223ENST00000546312 EPRSP07814 1512 aaKnown RBP13.96□□□□□ -0.17
SLC3A2-223ENST00000546312 GLI2P10070 1586 aa13.96□□□□□ -0.18
SLC3A2-223ENST00000546312 CCDC18Q5T9S5 1454 aa13.95□□□□□ -0.18
SLC3A2-223ENST00000546312 DIP2BQ9P265 1576 aa13.95□□□□□ -0.18
SLC3A2-223ENST00000546312 PCF11O94913 1555 aaKnown RBP13.94□□□□□ -0.18
SLC3A2-223ENST00000546312 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
SLC3A2-223ENST00000546312 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms