RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 JPH4Q96JJ6 628 aa16.84■□□□□ 0.29
LINC00939-203ENST00000545784 EHMT2Q96KQ7 1210 aa16.82■□□□□ 0.28
LINC00939-203ENST00000545784 GOLGA3Q08378 1498 aa16.81■□□□□ 0.28
LINC00939-203ENST00000545784 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
LINC00939-203ENST00000545784 UBTFP17480 764 aaKnown RBP16.77■□□□□ 0.27
LINC00939-203ENST00000545784 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
LINC00939-203ENST00000545784 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
LINC00939-203ENST00000545784 LOC105371045A0A1W2PR82 267 aa16.75■□□□□ 0.27
LINC00939-203ENST00000545784 ARHGEF11O15085 1522 aa16.74■□□□□ 0.27
LINC00939-203ENST00000545784 ERCC6L2Q5T890 1561 aa16.73■□□□□ 0.27
LINC00939-203ENST00000545784 UGGT2Q9NYU1 1516 aa16.72■□□□□ 0.27
LINC00939-203ENST00000545784 CTTNBP2Q8WZ74 1663 aa16.71■□□□□ 0.27
LINC00939-203ENST00000545784 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
LINC00939-203ENST00000545784 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
LINC00939-203ENST00000545784 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
LINC00939-203ENST00000545784 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
LINC00939-203ENST00000545784 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
LINC00939-203ENST00000545784 CARMIL2Q6F5E8 1435 aa16.65■□□□□ 0.26
LINC00939-203ENST00000545784 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
LINC00939-203ENST00000545784 RANGAP1P46060 587 aaPredicted RBP16.65■□□□□ 0.26
LINC00939-203ENST00000545784 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
LINC00939-203ENST00000545784 P3H3Q8IVL6 736 aa16.61■□□□□ 0.25
LINC00939-203ENST00000545784 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
LINC00939-203ENST00000545784 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
LINC00939-203ENST00000545784 PTPRGP23470 1445 aa16.59■□□□□ 0.25
LINC00939-203ENST00000545784 ARHGAP35Q9NRY4 1499 aa16.57■□□□□ 0.24
LINC00939-203ENST00000545784 EFCAB5A4FU69 1503 aa16.55■□□□□ 0.24
LINC00939-203ENST00000545784 TTBK1Q5TCY1 1321 aaPredicted RBP16.54■□□□□ 0.24
LINC00939-203ENST00000545784 CLIP1P30622 1438 aa16.54■□□□□ 0.24
LINC00939-203ENST00000545784 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
LINC00939-203ENST00000545784 CEP162Q5TB80 1403 aa16.52■□□□□ 0.24
LINC00939-203ENST00000545784 HRCP23327 699 aa16.49■□□□□ 0.23
LINC00939-203ENST00000545784 UACAQ9BZF9 1416 aa16.48■□□□□ 0.23
LINC00939-203ENST00000545784 PLB1Q6P1J6 1458 aa16.46■□□□□ 0.23
LINC00939-203ENST00000545784 UHRF1BP1LA0JNW5 1464 aa16.45■□□□□ 0.22
LINC00939-203ENST00000545784 ABCA8O94911 1581 aa16.44■□□□□ 0.22
LINC00939-203ENST00000545784 AEBP2Q6ZN18 517 aaPredicted RBP16.43■□□□□ 0.22
LINC00939-203ENST00000545784 ADCY10Q96PN6 1610 aa16.43■□□□□ 0.22
LINC00939-203ENST00000545784 FMN1Q68DA7 1419 aa16.42■□□□□ 0.22
LINC00939-203ENST00000545784 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
LINC00939-203ENST00000545784 KDM5BQ9UGL1 1544 aa16.37■□□□□ 0.21
LINC00939-203ENST00000545784 NUP153P49790 1475 aaKnown RBP16.36■□□□□ 0.21
LINC00939-203ENST00000545784 RAPGEF6Q8TEU7 1601 aa16.36■□□□□ 0.21
LINC00939-203ENST00000545784 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC00939-203ENST00000545784 CASKIN1Q8WXD9 1431 aa16.34■□□□□ 0.21
LINC00939-203ENST00000545784 ATP10BO94823 1461 aa16.34■□□□□ 0.21
LINC00939-203ENST00000545784 ARID3CA6NKF2 412 aa16.33■□□□□ 0.21
LINC00939-203ENST00000545784 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
LINC00939-203ENST00000545784 VPS8Q8N3P4 1428 aa16.31■□□□□ 0.2
LINC00939-203ENST00000545784 PCF11O94913 1555 aaKnown RBP16.29■□□□□ 0.2
LINC00939-203ENST00000545784 EPRSP07814 1512 aaKnown RBP16.28■□□□□ 0.2
LINC00939-203ENST00000545784 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
LINC00939-203ENST00000545784 ZCCHC11Q5TAX3 1644 aaKnown RBP16.28■□□□□ 0.2
LINC00939-203ENST00000545784 MAPKBP1O60336 1514 aa16.27■□□□□ 0.2
LINC00939-203ENST00000545784 ASXL2Q76L83 1435 aa16.27■□□□□ 0.19
LINC00939-203ENST00000545784 HECW1Q76N89 1606 aa16.26■□□□□ 0.19
LINC00939-203ENST00000545784 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
LINC00939-203ENST00000545784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
LINC00939-203ENST00000545784 HNRNPUL2Q1KMD3 747 aaKnown RBP16.24■□□□□ 0.19
LINC00939-203ENST00000545784 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
LINC00939-203ENST00000545784 PLEKHD1A6NEE1 506 aa16.22■□□□□ 0.19
LINC00939-203ENST00000545784 CCDC18Q5T9S5 1454 aa16.21■□□□□ 0.18
LINC00939-203ENST00000545784 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.18
LINC00939-203ENST00000545784 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
LINC00939-203ENST00000545784 ABCC10Q5T3U5 1492 aa16.19■□□□□ 0.18
LINC00939-203ENST00000545784 KCNH8Q96L42 1107 aa16.18■□□□□ 0.18
LINC00939-203ENST00000545784 CDK11AQ9UQ88 783 aaPredicted RBP16.18■□□□□ 0.18
LINC00939-203ENST00000545784 FAM69CQ0P6D2 419 aa16.17■□□□□ 0.18
LINC00939-203ENST00000545784 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
LINC00939-203ENST00000545784 MAGI3Q5TCQ9 1506 aa16.15■□□□□ 0.18
LINC00939-203ENST00000545784 TROQ12816 1431 aaPredicted RBP16.14■□□□□ 0.17
LINC00939-203ENST00000545784 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
LINC00939-203ENST00000545784 DIP2BQ9P265 1576 aa16.13■□□□□ 0.17
LINC00939-203ENST00000545784 GLI2P10070 1586 aa16.12■□□□□ 0.17
LINC00939-203ENST00000545784 KANK4Q5T7N3 995 aaPredicted RBP16.12■□□□□ 0.17
LINC00939-203ENST00000545784 TIAM1Q13009 1591 aa16.11■□□□□ 0.17
LINC00939-203ENST00000545784 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.17
LINC00939-203ENST00000545784 APLP2Q06481 763 aa16.08■□□□□ 0.16
LINC00939-203ENST00000545784 LRRC9Q6ZRR7 1453 aa16.07■□□□□ 0.16
LINC00939-203ENST00000545784 KIF13AQ9H1H9 1805 aa16.07■□□□□ 0.16
LINC00939-203ENST00000545784 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
LINC00939-203ENST00000545784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC00939-203ENST00000545784 CD109Q6YHK3 1445 aa16.05■□□□□ 0.16
LINC00939-203ENST00000545784 KIF14Q15058 1648 aa16.04■□□□□ 0.16
LINC00939-203ENST00000545784 ABCA9Q8IUA7 1624 aa16.04■□□□□ 0.16
LINC00939-203ENST00000545784 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
LINC00939-203ENST00000545784 EHBP1L1Q8N3D4 1523 aa16.03■□□□□ 0.16
LINC00939-203ENST00000545784 MAP3K4Q9Y6R4 1608 aa16.03■□□□□ 0.16
LINC00939-203ENST00000545784 TTC37Q6PGP7 1564 aa16.01■□□□□ 0.15
LINC00939-203ENST00000545784 PLCH2O75038 1416 aa16■□□□□ 0.15
LINC00939-203ENST00000545784 NCOA2Q15596 1464 aa15.98■□□□□ 0.15
LINC00939-203ENST00000545784 GPATCH8Q9UKJ3 1502 aaKnown RBP15.98■□□□□ 0.15
LINC00939-203ENST00000545784 PPRC1Q5VV67 1664 aaKnown RBP15.97■□□□□ 0.15
LINC00939-203ENST00000545784 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
LINC00939-203ENST00000545784 CCNB3Q8WWL7 1395 aa15.96■□□□□ 0.15
LINC00939-203ENST00000545784 EFCAB2Q5VUJ9 269 aa15.93■□□□□ 0.14
LINC00939-203ENST00000545784 SUPT6HQ7KZ85 1726 aaKnown RBP15.93■□□□□ 0.14
LINC00939-203ENST00000545784 ARAP3Q8WWN8 1544 aa15.93■□□□□ 0.14
LINC00939-203ENST00000545784 TEX14Q8IWB6 1497 aa15.93■□□□□ 0.14
LINC00939-203ENST00000545784 TSPOAP1O95153 1857 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms