RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 NUP160Q12769 1436 aa11.31□□□□□ -0.6
HMGCS2-204ENST00000544913 CHD1O14646 1710 aa11.29□□□□□ -0.6
HMGCS2-204ENST00000544913 CLIP1P30622 1438 aa11.27□□□□□ -0.61
HMGCS2-204ENST00000544913 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
HMGCS2-204ENST00000544913 KIAA0586Q9BVV6 1533 aa11.25□□□□□ -0.61
HMGCS2-204ENST00000544913 ARAP1Q96P48 1450 aa11.25□□□□□ -0.61
HMGCS2-204ENST00000544913 IQGAP2Q13576 1575 aa11.25□□□□□ -0.61
HMGCS2-204ENST00000544913 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
HMGCS2-204ENST00000544913 SAMD9Q5K651 1589 aa11.24□□□□□ -0.61
HMGCS2-204ENST00000544913 UGGT2Q9NYU1 1516 aa11.22□□□□□ -0.61
HMGCS2-204ENST00000544913 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
HMGCS2-204ENST00000544913 EFCAB5A4FU69 1503 aa11.2□□□□□ -0.62
HMGCS2-204ENST00000544913 FBLN2P98095 1184 aa11.2□□□□□ -0.62
HMGCS2-204ENST00000544913 DISP1Q96F81 1524 aa11.2□□□□□ -0.62
HMGCS2-204ENST00000544913 SHROOM2Q13796 1616 aa11.18□□□□□ -0.62
HMGCS2-204ENST00000544913 RANGAP1P46060 587 aaPredicted RBP11.17□□□□□ -0.62
HMGCS2-204ENST00000544913 VPS8Q8N3P4 1428 aa11.17□□□□□ -0.62
HMGCS2-204ENST00000544913 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
HMGCS2-204ENST00000544913 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
HMGCS2-204ENST00000544913 JPH4Q96JJ6 628 aa11.12□□□□□ -0.63
HMGCS2-204ENST00000544913 ERCC6L2Q5T890 1561 aa11.12□□□□□ -0.63
HMGCS2-204ENST00000544913 PCF11O94913 1555 aaKnown RBP11.1□□□□□ -0.63
HMGCS2-204ENST00000544913 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
HMGCS2-204ENST00000544913 PRG4Q92954 1404 aaPredicted RBP11.09□□□□□ -0.63
HMGCS2-204ENST00000544913 FMN1Q68DA7 1419 aa11.06□□□□□ -0.64
HMGCS2-204ENST00000544913 CASKIN1Q8WXD9 1431 aa11.06□□□□□ -0.64
HMGCS2-204ENST00000544913 FYCO1Q9BQS8 1478 aa11.06□□□□□ -0.64
HMGCS2-204ENST00000544913 LRRIQ1Q96JM4 1722 aa11.05□□□□□ -0.64
HMGCS2-204ENST00000544913 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
HMGCS2-204ENST00000544913 CARMIL2Q6F5E8 1435 aa11.05□□□□□ -0.64
HMGCS2-204ENST00000544913 ABCA8O94911 1581 aa11.02□□□□□ -0.64
HMGCS2-204ENST00000544913 PLB1Q6P1J6 1458 aa11.02□□□□□ -0.65
HMGCS2-204ENST00000544913 MAP3K1Q13233 1512 aa11.02□□□□□ -0.65
HMGCS2-204ENST00000544913 NUP153P49790 1475 aaKnown RBP11.02□□□□□ -0.65
HMGCS2-204ENST00000544913 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
HMGCS2-204ENST00000544913 TIAM1Q13009 1591 aa11.01□□□□□ -0.65
HMGCS2-204ENST00000544913 RAPGEF6Q8TEU7 1601 aa11□□□□□ -0.65
HMGCS2-204ENST00000544913 SENP3Q9H4L4 574 aaPredicted RBP10.99□□□□□ -0.65
HMGCS2-204ENST00000544913 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
HMGCS2-204ENST00000544913 PTPRGP23470 1445 aa10.98□□□□□ -0.65
HMGCS2-204ENST00000544913 EPRSP07814 1512 aaKnown RBP10.98□□□□□ -0.65
HMGCS2-204ENST00000544913 MAGI3Q5TCQ9 1506 aa10.98□□□□□ -0.65
HMGCS2-204ENST00000544913 KANK4Q5T7N3 995 aaPredicted RBP10.97□□□□□ -0.65
HMGCS2-204ENST00000544913 CDK13Q14004 1512 aaKnown RBP10.97□□□□□ -0.65
HMGCS2-204ENST00000544913 PPARGC1BQ86YN6 1023 aaKnown RBP10.96□□□□□ -0.65
HMGCS2-204ENST00000544913 ARHGEF11O15085 1522 aa10.96□□□□□ -0.66
HMGCS2-204ENST00000544913 LRRC9Q6ZRR7 1453 aa10.95□□□□□ -0.66
HMGCS2-204ENST00000544913 UACAQ9BZF9 1416 aa10.94□□□□□ -0.66
HMGCS2-204ENST00000544913 ABCC2Q92887 1545 aa10.94□□□□□ -0.66
HMGCS2-204ENST00000544913 UHRF1BP1LA0JNW5 1464 aa10.94□□□□□ -0.66
HMGCS2-204ENST00000544913 CCDC18Q5T9S5 1454 aa10.94□□□□□ -0.66
HMGCS2-204ENST00000544913 TTBK1Q5TCY1 1321 aaPredicted RBP10.92□□□□□ -0.66
HMGCS2-204ENST00000544913 ADCY10Q96PN6 1610 aa10.92□□□□□ -0.66
HMGCS2-204ENST00000544913 POTEDQ86YR6 584 aa10.92□□□□□ -0.66
HMGCS2-204ENST00000544913 ATP10BO94823 1461 aa10.92□□□□□ -0.66
HMGCS2-204ENST00000544913 RIMBP3CA6NJZ7 1639 aa10.91□□□□□ -0.66
HMGCS2-204ENST00000544913 RIMBP3BA6NNM3 1639 aa10.91□□□□□ -0.66
HMGCS2-204ENST00000544913 RIMBP3Q9UFD9 1639 aa10.91□□□□□ -0.66
HMGCS2-204ENST00000544913 KDM5BQ9UGL1 1544 aa10.89□□□□□ -0.67
HMGCS2-204ENST00000544913 EHBP1L1Q8N3D4 1523 aa10.89□□□□□ -0.67
HMGCS2-204ENST00000544913 ARID3CA6NKF2 412 aa10.88□□□□□ -0.67
HMGCS2-204ENST00000544913 ATP1B4Q9UN42 357 aaPredicted RBP10.88□□□□□ -0.67
HMGCS2-204ENST00000544913 PHF23Q9BUL5 403 aaPredicted RBP10.87□□□□□ -0.67
HMGCS2-204ENST00000544913 PHLDB1Q86UU1 1377 aa10.86□□□□□ -0.67
HMGCS2-204ENST00000544913 ZCCHC11Q5TAX3 1644 aaKnown RBP10.86□□□□□ -0.67
HMGCS2-204ENST00000544913 APLP2Q06481 763 aa10.86□□□□□ -0.67
HMGCS2-204ENST00000544913 TROQ12816 1431 aaPredicted RBP10.85□□□□□ -0.67
HMGCS2-204ENST00000544913 NCOA2Q15596 1464 aa10.84□□□□□ -0.67
HMGCS2-204ENST00000544913 KIF14Q15058 1648 aa10.84□□□□□ -0.67
HMGCS2-204ENST00000544913 MTUS2Q5JR59 1369 aa10.84□□□□□ -0.67
HMGCS2-204ENST00000544913 TRIM26Q12899 539 aaPredicted RBP10.83□□□□□ -0.68
HMGCS2-204ENST00000544913 RRBP1Q9P2E9 1410 aaKnown RBP10.83□□□□□ -0.68
HMGCS2-204ENST00000544913 SUPT6HQ7KZ85 1726 aaKnown RBP10.82□□□□□ -0.68
HMGCS2-204ENST00000544913 PCGF6Q9BYE7 350 aa10.82□□□□□ -0.68
HMGCS2-204ENST00000544913 ABCC10Q5T3U5 1492 aa10.82□□□□□ -0.68
HMGCS2-204ENST00000544913 HRCP23327 699 aa10.8□□□□□ -0.68
HMGCS2-204ENST00000544913 MYOM3Q5VTT5 1437 aa10.79□□□□□ -0.68
HMGCS2-204ENST00000544913 TTC37Q6PGP7 1564 aa10.77□□□□□ -0.69
HMGCS2-204ENST00000544913 WDR7Q9Y4E6 1490 aa10.77□□□□□ -0.69
HMGCS2-204ENST00000544913 FGD6Q6ZV73 1430 aa10.77□□□□□ -0.69
HMGCS2-204ENST00000544913 ASXL2Q76L83 1435 aa10.76□□□□□ -0.69
HMGCS2-204ENST00000544913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.76□□□□□ -0.69
HMGCS2-204ENST00000544913 GPATCH8Q9UKJ3 1502 aaKnown RBP10.76□□□□□ -0.69
HMGCS2-204ENST00000544913 CYB5RLQ6IPT4 315 aa10.76□□□□□ -0.69
HMGCS2-204ENST00000544913 CDK11AQ9UQ88 783 aaPredicted RBP10.76□□□□□ -0.69
HMGCS2-204ENST00000544913 CCNB3Q8WWL7 1395 aa10.75□□□□□ -0.69
HMGCS2-204ENST00000544913 PLEKHD1A6NEE1 506 aa10.75□□□□□ -0.69
HMGCS2-204ENST00000544913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.75□□□□□ -0.69
HMGCS2-204ENST00000544913 HNRNPUL2Q1KMD3 747 aaKnown RBP10.75□□□□□ -0.69
HMGCS2-204ENST00000544913 MAPKBP1O60336 1514 aa10.75□□□□□ -0.69
HMGCS2-204ENST00000544913 TCOF1Q13428 1488 aaKnown RBP10.75□□□□□ -0.69
HMGCS2-204ENST00000544913 CDC42BPAQ5VT25 1732 aa10.75□□□□□ -0.69
HMGCS2-204ENST00000544913 MIA2Q96PC5 1412 aa10.73□□□□□ -0.69
HMGCS2-204ENST00000544913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.72□□□□□ -0.69
HMGCS2-204ENST00000544913 PTPN23Q9H3S7 1636 aa10.72□□□□□ -0.69
HMGCS2-204ENST00000544913 PREX2Q70Z35 1606 aa10.72□□□□□ -0.69
HMGCS2-204ENST00000544913 ABCA9Q8IUA7 1624 aa10.72□□□□□ -0.69
HMGCS2-204ENST00000544913 CDC42BPBQ9Y5S2 1711 aa10.71□□□□□ -0.69
HMGCS2-204ENST00000544913 ITSN2Q9NZM3 1697 aa10.7□□□□□ -0.7
HMGCS2-204ENST00000544913 PTPRKQ15262 1439 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms