RNA–Protein interactions for RNA: ENST00000544882.1

SCNN1A-222, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-222ENST00000544882 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
SCNN1A-222ENST00000544882 PRG4Q92954 1404 aaPredicted RBP27.96■■■□□ 2.07
SCNN1A-222ENST00000544882 CARMIL1Q5VZK9 1371 aa27.92■■■□□ 2.06
SCNN1A-222ENST00000544882 KIAA0586Q9BVV6 1533 aa27.88■■■□□ 2.05
SCNN1A-222ENST00000544882 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.02
SCNN1A-222ENST00000544882 IQGAP2Q13576 1575 aa27.66■■■□□ 2.02
SCNN1A-222ENST00000544882 CARMIL2Q6F5E8 1435 aa27.6■■■□□ 2.01
SCNN1A-222ENST00000544882 NPM1P06748 294 aaKnown RBP eCLIP27.59■■■□□ 2.01
SCNN1A-222ENST00000544882 ADCY10Q96PN6 1610 aa27.59■■■□□ 2.01
SCNN1A-222ENST00000544882 PTPRGP23470 1445 aa27.58■■■□□ 2
SCNN1A-222ENST00000544882 TTBK1Q5TCY1 1321 aaPredicted RBP27.56■■■□□ 2
SCNN1A-222ENST00000544882 TNIKQ9UKE5 1360 aa27.55■■■□□ 2
SCNN1A-222ENST00000544882 PRXQ9BXM0 1461 aa27.55■■■□□ 2
SCNN1A-222ENST00000544882 CHIC1Q5VXU3 224 aa27.53■■■□□ 2
SCNN1A-222ENST00000544882 DISP1Q96F81 1524 aa27.51■■□□□ 1.99
SCNN1A-222ENST00000544882 KIF13AQ9H1H9 1805 aa27.51■■□□□ 1.99
SCNN1A-222ENST00000544882 UGGT2Q9NYU1 1516 aa27.5■■□□□ 1.99
SCNN1A-222ENST00000544882 MAPKBP1O60336 1514 aa27.48■■□□□ 1.99
SCNN1A-222ENST00000544882 CTTNBP2Q8WZ74 1663 aa27.46■■□□□ 1.99
SCNN1A-222ENST00000544882 CSRNP3Q8WYN3 585 aa27.43■■□□□ 1.98
SCNN1A-222ENST00000544882 ABCC10Q5T3U5 1492 aa27.43■■□□□ 1.98
SCNN1A-222ENST00000544882 FAM69CQ0P6D2 419 aa27.42■■□□□ 1.98
SCNN1A-222ENST00000544882 KIAA0556O60303 1618 aa27.41■■□□□ 1.98
SCNN1A-222ENST00000544882 EEA1Q15075 1411 aa27.38■■□□□ 1.97
SCNN1A-222ENST00000544882 ABCC2Q92887 1545 aa27.37■■□□□ 1.97
SCNN1A-222ENST00000544882 FAM9AQ8IZU1 332 aaPredicted RBP27.37■■□□□ 1.97
SCNN1A-222ENST00000544882 UACAQ9BZF9 1416 aa27.37■■□□□ 1.97
SCNN1A-222ENST00000544882 DIP2BQ9P265 1576 aa27.36■■□□□ 1.97
SCNN1A-222ENST00000544882 UHRF1BP1LA0JNW5 1464 aa27.36■■□□□ 1.97
SCNN1A-222ENST00000544882 GOLGA3Q08378 1498 aa27.31■■□□□ 1.96
SCNN1A-222ENST00000544882 ASXL2Q76L83 1435 aa27.25■■□□□ 1.95
SCNN1A-222ENST00000544882 PLB1Q6P1J6 1458 aa27.24■■□□□ 1.95
SCNN1A-222ENST00000544882 KDM5BQ9UGL1 1544 aa27.23■■□□□ 1.95
SCNN1A-222ENST00000544882 KIF21BO75037 1637 aa27.22■■□□□ 1.95
SCNN1A-222ENST00000544882 TSPOAP1O95153 1857 aa27.21■■□□□ 1.95
SCNN1A-222ENST00000544882 ZCCHC11Q5TAX3 1644 aaKnown RBP27.18■■□□□ 1.94
SCNN1A-222ENST00000544882 P3H3Q8IVL6 736 aa27.14■■□□□ 1.94
SCNN1A-222ENST00000544882 ABCA8O94911 1581 aa27.14■■□□□ 1.93
SCNN1A-222ENST00000544882 GLI2P10070 1586 aa27.13■■□□□ 1.93
SCNN1A-222ENST00000544882 SAMD9Q5K651 1589 aa27.09■■□□□ 1.93
SCNN1A-222ENST00000544882 EPRSP07814 1512 aaKnown RBP27.09■■□□□ 1.93
SCNN1A-222ENST00000544882 EHMT2Q96KQ7 1210 aa27.06■■□□□ 1.92
SCNN1A-222ENST00000544882 KDM6BO15054 1643 aa27.05■■□□□ 1.92
SCNN1A-222ENST00000544882 WDR7Q9Y4E6 1490 aa27.04■■□□□ 1.92
SCNN1A-222ENST00000544882 RANGAP1P46060 587 aaPredicted RBP27.03■■□□□ 1.92
SCNN1A-222ENST00000544882 PPRC1Q5VV67 1664 aaKnown RBP27.02■■□□□ 1.92
SCNN1A-222ENST00000544882 MAP3K4Q9Y6R4 1608 aa26.99■■□□□ 1.91
SCNN1A-222ENST00000544882 ARID3CA6NKF2 412 aa26.96■■□□□ 1.91
SCNN1A-222ENST00000544882 AEBP2Q6ZN18 517 aaPredicted RBP26.96■■□□□ 1.91
SCNN1A-222ENST00000544882 KCNH8Q96L42 1107 aa26.94■■□□□ 1.9
SCNN1A-222ENST00000544882 ATP10BO94823 1461 aa26.93■■□□□ 1.9
SCNN1A-222ENST00000544882 FHOD3Q2V2M9 1422 aa26.92■■□□□ 1.9
SCNN1A-222ENST00000544882 RAPGEF6Q8TEU7 1601 aa26.91■■□□□ 1.9
SCNN1A-222ENST00000544882 UBTFP17480 764 aaKnown RBP26.91■■□□□ 1.9
SCNN1A-222ENST00000544882 TEX14Q8IWB6 1497 aa26.9■■□□□ 1.9
SCNN1A-222ENST00000544882 EFCAB5A4FU69 1503 aa26.87■■□□□ 1.89
SCNN1A-222ENST00000544882 CFAP43Q8NDM7 1665 aa26.85■■□□□ 1.89
SCNN1A-222ENST00000544882 CD109Q6YHK3 1445 aa26.84■■□□□ 1.89
SCNN1A-222ENST00000544882 COL17A1Q9UMD9 1497 aaPredicted RBP26.82■■□□□ 1.88
SCNN1A-222ENST00000544882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.81■■□□□ 1.88
SCNN1A-222ENST00000544882 HNRNPUL2Q1KMD3 747 aaKnown RBP26.81■■□□□ 1.88
SCNN1A-222ENST00000544882 NUP153P49790 1475 aaKnown RBP26.81■■□□□ 1.88
SCNN1A-222ENST00000544882 MAGI3Q5TCQ9 1506 aa26.8■■□□□ 1.88
SCNN1A-222ENST00000544882 ARHGAP35Q9NRY4 1499 aa26.79■■□□□ 1.88
SCNN1A-222ENST00000544882 ABCA9Q8IUA7 1624 aa26.7■■□□□ 1.86
SCNN1A-222ENST00000544882 PLEKHD1A6NEE1 506 aa26.67■■□□□ 1.86
SCNN1A-222ENST00000544882 KDM4FA0A1W2PPD8 638 aa26.65■■□□□ 1.86
SCNN1A-222ENST00000544882 FMN1Q68DA7 1419 aa26.63■■□□□ 1.85
SCNN1A-222ENST00000544882 CDK13Q14004 1512 aaKnown RBP26.6■■□□□ 1.85
SCNN1A-222ENST00000544882 ATP1B4Q9UN42 357 aaPredicted RBP26.59■■□□□ 1.85
SCNN1A-222ENST00000544882 ARAP3Q8WWN8 1544 aa26.58■■□□□ 1.85
SCNN1A-222ENST00000544882 PHLDB1Q86UU1 1377 aa26.57■■□□□ 1.84
SCNN1A-222ENST00000544882 LRRIQ1Q96JM4 1722 aa26.56■■□□□ 1.84
SCNN1A-222ENST00000544882 HECW1Q76N89 1606 aa26.56■■□□□ 1.84
SCNN1A-222ENST00000544882 NEO1Q92859 1461 aa26.54■■□□□ 1.84
SCNN1A-222ENST00000544882 CLIP1P30622 1438 aa26.52■■□□□ 1.84
SCNN1A-222ENST00000544882 ADGRL1O94910 1474 aa26.51■■□□□ 1.83
SCNN1A-222ENST00000544882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.5■■□□□ 1.83
SCNN1A-222ENST00000544882 PCF11O94913 1555 aaKnown RBP26.5■■□□□ 1.83
SCNN1A-222ENST00000544882 TTC37Q6PGP7 1564 aa26.47■■□□□ 1.83
SCNN1A-222ENST00000544882 RAPGEF3O95398 923 aa26.46■■□□□ 1.83
SCNN1A-222ENST00000544882 LOC105371045A0A1W2PR82 267 aa26.45■■□□□ 1.82
SCNN1A-222ENST00000544882 CDK11AQ9UQ88 783 aaPredicted RBP26.45■■□□□ 1.82
SCNN1A-222ENST00000544882 CASKIN1Q8WXD9 1431 aa26.41■■□□□ 1.82
SCNN1A-222ENST00000544882 FANCAO15360 1455 aa26.41■■□□□ 1.82
SCNN1A-222ENST00000544882 AKNAQ7Z591 1439 aa26.4■■□□□ 1.82
SCNN1A-222ENST00000544882 CFAP74Q9C0B2 1584 aa26.4■■□□□ 1.82
SCNN1A-222ENST00000544882 CEP162Q5TB80 1403 aa26.39■■□□□ 1.82
SCNN1A-222ENST00000544882 FRMPD1Q5SYB0 1578 aa26.38■■□□□ 1.81
SCNN1A-222ENST00000544882 TROQ12816 1431 aaPredicted RBP26.36■■□□□ 1.81
SCNN1A-222ENST00000544882 DENND4BO75064 1496 aaPredicted RBP26.36■■□□□ 1.81
SCNN1A-222ENST00000544882 PLCH2O75038 1416 aa26.35■■□□□ 1.81
SCNN1A-222ENST00000544882 KIF14Q15058 1648 aa26.35■■□□□ 1.81
SCNN1A-222ENST00000544882 FYCO1Q9BQS8 1478 aa26.34■■□□□ 1.81
SCNN1A-222ENST00000544882 RICTORQ6R327 1708 aa26.31■■□□□ 1.8
SCNN1A-222ENST00000544882 CCDC18Q5T9S5 1454 aa26.31■■□□□ 1.8
SCNN1A-222ENST00000544882 MYO5CQ9NQX4 1742 aa26.31■■□□□ 1.8
SCNN1A-222ENST00000544882 EFCAB2Q5VUJ9 269 aa26.27■■□□□ 1.8
SCNN1A-222ENST00000544882 SCAPERQ9BY12 1400 aa26.24■■□□□ 1.79
SCNN1A-222ENST00000544882 ARHGEF40Q8TER5 1519 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms