RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
CDCA3-210ENST00000545368 KIAA0586Q9BVV6 1533 aa21.19■□□□□ 0.98
CDCA3-210ENST00000545368 IQGAP2Q13576 1575 aa21.18■□□□□ 0.98
CDCA3-210ENST00000545368 UBTFP17480 764 aaKnown RBP21.17■□□□□ 0.98
CDCA3-210ENST00000545368 SHROOM2Q13796 1616 aa21.1■□□□□ 0.97
CDCA3-210ENST00000545368 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
CDCA3-210ENST00000545368 LOC105371045A0A1W2PR82 267 aa21.05■□□□□ 0.96
CDCA3-210ENST00000545368 JPH4Q96JJ6 628 aa21.05■□□□□ 0.96
CDCA3-210ENST00000545368 UGGT2Q9NYU1 1516 aa21.04■□□□□ 0.96
CDCA3-210ENST00000545368 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
CDCA3-210ENST00000545368 CARMIL2Q6F5E8 1435 aa20.98■□□□□ 0.95
CDCA3-210ENST00000545368 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
CDCA3-210ENST00000545368 EFCAB5A4FU69 1503 aa20.97■□□□□ 0.95
CDCA3-210ENST00000545368 KIAA0556O60303 1618 aa20.96■□□□□ 0.95
CDCA3-210ENST00000545368 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
CDCA3-210ENST00000545368 SAMD9Q5K651 1589 aa20.95■□□□□ 0.94
CDCA3-210ENST00000545368 DISP1Q96F81 1524 aa20.94■□□□□ 0.94
CDCA3-210ENST00000545368 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
CDCA3-210ENST00000545368 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
CDCA3-210ENST00000545368 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
CDCA3-210ENST00000545368 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
CDCA3-210ENST00000545368 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
CDCA3-210ENST00000545368 CLIP1P30622 1438 aa20.9■□□□□ 0.94
CDCA3-210ENST00000545368 DNAJC5Q9H3Z4 198 aa20.89■□□□□ 0.93
CDCA3-210ENST00000545368 ARHGAP35Q9NRY4 1499 aa20.87■□□□□ 0.93
CDCA3-210ENST00000545368 P3H3Q8IVL6 736 aa20.84■□□□□ 0.93
CDCA3-210ENST00000545368 FHOD3Q2V2M9 1422 aa20.83■□□□□ 0.93
CDCA3-210ENST00000545368 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
CDCA3-210ENST00000545368 PTPRGP23470 1445 aa20.8■□□□□ 0.92
CDCA3-210ENST00000545368 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
CDCA3-210ENST00000545368 FMN1Q68DA7 1419 aa20.75■□□□□ 0.91
CDCA3-210ENST00000545368 CYB5RLQ6IPT4 315 aa20.7■□□□□ 0.9
CDCA3-210ENST00000545368 RAPGEF6Q8TEU7 1601 aa20.69■□□□□ 0.9
CDCA3-210ENST00000545368 UACAQ9BZF9 1416 aa20.69■□□□□ 0.9
CDCA3-210ENST00000545368 ABCA8O94911 1581 aa20.68■□□□□ 0.9
CDCA3-210ENST00000545368 PLB1Q6P1J6 1458 aa20.68■□□□□ 0.9
CDCA3-210ENST00000545368 ABCC2Q92887 1545 aa20.66■□□□□ 0.9
CDCA3-210ENST00000545368 HECW1Q76N89 1606 aa20.64■□□□□ 0.9
CDCA3-210ENST00000545368 ADCY10Q96PN6 1610 aa20.64■□□□□ 0.9
CDCA3-210ENST00000545368 PCF11O94913 1555 aaKnown RBP20.64■□□□□ 0.9
CDCA3-210ENST00000545368 UHRF1BP1LA0JNW5 1464 aa20.64■□□□□ 0.89
CDCA3-210ENST00000545368 VPS8Q8N3P4 1428 aa20.64■□□□□ 0.89
CDCA3-210ENST00000545368 FYCO1Q9BQS8 1478 aa20.62■□□□□ 0.89
CDCA3-210ENST00000545368 CASKIN1Q8WXD9 1431 aa20.61■□□□□ 0.89
CDCA3-210ENST00000545368 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
CDCA3-210ENST00000545368 NUP153P49790 1475 aaKnown RBP20.56■□□□□ 0.88
CDCA3-210ENST00000545368 ZCCHC11Q5TAX3 1644 aaKnown RBP20.54■□□□□ 0.88
CDCA3-210ENST00000545368 NPM1P06748 294 aaKnown RBP eCLIP20.54■□□□□ 0.88
CDCA3-210ENST00000545368 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
CDCA3-210ENST00000545368 CCDC18Q5T9S5 1454 aa20.52■□□□□ 0.88
CDCA3-210ENST00000545368 LRRIQ1Q96JM4 1722 aa20.51■□□□□ 0.87
CDCA3-210ENST00000545368 EPRSP07814 1512 aaKnown RBP20.51■□□□□ 0.87
CDCA3-210ENST00000545368 ARID3CA6NKF2 412 aa20.5■□□□□ 0.87
CDCA3-210ENST00000545368 ATP10BO94823 1461 aa20.49■□□□□ 0.87
CDCA3-210ENST00000545368 CDK13Q14004 1512 aaKnown RBP20.48■□□□□ 0.87
CDCA3-210ENST00000545368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.48■□□□□ 0.87
CDCA3-210ENST00000545368 HNRNPUL2Q1KMD3 747 aaKnown RBP20.48■□□□□ 0.87
CDCA3-210ENST00000545368 CFAP43Q8NDM7 1665 aa20.45■□□□□ 0.86
CDCA3-210ENST00000545368 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
CDCA3-210ENST00000545368 APLP2Q06481 763 aa20.43■□□□□ 0.86
CDCA3-210ENST00000545368 TIAM1Q13009 1591 aa20.42■□□□□ 0.86
CDCA3-210ENST00000545368 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
CDCA3-210ENST00000545368 MAP3K1Q13233 1512 aa20.4■□□□□ 0.86
CDCA3-210ENST00000545368 ASXL2Q76L83 1435 aa20.4■□□□□ 0.86
CDCA3-210ENST00000545368 WDR7Q9Y4E6 1490 aa20.38■□□□□ 0.85
CDCA3-210ENST00000545368 PLEKHD1A6NEE1 506 aa20.37■□□□□ 0.85
CDCA3-210ENST00000545368 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
CDCA3-210ENST00000545368 EHBP1L1Q8N3D4 1523 aa20.33■□□□□ 0.85
CDCA3-210ENST00000545368 TROQ12816 1431 aaPredicted RBP20.33■□□□□ 0.84
CDCA3-210ENST00000545368 MAGI3Q5TCQ9 1506 aa20.32■□□□□ 0.84
CDCA3-210ENST00000545368 KIF14Q15058 1648 aa20.31■□□□□ 0.84
CDCA3-210ENST00000545368 LRRC9Q6ZRR7 1453 aa20.3■□□□□ 0.84
CDCA3-210ENST00000545368 DIP2BQ9P265 1576 aa20.28■□□□□ 0.84
CDCA3-210ENST00000545368 ABCC10Q5T3U5 1492 aa20.27■□□□□ 0.84
CDCA3-210ENST00000545368 KCNH8Q96L42 1107 aa20.26■□□□□ 0.83
CDCA3-210ENST00000545368 SUPT6HQ7KZ85 1726 aaKnown RBP20.26■□□□□ 0.83
CDCA3-210ENST00000545368 GLI2P10070 1586 aa20.24■□□□□ 0.83
CDCA3-210ENST00000545368 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
CDCA3-210ENST00000545368 KIF13AQ9H1H9 1805 aa20.23■□□□□ 0.83
CDCA3-210ENST00000545368 ABCA9Q8IUA7 1624 aa20.22■□□□□ 0.83
CDCA3-210ENST00000545368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDCA3-210ENST00000545368 FAM69CQ0P6D2 419 aa20.2■□□□□ 0.82
CDCA3-210ENST00000545368 TTC37Q6PGP7 1564 aa20.2■□□□□ 0.82
CDCA3-210ENST00000545368 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
CDCA3-210ENST00000545368 NCOA2Q15596 1464 aa20.18■□□□□ 0.82
CDCA3-210ENST00000545368 MAP3K4Q9Y6R4 1608 aa20.17■□□□□ 0.82
CDCA3-210ENST00000545368 MYO5CQ9NQX4 1742 aa20.17■□□□□ 0.82
CDCA3-210ENST00000545368 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
CDCA3-210ENST00000545368 ITSN2Q9NZM3 1697 aa20.14■□□□□ 0.81
CDCA3-210ENST00000545368 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
CDCA3-210ENST00000545368 CCNB3Q8WWL7 1395 aa20.13■□□□□ 0.81
CDCA3-210ENST00000545368 PPARGC1BQ86YN6 1023 aaKnown RBP20.12■□□□□ 0.81
CDCA3-210ENST00000545368 CDC42BPAQ5VT25 1732 aa20.12■□□□□ 0.81
CDCA3-210ENST00000545368 PREX2Q70Z35 1606 aa20.12■□□□□ 0.81
CDCA3-210ENST00000545368 TSPOAP1O95153 1857 aa20.11■□□□□ 0.81
CDCA3-210ENST00000545368 ARAP3Q8WWN8 1544 aa20.09■□□□□ 0.81
CDCA3-210ENST00000545368 PLCH2O75038 1416 aa20.08■□□□□ 0.8
CDCA3-210ENST00000545368 CFAP74Q9C0B2 1584 aa20.08■□□□□ 0.8
CDCA3-210ENST00000545368 ARHGAP5Q13017 1502 aa20.07■□□□□ 0.8
CDCA3-210ENST00000545368 GPATCH8Q9UKJ3 1502 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms