RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 PRXQ9BXM0 1461 aa28.24■■■□□ 2.11
PDCD2-213ENST00000544866 KIAA0586Q9BVV6 1533 aa28.22■■■□□ 2.11
PDCD2-213ENST00000544866 ARAP1Q96P48 1450 aa28.19■■■□□ 2.1
PDCD2-213ENST00000544866 ERCC6L2Q5T890 1561 aa28.18■■■□□ 2.1
PDCD2-213ENST00000544866 CSRNP3Q8WYN3 585 aa28.17■■■□□ 2.1
PDCD2-213ENST00000544866 JPH4Q96JJ6 628 aa28.11■■■□□ 2.09
PDCD2-213ENST00000544866 IQGAP2Q13576 1575 aa28.11■■■□□ 2.09
PDCD2-213ENST00000544866 CTTNBP2Q8WZ74 1663 aa28.1■■■□□ 2.09
PDCD2-213ENST00000544866 FAM9AQ8IZU1 332 aaPredicted RBP28.09■■■□□ 2.09
PDCD2-213ENST00000544866 PRG4Q92954 1404 aaPredicted RBP28.09■■■□□ 2.09
PDCD2-213ENST00000544866 CYB5RLQ6IPT4 315 aa28.05■■■□□ 2.08
PDCD2-213ENST00000544866 KIF21BO75037 1637 aa28.03■■■□□ 2.08
PDCD2-213ENST00000544866 UGGT2Q9NYU1 1516 aa27.96■■■□□ 2.07
PDCD2-213ENST00000544866 DISP1Q96F81 1524 aa27.91■■■□□ 2.06
PDCD2-213ENST00000544866 CARMIL2Q6F5E8 1435 aa27.86■■■□□ 2.05
PDCD2-213ENST00000544866 KIAA0556O60303 1618 aa27.85■■■□□ 2.05
PDCD2-213ENST00000544866 GOLGA3Q08378 1498 aa27.82■■■□□ 2.04
PDCD2-213ENST00000544866 TNIKQ9UKE5 1360 aa27.78■■■□□ 2.04
PDCD2-213ENST00000544866 PTPRGP23470 1445 aa27.75■■■□□ 2.03
PDCD2-213ENST00000544866 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
PDCD2-213ENST00000544866 ADCY10Q96PN6 1610 aa27.72■■■□□ 2.03
PDCD2-213ENST00000544866 EHMT2Q96KQ7 1210 aa27.7■■■□□ 2.02
PDCD2-213ENST00000544866 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
PDCD2-213ENST00000544866 UBTFP17480 764 aaKnown RBP27.65■■■□□ 2.02
PDCD2-213ENST00000544866 UHRF1BP1LA0JNW5 1464 aa27.59■■■□□ 2.01
PDCD2-213ENST00000544866 UACAQ9BZF9 1416 aa27.58■■■□□ 2.01
PDCD2-213ENST00000544866 EFCAB5A4FU69 1503 aa27.58■■■□□ 2.01
PDCD2-213ENST00000544866 ABCC2Q92887 1545 aa27.58■■■□□ 2.01
PDCD2-213ENST00000544866 P3H3Q8IVL6 736 aa27.56■■■□□ 2
PDCD2-213ENST00000544866 RANGAP1P46060 587 aaPredicted RBP27.55■■■□□ 2
PDCD2-213ENST00000544866 ABCA8O94911 1581 aa27.54■■■□□ 2
PDCD2-213ENST00000544866 PLB1Q6P1J6 1458 aa27.53■■■□□ 2
PDCD2-213ENST00000544866 FHOD3Q2V2M9 1422 aa27.51■■□□□ 1.99
PDCD2-213ENST00000544866 MAPKBP1O60336 1514 aa27.5■■□□□ 1.99
PDCD2-213ENST00000544866 ARHGAP35Q9NRY4 1499 aa27.47■■□□□ 1.99
PDCD2-213ENST00000544866 KDM5BQ9UGL1 1544 aa27.46■■□□□ 1.99
PDCD2-213ENST00000544866 NPM1P06748 294 aaKnown RBP eCLIP27.46■■□□□ 1.99
PDCD2-213ENST00000544866 ZCCHC11Q5TAX3 1644 aaKnown RBP27.44■■□□□ 1.98
PDCD2-213ENST00000544866 RAPGEF6Q8TEU7 1601 aa27.41■■□□□ 1.98
PDCD2-213ENST00000544866 KIF13AQ9H1H9 1805 aa27.41■■□□□ 1.98
PDCD2-213ENST00000544866 TRHP20396 242 aaPredicted RBP27.4■■□□□ 1.98
PDCD2-213ENST00000544866 ABCC10Q5T3U5 1492 aa27.33■■□□□ 1.97
PDCD2-213ENST00000544866 DIP2BQ9P265 1576 aa27.33■■□□□ 1.97
PDCD2-213ENST00000544866 ASXL2Q76L83 1435 aa27.33■■□□□ 1.96
PDCD2-213ENST00000544866 CLIP1P30622 1438 aa27.31■■□□□ 1.96
PDCD2-213ENST00000544866 NUP153P49790 1475 aaKnown RBP27.31■■□□□ 1.96
PDCD2-213ENST00000544866 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
PDCD2-213ENST00000544866 ATP10BO94823 1461 aa27.28■■□□□ 1.96
PDCD2-213ENST00000544866 FMN1Q68DA7 1419 aa27.28■■□□□ 1.96
PDCD2-213ENST00000544866 CEP162Q5TB80 1403 aa27.23■■□□□ 1.95
PDCD2-213ENST00000544866 WDR7Q9Y4E6 1490 aa27.22■■□□□ 1.95
PDCD2-213ENST00000544866 ARID3CA6NKF2 412 aa27.22■■□□□ 1.95
PDCD2-213ENST00000544866 GLI2P10070 1586 aa27.2■■□□□ 1.94
PDCD2-213ENST00000544866 FAM69CQ0P6D2 419 aa27.2■■□□□ 1.94
PDCD2-213ENST00000544866 EPRSP07814 1512 aaKnown RBP27.19■■□□□ 1.94
PDCD2-213ENST00000544866 HECW1Q76N89 1606 aa27.19■■□□□ 1.94
PDCD2-213ENST00000544866 PCF11O94913 1555 aaKnown RBP27.16■■□□□ 1.94
PDCD2-213ENST00000544866 LRRIQ1Q96JM4 1722 aa27.16■■□□□ 1.94
PDCD2-213ENST00000544866 CDK13Q14004 1512 aaKnown RBP27.12■■□□□ 1.93
PDCD2-213ENST00000544866 TSPOAP1O95153 1857 aa27.12■■□□□ 1.93
PDCD2-213ENST00000544866 CASKIN1Q8WXD9 1431 aa27.11■■□□□ 1.93
PDCD2-213ENST00000544866 MAP3K4Q9Y6R4 1608 aa27.1■■□□□ 1.93
PDCD2-213ENST00000544866 PPRC1Q5VV67 1664 aaKnown RBP27.08■■□□□ 1.92
PDCD2-213ENST00000544866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.07■■□□□ 1.92
PDCD2-213ENST00000544866 HNRNPUL2Q1KMD3 747 aaKnown RBP27.07■■□□□ 1.92
PDCD2-213ENST00000544866 FYCO1Q9BQS8 1478 aa27.06■■□□□ 1.92
PDCD2-213ENST00000544866 CFAP43Q8NDM7 1665 aa27.05■■□□□ 1.92
PDCD2-213ENST00000544866 ATP1B4Q9UN42 357 aaPredicted RBP27.04■■□□□ 1.92
PDCD2-213ENST00000544866 KCNH8Q96L42 1107 aa27.03■■□□□ 1.92
PDCD2-213ENST00000544866 ABCA9Q8IUA7 1624 aa26.99■■□□□ 1.91
PDCD2-213ENST00000544866 CCDC18Q5T9S5 1454 aa26.99■■□□□ 1.91
PDCD2-213ENST00000544866 PLEKHD1A6NEE1 506 aa26.96■■□□□ 1.91
PDCD2-213ENST00000544866 CD109Q6YHK3 1445 aa26.93■■□□□ 1.9
PDCD2-213ENST00000544866 MAGI3Q5TCQ9 1506 aa26.9■■□□□ 1.9
PDCD2-213ENST00000544866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.89■■□□□ 1.895e-36■■■□□ 15.9
PDCD2-213ENST00000544866 VPS8Q8N3P4 1428 aa26.89■■□□□ 1.89
PDCD2-213ENST00000544866 TTC37Q6PGP7 1564 aa26.88■■□□□ 1.89
PDCD2-213ENST00000544866 TEX14Q8IWB6 1497 aa26.88■■□□□ 1.89
PDCD2-213ENST00000544866 TROQ12816 1431 aaPredicted RBP26.88■■□□□ 1.89
PDCD2-213ENST00000544866 CDK11AQ9UQ88 783 aaPredicted RBP26.87■■□□□ 1.89
PDCD2-213ENST00000544866 KIF14Q15058 1648 aa26.87■■□□□ 1.89
PDCD2-213ENST00000544866 KDM6BO15054 1643 aa26.83■■□□□ 1.89
PDCD2-213ENST00000544866 MYO5CQ9NQX4 1742 aa26.76■■□□□ 1.88
PDCD2-213ENST00000544866 TIAM1Q13009 1591 aa26.75■■□□□ 1.87
PDCD2-213ENST00000544866 COL17A1Q9UMD9 1497 aaPredicted RBP26.74■■□□□ 1.87
PDCD2-213ENST00000544866 NEO1Q92859 1461 aa26.72■■□□□ 1.87
PDCD2-213ENST00000544866 EHBP1L1Q8N3D4 1523 aa26.7■■□□□ 1.86
PDCD2-213ENST00000544866 ARAP3Q8WWN8 1544 aa26.7■■□□□ 1.86
PDCD2-213ENST00000544866 PLCH2O75038 1416 aa26.69■■□□□ 1.86
PDCD2-213ENST00000544866 CFAP74Q9C0B2 1584 aa26.69■■□□□ 1.86
PDCD2-213ENST00000544866 MTUS2Q5JR59 1369 aa26.67■■□□□ 1.86
PDCD2-213ENST00000544866 CDC42BPAQ5VT25 1732 aa26.67■■□□□ 1.86
PDCD2-213ENST00000544866 CDC42BPBQ9Y5S2 1711 aa26.67■■□□□ 1.86
PDCD2-213ENST00000544866 FANCAO15360 1455 aa26.67■■□□□ 1.86
PDCD2-213ENST00000544866 MAP3K1Q13233 1512 aa26.66■■□□□ 1.86
PDCD2-213ENST00000544866 PREX2Q70Z35 1606 aa26.66■■□□□ 1.86
PDCD2-213ENST00000544866 PHLDB1Q86UU1 1377 aa26.66■■□□□ 1.86
PDCD2-213ENST00000544866 AKNAQ7Z591 1439 aa26.61■■□□□ 1.85
PDCD2-213ENST00000544866 LRRC9Q6ZRR7 1453 aa26.59■■□□□ 1.85
PDCD2-213ENST00000544866 ARHGAP5Q13017 1502 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms