RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 ZBTB47Q9UFB7 747 aaPredicted RBP9.1□□□□□ -0.95
SMAD5-211ENST00000545279 DCAF8L1A6NGE4 600 aa9.1□□□□□ -0.95
SMAD5-211ENST00000545279 FAM69CQ0P6D2 419 aa9.1□□□□□ -0.95
SMAD5-211ENST00000545279 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
SMAD5-211ENST00000545279 TRIM26Q12899 539 aaPredicted RBP9.09□□□□□ -0.95
SMAD5-211ENST00000545279 PTPRGP23470 1445 aa9.08□□□□□ -0.96
SMAD5-211ENST00000545279 FANCD2Q9BXW9 1451 aa9.08□□□□□ -0.96
SMAD5-211ENST00000545279 EIF4G1Q04637 1599 aaKnown RBP9.06□□□□□ -0.96
SMAD5-211ENST00000545279 RSPH4AQ5TD94 716 aa9.06□□□□□ -0.96
SMAD5-211ENST00000545279 GOLGA3Q08378 1498 aa9.05□□□□□ -0.96
SMAD5-211ENST00000545279 CHIC2Q9UKJ5 165 aa9.04□□□□□ -0.96
SMAD5-211ENST00000545279 FHAD1B1AJZ9 1412 aa9.04□□□□□ -0.96
SMAD5-211ENST00000545279 NEUROD1Q13562 356 aa9.04□□□□□ -0.96
SMAD5-211ENST00000545279 LOC105371045A0A1W2PR82 267 aa9.03□□□□□ -0.96
SMAD5-211ENST00000545279 LMOD2Q6P5Q4 547 aa9.03□□□□□ -0.96
SMAD5-211ENST00000545279 GGT6Q6P531 493 aa9.03□□□□□ -0.96
SMAD5-211ENST00000545279 POGKQ9P215 609 aa9.03□□□□□ -0.96
SMAD5-211ENST00000545279 ZBTB7CA1YPR0 619 aa9.02□□□□□ -0.97
SMAD5-211ENST00000545279 MRC2Q9UBG0 1479 aa9.02□□□□□ -0.97
SMAD5-211ENST00000545279 CDCA8Q53HL2 280 aa9.01□□□□□ -0.97
SMAD5-211ENST00000545279 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
SMAD5-211ENST00000545279 IFT140Q96RY7 1462 aa8.99□□□□□ -0.97
SMAD5-211ENST00000545279 PHF23Q9BUL5 403 aaPredicted RBP8.99□□□□□ -0.97
SMAD5-211ENST00000545279 CNGB1Q14028 1251 aaPredicted RBP8.99□□□□□ -0.97
SMAD5-211ENST00000545279 POGZQ7Z3K3 1410 aa8.98□□□□□ -0.97
SMAD5-211ENST00000545279 DNAJC5BQ9UF47 199 aa8.97□□□□□ -0.97
SMAD5-211ENST00000545279 SPAG9O60271 1321 aaKnown RBP8.97□□□□□ -0.97
SMAD5-211ENST00000545279 TONSLQ96HA7 1378 aa8.96□□□□□ -0.97
SMAD5-211ENST00000545279 FMN1Q68DA7 1419 aa8.96□□□□□ -0.97
SMAD5-211ENST00000545279 MEX3CQ5U5Q3 659 aaKnown RBP8.96□□□□□ -0.98
SMAD5-211ENST00000545279 DMRT2Q9Y5R5 561 aa8.96□□□□□ -0.98
SMAD5-211ENST00000545279 EIF4G2P78344 907 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMAD5-211ENST00000545279 CCDC9Q9Y3X0 531 aaKnown RBP8.94□□□□□ -0.98
SMAD5-211ENST00000545279 CEP162Q5TB80 1403 aa8.94□□□□□ -0.98
SMAD5-211ENST00000545279 WASHC2CQ9Y4E1 1318 aa8.93□□□□□ -0.98
SMAD5-211ENST00000545279 TNIKQ9UKE5 1360 aa8.93□□□□□ -0.98
SMAD5-211ENST00000545279 NPHP1O15259 732 aa8.93□□□□□ -0.98
SMAD5-211ENST00000545279 MROH2BQ7Z745 1585 aa8.92□□□□□ -0.98
SMAD5-211ENST00000545279 CCDC88BA6NC98 1476 aa8.92□□□□□ -0.98
SMAD5-211ENST00000545279 GRIN2BQ13224 1484 aa8.91□□□□□ -0.98
SMAD5-211ENST00000545279 TOP2AP11388 1531 aaKnown RBP8.91□□□□□ -0.98
SMAD5-211ENST00000545279 PLEKHG5O94827 1062 aa8.9□□□□□ -0.98
SMAD5-211ENST00000545279 CANXP27824 592 aaKnown RBP8.9□□□□□ -0.98
SMAD5-211ENST00000545279 SENP3Q9H4L4 574 aaPredicted RBP8.9□□□□□ -0.98
SMAD5-211ENST00000545279 KIF3BO15066 747 aa8.9□□□□□ -0.98
SMAD5-211ENST00000545279 HMGB2P26583 209 aaKnown RBP8.9□□□□□ -0.98
SMAD5-211ENST00000545279 CFAP53Q96M91 514 aa8.89□□□□□ -0.99
SMAD5-211ENST00000545279 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMAD5-211ENST00000545279 RRP7BPQ9NSQ0 103 aa8.88□□□□□ -0.99
SMAD5-211ENST00000545279 RAPGEF2Q9Y4G8 1499 aa8.88□□□□□ -0.99
SMAD5-211ENST00000545279 TMX4Q9H1E5 349 aaPredicted RBP8.88□□□□□ -0.99
SMAD5-211ENST00000545279 GAPVD1Q14C86 1478 aa8.87□□□□□ -0.99
SMAD5-211ENST00000545279 CSB-PGBD3P0DP91 1061 aa8.87□□□□□ -0.99
SMAD5-211ENST00000545279 KDM2AQ9Y2K7 1162 aa8.87□□□□□ -0.99
SMAD5-211ENST00000545279 ANKRD30AQ9BXX3 1397 aa8.87□□□□□ -0.99
SMAD5-211ENST00000545279 DAXXQ9UER7 740 aaPredicted RBP8.86□□□□□ -0.99
SMAD5-211ENST00000545279 TMC1Q8TDI8 760 aa8.86□□□□□ -0.99
SMAD5-211ENST00000545279 SF3B2Q13435 895 aaKnown RBP8.86□□□□□ -0.99
SMAD5-211ENST00000545279 CLSPNQ9HAW4 1339 aa8.85□□□□□ -0.99
SMAD5-211ENST00000545279 ANP32CO43423 234 aa8.84□□□□□ -0.99
SMAD5-211ENST00000545279 HMGXB3Q12766 1538 aa8.84□□□□□ -0.99
SMAD5-211ENST00000545279 CCDC18Q5T9S5 1454 aa8.83□□□□□ -1
SMAD5-211ENST00000545279 RGL3Q3MIN7 710 aa8.83□□□□□ -1
SMAD5-211ENST00000545279 CC2D2AQ9P2K1 1620 aa8.83□□□□□ -1
SMAD5-211ENST00000545279 PRG4Q92954 1404 aaPredicted RBP8.82□□□□□ -1
SMAD5-211ENST00000545279 NUDCQ9Y266 331 aa8.82□□□□□ -1
SMAD5-211ENST00000545279 CHMP4AQ9BY43 222 aa8.82□□□□□ -1
SMAD5-211ENST00000545279 THEMISQ8N1K5 641 aaPredicted RBP8.82□□□□□ -1
SMAD5-211ENST00000545279 AQRO60306 1485 aaKnown RBP eCLIP8.81□□□□□ -1
SMAD5-211ENST00000545279 ATF3P18847 181 aa8.81□□□□□ -1
SMAD5-211ENST00000545279 SMARCA4P51532 1647 aa8.81□□□□□ -1
SMAD5-211ENST00000545279 ERICH6Q7L0X2 663 aa8.81□□□□□ -1
SMAD5-211ENST00000545279 HDGFL2Q7Z4V5 671 aaPredicted RBP8.81□□□□□ -1
SMAD5-211ENST00000545279 ARXQ96QS3 562 aa8.8□□□□□ -1
SMAD5-211ENST00000545279 WDR43Q15061 677 aaKnown RBP eCLIP8.78□□□□□ -1
SMAD5-211ENST00000545279 CFTRP13569 1480 aa8.78□□□□□ -1
SMAD5-211ENST00000545279 PNNQ9H307 717 aaKnown RBP8.78□□□□□ -1
SMAD5-211ENST00000545279 VGFO15240 615 aaPredicted RBP8.78□□□□□ -1
SMAD5-211ENST00000545279 SRPK2P78362 688 aaKnown RBP8.77□□□□□ -1
SMAD5-211ENST00000545279 FGD5Q6ZNL6 1462 aa8.77□□□□□ -1.01
SMAD5-211ENST00000545279 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
SMAD5-211ENST00000545279 NGDNQ8NEJ9 315 aaKnown RBP8.76□□□□□ -1.01
SMAD5-211ENST00000545279 ANKLE2Q86XL3 938 aa8.75□□□□□ -1.01
SMAD5-211ENST00000545279 WASHC2AQ641Q2 1341 aa8.75□□□□□ -1.01
SMAD5-211ENST00000545279 KNSTRNQ9Y448 316 aa8.75□□□□□ -1.01
SMAD5-211ENST00000545279 PROSER2Q86WR7 435 aaPredicted RBP8.74□□□□□ -1.01
SMAD5-211ENST00000545279 SYNJ2O15056 1496 aa8.74□□□□□ -1.01
SMAD5-211ENST00000545279 UACAQ9BZF9 1416 aa8.74□□□□□ -1.01
SMAD5-211ENST00000545279 MAPK8IP3Q9UPT6 1336 aa8.73□□□□□ -1.01
SMAD5-211ENST00000545279 EIF3AQ14152 1382 aaKnown RBP8.73□□□□□ -1.01
SMAD5-211ENST00000545279 ZNF316A6NFI3 1004 aaPredicted RBP8.72□□□□□ -1.01
SMAD5-211ENST00000545279 CARD11Q9BXL7 1154 aa8.72□□□□□ -1.01
SMAD5-211ENST00000545279 HNRNPMP52272 730 aaKnown RBP eCLIP8.72□□□□□ -1.013e-6■■■■■ 28.4
SMAD5-211ENST00000545279 EVA1CP58658 441 aa8.72□□□□□ -1.01
SMAD5-211ENST00000545279 NUP155O75694 1391 aa8.71□□□□□ -1.01
SMAD5-211ENST00000545279 ARHGAP35Q9NRY4 1499 aa8.71□□□□□ -1.02
SMAD5-211ENST00000545279 LAMC3Q9Y6N6 1575 aa8.71□□□□□ -1.02
SMAD5-211ENST00000545279 DNAJC5Q9H3Z4 198 aa8.71□□□□□ -1.02
SMAD5-211ENST00000545279 RAD54L2Q9Y4B4 1467 aa8.71□□□□□ -1.02
SMAD5-211ENST00000545279 TERF2IPQ9NYB0 399 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms