RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 RUSC2Q8N2Y8 1516 aa27.03■■□□□ 1.92
LDHB-210ENST00000544151 IGF1RP08069 1367 aa26.96■■□□□ 1.91
LDHB-210ENST00000544151 PRG4Q92954 1404 aaPredicted RBP26.85■■□□□ 1.89
LDHB-210ENST00000544151 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
LDHB-210ENST00000544151 KIAA0586Q9BVV6 1533 aa26.8■■□□□ 1.88
LDHB-210ENST00000544151 JPH4Q96JJ6 628 aa26.79■■□□□ 1.88
LDHB-210ENST00000544151 TRHP20396 242 aaPredicted RBP26.78■■□□□ 1.88
LDHB-210ENST00000544151 SENP3Q9H4L4 574 aaPredicted RBP26.72■■□□□ 1.87
LDHB-210ENST00000544151 IQGAP2Q13576 1575 aa26.7■■□□□ 1.86
LDHB-210ENST00000544151 RAPGEF2Q9Y4G8 1499 aa26.68■■□□□ 1.86
LDHB-210ENST00000544151 CTTNBP2Q8WZ74 1663 aa26.61■■□□□ 1.85
LDHB-210ENST00000544151 ADCY10Q96PN6 1610 aa26.58■■□□□ 1.85
LDHB-210ENST00000544151 CARMIL2Q6F5E8 1435 aa26.53■■□□□ 1.84
LDHB-210ENST00000544151 KIF13AQ9H1H9 1805 aa26.51■■□□□ 1.83
LDHB-210ENST00000544151 UGGT2Q9NYU1 1516 aa26.49■■□□□ 1.83
LDHB-210ENST00000544151 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
LDHB-210ENST00000544151 DISP1Q96F81 1524 aa26.48■■□□□ 1.83
LDHB-210ENST00000544151 KIAA0556O60303 1618 aa26.47■■□□□ 1.83
LDHB-210ENST00000544151 TNIKQ9UKE5 1360 aa26.46■■□□□ 1.83
LDHB-210ENST00000544151 PTPRGP23470 1445 aa26.45■■□□□ 1.82
LDHB-210ENST00000544151 MAPKBP1O60336 1514 aa26.44■■□□□ 1.82
LDHB-210ENST00000544151 TTBK1Q5TCY1 1321 aaPredicted RBP26.44■■□□□ 1.82
LDHB-210ENST00000544151 NPM1P06748 294 aaKnown RBP eCLIP26.4■■□□□ 1.82
LDHB-210ENST00000544151 DIP2BQ9P265 1576 aa26.37■■□□□ 1.81
LDHB-210ENST00000544151 EEA1Q15075 1411 aa26.35■■□□□ 1.81
LDHB-210ENST00000544151 ABCC10Q5T3U5 1492 aa26.33■■□□□ 1.81
LDHB-210ENST00000544151 ABCC2Q92887 1545 aa26.33■■□□□ 1.81
LDHB-210ENST00000544151 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
LDHB-210ENST00000544151 UACAQ9BZF9 1416 aa26.3■■□□□ 1.8
LDHB-210ENST00000544151 UHRF1BP1LA0JNW5 1464 aa26.3■■□□□ 1.8
LDHB-210ENST00000544151 GOLGA3Q08378 1498 aa26.3■■□□□ 1.8
LDHB-210ENST00000544151 FAM69CQ0P6D2 419 aa26.23■■□□□ 1.79
LDHB-210ENST00000544151 ZCCHC11Q5TAX3 1644 aaKnown RBP26.23■■□□□ 1.79
LDHB-210ENST00000544151 TSPOAP1O95153 1857 aa26.21■■□□□ 1.79
LDHB-210ENST00000544151 FAM9AQ8IZU1 332 aaPredicted RBP26.2■■□□□ 1.78
LDHB-210ENST00000544151 KIF21BO75037 1637 aa26.2■■□□□ 1.78
LDHB-210ENST00000544151 KDM5BQ9UGL1 1544 aa26.19■■□□□ 1.78
LDHB-210ENST00000544151 ASXL2Q76L83 1435 aa26.18■■□□□ 1.78
LDHB-210ENST00000544151 PLB1Q6P1J6 1458 aa26.17■■□□□ 1.78
LDHB-210ENST00000544151 SAMD9Q5K651 1589 aa26.16■■□□□ 1.78
LDHB-210ENST00000544151 ABCA8O94911 1581 aa26.15■■□□□ 1.78
LDHB-210ENST00000544151 GLI2P10070 1586 aa26.09■■□□□ 1.77
LDHB-210ENST00000544151 PPRC1Q5VV67 1664 aaKnown RBP26.05■■□□□ 1.76
LDHB-210ENST00000544151 P3H3Q8IVL6 736 aa26.04■■□□□ 1.76
LDHB-210ENST00000544151 EPRSP07814 1512 aaKnown RBP26.04■■□□□ 1.76
LDHB-210ENST00000544151 KDM6BO15054 1643 aa26.03■■□□□ 1.76
LDHB-210ENST00000544151 WDR7Q9Y4E6 1490 aa26.02■■□□□ 1.76
LDHB-210ENST00000544151 MAP3K4Q9Y6R4 1608 aa26.02■■□□□ 1.76
LDHB-210ENST00000544151 RAPGEF6Q8TEU7 1601 aa25.99■■□□□ 1.75
LDHB-210ENST00000544151 RANGAP1P46060 587 aaPredicted RBP25.98■■□□□ 1.75
LDHB-210ENST00000544151 EFCAB5A4FU69 1503 aa25.97■■□□□ 1.75
LDHB-210ENST00000544151 FHOD3Q2V2M9 1422 aa25.96■■□□□ 1.75
LDHB-210ENST00000544151 EHMT2Q96KQ7 1210 aa25.92■■□□□ 1.74
LDHB-210ENST00000544151 CFAP43Q8NDM7 1665 aa25.91■■□□□ 1.74
LDHB-210ENST00000544151 ARID3CA6NKF2 412 aa25.88■■□□□ 1.73
LDHB-210ENST00000544151 ATP10BO94823 1461 aa25.86■■□□□ 1.73
LDHB-210ENST00000544151 TEX14Q8IWB6 1497 aa25.86■■□□□ 1.73
LDHB-210ENST00000544151 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
LDHB-210ENST00000544151 NUP153P49790 1475 aaKnown RBP25.84■■□□□ 1.73
LDHB-210ENST00000544151 KCNH8Q96L42 1107 aa25.79■■□□□ 1.72
LDHB-210ENST00000544151 CD109Q6YHK3 1445 aa25.77■■□□□ 1.72
LDHB-210ENST00000544151 ABCA9Q8IUA7 1624 aa25.75■■□□□ 1.71
LDHB-210ENST00000544151 MAGI3Q5TCQ9 1506 aa25.75■■□□□ 1.71
LDHB-210ENST00000544151 ARHGAP35Q9NRY4 1499 aa25.75■■□□□ 1.71
LDHB-210ENST00000544151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.73■■□□□ 1.71
LDHB-210ENST00000544151 HNRNPUL2Q1KMD3 747 aaKnown RBP25.73■■□□□ 1.71
LDHB-210ENST00000544151 COL17A1Q9UMD9 1497 aaPredicted RBP25.71■■□□□ 1.71
LDHB-210ENST00000544151 HECW1Q76N89 1606 aa25.7■■□□□ 1.7
LDHB-210ENST00000544151 FMN1Q68DA7 1419 aa25.67■■□□□ 1.7
LDHB-210ENST00000544151 CDK13Q14004 1512 aaKnown RBP25.67■■□□□ 1.7
LDHB-210ENST00000544151 LRRIQ1Q96JM4 1722 aa25.59■■□□□ 1.69
LDHB-210ENST00000544151 TTC37Q6PGP7 1564 aa25.57■■□□□ 1.68
LDHB-210ENST00000544151 PLEKHD1A6NEE1 506 aa25.56■■□□□ 1.68
LDHB-210ENST00000544151 PCF11O94913 1555 aaKnown RBP25.56■■□□□ 1.68
LDHB-210ENST00000544151 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.54■■□□□ 1.681e-8■■□□□ 12.6
LDHB-210ENST00000544151 ATP1B4Q9UN42 357 aaPredicted RBP25.54■■□□□ 1.68
LDHB-210ENST00000544151 ARAP3Q8WWN8 1544 aa25.53■■□□□ 1.68
LDHB-210ENST00000544151 NEO1Q92859 1461 aa25.52■■□□□ 1.68
LDHB-210ENST00000544151 CFAP74Q9C0B2 1584 aa25.51■■□□□ 1.67
LDHB-210ENST00000544151 CLIP1P30622 1438 aa25.46■■□□□ 1.67
LDHB-210ENST00000544151 PHLDB1Q86UU1 1377 aa25.46■■□□□ 1.67
LDHB-210ENST00000544151 KIF14Q15058 1648 aa25.46■■□□□ 1.67
LDHB-210ENST00000544151 ADGRL1O94910 1474 aa25.46■■□□□ 1.67
LDHB-210ENST00000544151 MYO5CQ9NQX4 1742 aa25.45■■□□□ 1.66
LDHB-210ENST00000544151 FRMPD1Q5SYB0 1578 aa25.44■■□□□ 1.66
LDHB-210ENST00000544151 KDM4FA0A1W2PPD8 638 aa25.44■■□□□ 1.66
LDHB-210ENST00000544151 CASKIN1Q8WXD9 1431 aa25.43■■□□□ 1.66
LDHB-210ENST00000544151 FANCAO15360 1455 aa25.42■■□□□ 1.66
LDHB-210ENST00000544151 CCDC18Q5T9S5 1454 aa25.41■■□□□ 1.66
LDHB-210ENST00000544151 FYCO1Q9BQS8 1478 aa25.4■■□□□ 1.66
LDHB-210ENST00000544151 RICTORQ6R327 1708 aa25.4■■□□□ 1.66
LDHB-210ENST00000544151 TROQ12816 1431 aaPredicted RBP25.38■■□□□ 1.65
LDHB-210ENST00000544151 CDK11AQ9UQ88 783 aaPredicted RBP25.38■■□□□ 1.65
LDHB-210ENST00000544151 AKNAQ7Z591 1439 aa25.36■■□□□ 1.65
LDHB-210ENST00000544151 RAPGEF3O95398 923 aa25.34■■□□□ 1.65
LDHB-210ENST00000544151 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
LDHB-210ENST00000544151 PLCH2O75038 1416 aa25.31■■□□□ 1.64
LDHB-210ENST00000544151 ARHGEF40Q8TER5 1519 aa25.3■■□□□ 1.64
LDHB-210ENST00000544151 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
LDHB-210ENST00000544151 PREX2Q70Z35 1606 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms