RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
CDK2AP1-206ENST00000544658 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
CDK2AP1-206ENST00000544658 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
CDK2AP1-206ENST00000544658 FBLN2P98095 1184 aa15.72■□□□□ 0.11
CDK2AP1-206ENST00000544658 SYNJ2O15056 1496 aa15.71■□□□□ 0.11
CDK2AP1-206ENST00000544658 PRXQ9BXM0 1461 aa15.71■□□□□ 0.11
CDK2AP1-206ENST00000544658 CUL7Q14999 1698 aa15.7■□□□□ 0.1
CDK2AP1-206ENST00000544658 EEA1Q15075 1411 aa15.7■□□□□ 0.1
CDK2AP1-206ENST00000544658 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
CDK2AP1-206ENST00000544658 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
CDK2AP1-206ENST00000544658 RAPGEF2Q9Y4G8 1499 aa15.68■□□□□ 0.1
CDK2AP1-206ENST00000544658 CHMP7Q8WUX9 453 aaPredicted RBP15.68■□□□□ 0.1
CDK2AP1-206ENST00000544658 CEP170Q5SW79 1584 aa15.65■□□□□ 0.1
CDK2AP1-206ENST00000544658 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
CDK2AP1-206ENST00000544658 KIF21BO75037 1637 aa15.61■□□□□ 0.09
CDK2AP1-206ENST00000544658 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
CDK2AP1-206ENST00000544658 NUP160Q12769 1436 aa15.6■□□□□ 0.09
CDK2AP1-206ENST00000544658 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
CDK2AP1-206ENST00000544658 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
CDK2AP1-206ENST00000544658 CLASP1Q7Z460 1538 aa15.56■□□□□ 0.08
CDK2AP1-206ENST00000544658 GOLGA3Q08378 1498 aa15.52■□□□□ 0.08
CDK2AP1-206ENST00000544658 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
CDK2AP1-206ENST00000544658 ERCC6L2Q5T890 1561 aa15.49■□□□□ 0.07
CDK2AP1-206ENST00000544658 KIAA0586Q9BVV6 1533 aa15.49■□□□□ 0.07
CDK2AP1-206ENST00000544658 UBTFP17480 764 aaKnown RBP15.48■□□□□ 0.07
CDK2AP1-206ENST00000544658 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
CDK2AP1-206ENST00000544658 SHROOM2Q13796 1616 aa15.46■□□□□ 0.06
CDK2AP1-206ENST00000544658 IQGAP2Q13576 1575 aa15.45■□□□□ 0.06
CDK2AP1-206ENST00000544658 RANGAP1P46060 587 aaPredicted RBP15.45■□□□□ 0.06
CDK2AP1-206ENST00000544658 JPH4Q96JJ6 628 aa15.45■□□□□ 0.06
CDK2AP1-206ENST00000544658 TNIKQ9UKE5 1360 aa15.4■□□□□ 0.06
CDK2AP1-206ENST00000544658 DISP1Q96F81 1524 aa15.4■□□□□ 0.06
CDK2AP1-206ENST00000544658 UGGT2Q9NYU1 1516 aa15.4■□□□□ 0.06
CDK2AP1-206ENST00000544658 PRG4Q92954 1404 aaPredicted RBP15.4■□□□□ 0.06
CDK2AP1-206ENST00000544658 RIMBP3CA6NJZ7 1639 aa15.37■□□□□ 0.05
CDK2AP1-206ENST00000544658 RIMBP3BA6NNM3 1639 aa15.37■□□□□ 0.05
CDK2AP1-206ENST00000544658 RIMBP3Q9UFD9 1639 aa15.37■□□□□ 0.05
CDK2AP1-206ENST00000544658 P3H3Q8IVL6 736 aa15.37■□□□□ 0.05
CDK2AP1-206ENST00000544658 ARHGEF11O15085 1522 aa15.37■□□□□ 0.05
CDK2AP1-206ENST00000544658 SAMD9Q5K651 1589 aa15.34■□□□□ 0.05
CDK2AP1-206ENST00000544658 KIAA0556O60303 1618 aa15.34■□□□□ 0.05
CDK2AP1-206ENST00000544658 ARHGAP35Q9NRY4 1499 aa15.33■□□□□ 0.05
CDK2AP1-206ENST00000544658 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
CDK2AP1-206ENST00000544658 TTBK1Q5TCY1 1321 aaPredicted RBP15.31■□□□□ 0.04
CDK2AP1-206ENST00000544658 CEP162Q5TB80 1403 aa15.31■□□□□ 0.04
CDK2AP1-206ENST00000544658 FHOD3Q2V2M9 1422 aa15.3■□□□□ 0.04
CDK2AP1-206ENST00000544658 ARAP1Q96P48 1450 aa15.3■□□□□ 0.04
CDK2AP1-206ENST00000544658 CLIP1P30622 1438 aa15.28■□□□□ 0.04
CDK2AP1-206ENST00000544658 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
CDK2AP1-206ENST00000544658 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
CDK2AP1-206ENST00000544658 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
CDK2AP1-206ENST00000544658 CYB5RLQ6IPT4 315 aa15.23■□□□□ 0.03
CDK2AP1-206ENST00000544658 PTPRGP23470 1445 aa15.22■□□□□ 0.03
CDK2AP1-206ENST00000544658 PLB1Q6P1J6 1458 aa15.2■□□□□ 0.02
CDK2AP1-206ENST00000544658 ABCA8O94911 1581 aa15.17■□□□□ 0.02
CDK2AP1-206ENST00000544658 ADCY10Q96PN6 1610 aa15.16■□□□□ 0.02
CDK2AP1-206ENST00000544658 ARID3CA6NKF2 412 aa15.14■□□□□ 0.01
CDK2AP1-206ENST00000544658 LRRIQ1Q96JM4 1722 aa15.14■□□□□ 0.01
CDK2AP1-206ENST00000544658 UACAQ9BZF9 1416 aa15.13■□□□□ 0.01
CDK2AP1-206ENST00000544658 PCF11O94913 1555 aaKnown RBP15.12■□□□□ 0.01
CDK2AP1-206ENST00000544658 RAPGEF6Q8TEU7 1601 aa15.12■□□□□ 0.01
CDK2AP1-206ENST00000544658 NUP153P49790 1475 aaKnown RBP15.1■□□□□ 0.01
CDK2AP1-206ENST00000544658 ABCC2Q92887 1545 aa15.1■□□□□ 0.01
CDK2AP1-206ENST00000544658 UHRF1BP1LA0JNW5 1464 aa15.08■□□□□ 0.01
CDK2AP1-206ENST00000544658 FMN1Q68DA7 1419 aa15.08■□□□□ 0
CDK2AP1-206ENST00000544658 VPS8Q8N3P4 1428 aa15.08■□□□□ 0
CDK2AP1-206ENST00000544658 CASKIN1Q8WXD9 1431 aa15.07■□□□□ 0
CDK2AP1-206ENST00000544658 ATP1B4Q9UN42 357 aaPredicted RBP15.06■□□□□ 0
CDK2AP1-206ENST00000544658 ATP10BO94823 1461 aa15.06■□□□□ 0
CDK2AP1-206ENST00000544658 CDK13Q14004 1512 aaKnown RBP15.06■□□□□ 0
CDK2AP1-206ENST00000544658 ZCCHC11Q5TAX3 1644 aaKnown RBP15.05■□□□□ -0
CDK2AP1-206ENST00000544658 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
CDK2AP1-206ENST00000544658 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
CDK2AP1-206ENST00000544658 EPRSP07814 1512 aaKnown RBP15.02■□□□□ -0
CDK2AP1-206ENST00000544658 FYCO1Q9BQS8 1478 aa15.01□□□□□ -0.01
CDK2AP1-206ENST00000544658 HECW1Q76N89 1606 aa15.01□□□□□ -0.01
CDK2AP1-206ENST00000544658 MAGI3Q5TCQ9 1506 aa14.99□□□□□ -0.01
CDK2AP1-206ENST00000544658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDK2AP1-206ENST00000544658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.95□□□□□ -0.02
CDK2AP1-206ENST00000544658 HNRNPUL2Q1KMD3 747 aaKnown RBP14.95□□□□□ -0.02
CDK2AP1-206ENST00000544658 KANK4Q5T7N3 995 aaPredicted RBP14.95□□□□□ -0.02
CDK2AP1-206ENST00000544658 ASXL2Q76L83 1435 aa14.94□□□□□ -0.02
CDK2AP1-206ENST00000544658 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
CDK2AP1-206ENST00000544658 TIAM1Q13009 1591 aa14.93□□□□□ -0.02
CDK2AP1-206ENST00000544658 CFAP43Q8NDM7 1665 aa14.93□□□□□ -0.02
CDK2AP1-206ENST00000544658 NPM1P06748 294 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDK2AP1-206ENST00000544658 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
CDK2AP1-206ENST00000544658 CCDC18Q5T9S5 1454 aa14.9□□□□□ -0.02
CDK2AP1-206ENST00000544658 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
CDK2AP1-206ENST00000544658 KIF14Q15058 1648 aa14.89□□□□□ -0.03
CDK2AP1-206ENST00000544658 WDR7Q9Y4E6 1490 aa14.89□□□□□ -0.03
CDK2AP1-206ENST00000544658 KIF13AQ9H1H9 1805 aa14.87□□□□□ -0.03
CDK2AP1-206ENST00000544658 MAP3K1Q13233 1512 aa14.87□□□□□ -0.03
CDK2AP1-206ENST00000544658 PLEKHD1A6NEE1 506 aa14.86□□□□□ -0.03
CDK2AP1-206ENST00000544658 LRRC9Q6ZRR7 1453 aa14.86□□□□□ -0.03
CDK2AP1-206ENST00000544658 DIP2BQ9P265 1576 aa14.85□□□□□ -0.03
CDK2AP1-206ENST00000544658 TROQ12816 1431 aaPredicted RBP14.85□□□□□ -0.03
CDK2AP1-206ENST00000544658 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
CDK2AP1-206ENST00000544658 TTC37Q6PGP7 1564 aa14.83□□□□□ -0.04
CDK2AP1-206ENST00000544658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.044e-6■■■■■ 53.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms