RNA–Protein interactions for RNA: ENST00000544760.1

KDM5A-210, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-210ENST00000544760 VPS8Q8N3P4 1428 aa27.63■■■□□ 2.01
KDM5A-210ENST00000544760 TRIM52Q96A61 297 aa27.62■■■□□ 2.01
KDM5A-210ENST00000544760 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.57■■■□□ 2
KDM5A-210ENST00000544760 CLIP1P30622 1438 aa27.57■■■□□ 2
KDM5A-210ENST00000544760 RTL5Q5HYW3 569 aaPredicted RBP27.55■■■□□ 2
KDM5A-210ENST00000544760 PAK3O75914 559 aaPredicted RBP27.52■■■□□ 2
KDM5A-210ENST00000544760 CUX2O14529 1486 aa27.52■■■□□ 2
KDM5A-210ENST00000544760 PPP1R15AO75807 674 aaPredicted RBP27.51■■□□□ 1.99
KDM5A-210ENST00000544760 DDX10Q13206 875 aaKnown RBP27.51■■□□□ 1.99
KDM5A-210ENST00000544760 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
KDM5A-210ENST00000544760 PPP4R2Q9NY27 417 aa27.5■■□□□ 1.99
KDM5A-210ENST00000544760 RTN4Q9NQC3 1192 aaKnown RBP27.46■■□□□ 1.99
KDM5A-210ENST00000544760 PDS5BQ9NTI5 1447 aa27.45■■□□□ 1.99
KDM5A-210ENST00000544760 RUSC2Q8N2Y8 1516 aa27.45■■□□□ 1.98
KDM5A-210ENST00000544760 KIF21BO75037 1637 aa27.43■■□□□ 1.98
KDM5A-210ENST00000544760 ANP32CO43423 234 aa27.41■■□□□ 1.98
KDM5A-210ENST00000544760 SYNJ1O43426 1573 aa27.41■■□□□ 1.98
KDM5A-210ENST00000544760 CEP164Q9UPV0 1460 aa27.39■■□□□ 1.98
KDM5A-210ENST00000544760 C11orf95C9JLR9 678 aaPredicted RBP27.39■■□□□ 1.98
KDM5A-210ENST00000544760 WASHC2AQ641Q2 1341 aa27.39■■□□□ 1.97
KDM5A-210ENST00000544760 IRX6P78412 446 aaPredicted RBP27.36■■□□□ 1.97
KDM5A-210ENST00000544760 KIF21AQ7Z4S6 1674 aa27.36■■□□□ 1.97
KDM5A-210ENST00000544760 PKNOX2Q96KN3 472 aa27.34■■□□□ 1.97
KDM5A-210ENST00000544760 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
KDM5A-210ENST00000544760 CUX1P39880 1505 aa27.34■■□□□ 1.97
KDM5A-210ENST00000544760 EIF5BO60841 1220 aaKnown RBP27.33■■□□□ 1.97
KDM5A-210ENST00000544760 IPO9Q96P70 1041 aaKnown RBP27.33■■□□□ 1.97
KDM5A-210ENST00000544760 BIVM-ERCC5R4GMW8 1640 aa27.32■■□□□ 1.96
KDM5A-210ENST00000544760 MAPKBP1O60336 1514 aa27.3■■□□□ 1.96
KDM5A-210ENST00000544760 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
KDM5A-210ENST00000544760 RRBP1Q9P2E9 1410 aaKnown RBP27.29■■□□□ 1.96
KDM5A-210ENST00000544760 WASHC2CQ9Y4E1 1318 aa27.26■■□□□ 1.95
KDM5A-210ENST00000544760 ANP32AP39687 249 aaKnown RBP27.25■■□□□ 1.95
KDM5A-210ENST00000544760 ZBTB47Q9UFB7 747 aaPredicted RBP27.24■■□□□ 1.95
KDM5A-210ENST00000544760 USP35Q9P2H5 1018 aa27.21■■□□□ 1.95
KDM5A-210ENST00000544760 DNMBPQ6XZF7 1577 aa27.2■■□□□ 1.95
KDM5A-210ENST00000544760 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
KDM5A-210ENST00000544760 HNRNPUQ00839 825 aaKnown RBP eCLIP27.18■■□□□ 1.94
KDM5A-210ENST00000544760 TOPBP1Q92547 1522 aa27.17■■□□□ 1.94
KDM5A-210ENST00000544760 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
KDM5A-210ENST00000544760 B4GALNT3Q6L9W6 998 aa27.15■■□□□ 1.94
KDM5A-210ENST00000544760 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
KDM5A-210ENST00000544760 TIMELESSQ9UNS1 1208 aa27.09■■□□□ 1.93
KDM5A-210ENST00000544760 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
KDM5A-210ENST00000544760 RSPH6AQ9H0K4 717 aa27.04■■□□□ 1.92
KDM5A-210ENST00000544760 RAB3GAP2Q9H2M9 1393 aa27.03■■□□□ 1.92
KDM5A-210ENST00000544760 POLA1P09884 1462 aaPredicted RBP27.01■■□□□ 1.92
KDM5A-210ENST00000544760 CCNB3Q8WWL7 1395 aa27.01■■□□□ 1.91
KDM5A-210ENST00000544760 THOC2Q8NI27 1593 aaKnown RBP27■■□□□ 1.91
KDM5A-210ENST00000544760 WDR62O43379 1518 aa27■■□□□ 1.91
KDM5A-210ENST00000544760 NEFMP07197 916 aa26.98■■□□□ 1.91
KDM5A-210ENST00000544760 BRPF3Q9ULD4 1205 aa26.96■■□□□ 1.91
KDM5A-210ENST00000544760 GLIPR1L2Q4G1C9 344 aa26.92■■□□□ 1.9
KDM5A-210ENST00000544760 RAPGEF2Q9Y4G8 1499 aa26.92■■□□□ 1.9
KDM5A-210ENST00000544760 KANK4Q5T7N3 995 aaPredicted RBP26.91■■□□□ 1.9
KDM5A-210ENST00000544760 RAD54L2Q9Y4B4 1467 aa26.91■■□□□ 1.9
KDM5A-210ENST00000544760 PPM1GO15355 546 aaPredicted RBP26.91■■□□□ 1.9
KDM5A-210ENST00000544760 HIRIP3Q9BW71 556 aaPredicted RBP26.88■■□□□ 1.89
KDM5A-210ENST00000544760 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
KDM5A-210ENST00000544760 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
KDM5A-210ENST00000544760 SETD5Q9C0A6 1442 aa26.85■■□□□ 1.89
KDM5A-210ENST00000544760 SIN3AQ96ST3 1273 aa26.84■■□□□ 1.89
KDM5A-210ENST00000544760 KIF27Q86VH2 1401 aa26.83■■□□□ 1.89
KDM5A-210ENST00000544760 GSE1Q14687 1217 aa26.83■■□□□ 1.89
KDM5A-210ENST00000544760 ZBED9Q6R2W3 1325 aa26.81■■□□□ 1.88
KDM5A-210ENST00000544760 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
KDM5A-210ENST00000544760 FAM43AQ8N2R8 423 aa26.79■■□□□ 1.88
KDM5A-210ENST00000544760 LAS1LQ9Y4W2 734 aaKnown RBP26.79■■□□□ 1.88
KDM5A-210ENST00000544760 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
KDM5A-210ENST00000544760 ZMYND15Q9H091 742 aa26.71■■□□□ 1.87
KDM5A-210ENST00000544760 TDRD9Q8NDG6 1382 aaKnown RBP26.68■■□□□ 1.86
KDM5A-210ENST00000544760 RNF123Q5XPI4 1314 aa26.67■■□□□ 1.86
KDM5A-210ENST00000544760 PODXL2Q9NZ53 605 aa26.67■■□□□ 1.86
KDM5A-210ENST00000544760 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
KDM5A-210ENST00000544760 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
KDM5A-210ENST00000544760 SMG6Q86US8 1419 aaKnown RBP26.64■■□□□ 1.86
KDM5A-210ENST00000544760 IGF1RP08069 1367 aa26.64■■□□□ 1.86
KDM5A-210ENST00000544760 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.85
KDM5A-210ENST00000544760 SLC24A1O60721 1099 aa26.63■■□□□ 1.85
KDM5A-210ENST00000544760 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
KDM5A-210ENST00000544760 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
KDM5A-210ENST00000544760 VSIG10Q8N0Z9 540 aa26.61■■□□□ 1.85
KDM5A-210ENST00000544760 FRAT1Q92837 279 aaPredicted RBP26.6■■□□□ 1.85
KDM5A-210ENST00000544760 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
KDM5A-210ENST00000544760 NPM2Q86SE8 214 aaKnown RBP26.59■■□□□ 1.85
KDM5A-210ENST00000544760 DAXXQ9UER7 740 aaPredicted RBP26.59■■□□□ 1.85
KDM5A-210ENST00000544760 PRXQ9BXM0 1461 aa26.58■■□□□ 1.85
KDM5A-210ENST00000544760 NCOA2Q15596 1464 aa26.57■■□□□ 1.84
KDM5A-210ENST00000544760 AQRO60306 1485 aaKnown RBP eCLIP26.57■■□□□ 1.846e-7■■□□□ 11.9
KDM5A-210ENST00000544760 TCERG1O14776 1098 aaKnown RBP26.56■■□□□ 1.84
KDM5A-210ENST00000544760 PLEKHG5O94827 1062 aa26.56■■□□□ 1.84
KDM5A-210ENST00000544760 AKNAQ7Z591 1439 aa26.55■■□□□ 1.84
KDM5A-210ENST00000544760 CCDC184Q52MB2 194 aa26.54■■□□□ 1.84
KDM5A-210ENST00000544760 TONSLQ96HA7 1378 aa26.54■■□□□ 1.84
KDM5A-210ENST00000544760 NFKBIBQ15653 356 aa26.53■■□□□ 1.84
KDM5A-210ENST00000544760 CNTLNQ9NXG0 1405 aa26.52■■□□□ 1.84
KDM5A-210ENST00000544760 DDRGK1Q96HY6 314 aa26.51■■□□□ 1.84
KDM5A-210ENST00000544760 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
KDM5A-210ENST00000544760 EIF4G3O43432 1585 aaKnown RBP26.51■■□□□ 1.83
KDM5A-210ENST00000544760 PDE4AP27815 886 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms