RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
SMG8-202ENST00000543872 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
SMG8-202ENST00000543872 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
SMG8-202ENST00000543872 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
SMG8-202ENST00000543872 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
SMG8-202ENST00000543872 PPP4R2Q9NY27 417 aa17.53■□□□□ 0.4
SMG8-202ENST00000543872 FAM50AQ14320 339 aaKnown RBP17.51■□□□□ 0.39
SMG8-202ENST00000543872 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
SMG8-202ENST00000543872 RRBP1Q9P2E9 1410 aaKnown RBP17.5■□□□□ 0.39
SMG8-202ENST00000543872 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
SMG8-202ENST00000543872 ERICH6BQ5W0A0 696 aa17.48■□□□□ 0.39
SMG8-202ENST00000543872 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
SMG8-202ENST00000543872 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
SMG8-202ENST00000543872 IL27Q8NEV9 243 aa17.45■□□□□ 0.38
SMG8-202ENST00000543872 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
SMG8-202ENST00000543872 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
SMG8-202ENST00000543872 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
SMG8-202ENST00000543872 CUX2O14529 1486 aa17.41■□□□□ 0.38
SMG8-202ENST00000543872 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
SMG8-202ENST00000543872 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.37
SMG8-202ENST00000543872 ANP32AP39687 249 aaKnown RBP17.37■□□□□ 0.37
SMG8-202ENST00000543872 ZBTB47Q9UFB7 747 aaPredicted RBP17.37■□□□□ 0.37
SMG8-202ENST00000543872 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
SMG8-202ENST00000543872 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
SMG8-202ENST00000543872 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.36
SMG8-202ENST00000543872 TIMELESSQ9UNS1 1208 aa17.32■□□□□ 0.36
SMG8-202ENST00000543872 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
SMG8-202ENST00000543872 IPO9Q96P70 1041 aaKnown RBP17.31■□□□□ 0.36
SMG8-202ENST00000543872 NPM2Q86SE8 214 aaKnown RBP17.3■□□□□ 0.36
SMG8-202ENST00000543872 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
SMG8-202ENST00000543872 SENP3-EIF4A1A0A087X0R7 540 aa17.28■□□□□ 0.36
SMG8-202ENST00000543872 PKNOX2Q96KN3 472 aa17.27■□□□□ 0.35
SMG8-202ENST00000543872 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
SMG8-202ENST00000543872 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
SMG8-202ENST00000543872 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
SMG8-202ENST00000543872 PHLDB1Q86UU1 1377 aa17.21■□□□□ 0.35
SMG8-202ENST00000543872 NEFMP07197 916 aa17.2■□□□□ 0.34
SMG8-202ENST00000543872 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
SMG8-202ENST00000543872 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
SMG8-202ENST00000543872 WASHC2AQ641Q2 1341 aa17.19■□□□□ 0.34
SMG8-202ENST00000543872 ARHGAP35Q9NRY4 1499 aa17.17■□□□□ 0.34
SMG8-202ENST00000543872 ZBED9Q6R2W3 1325 aa17.13■□□□□ 0.33
SMG8-202ENST00000543872 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
SMG8-202ENST00000543872 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
SMG8-202ENST00000543872 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
SMG8-202ENST00000543872 AKNAQ7Z591 1439 aa17.11■□□□□ 0.33
SMG8-202ENST00000543872 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
SMG8-202ENST00000543872 EIF4G2P78344 907 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMG8-202ENST00000543872 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
SMG8-202ENST00000543872 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
SMG8-202ENST00000543872 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
SMG8-202ENST00000543872 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
SMG8-202ENST00000543872 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
SMG8-202ENST00000543872 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
SMG8-202ENST00000543872 FHAD1B1AJZ9 1412 aa17.02■□□□□ 0.31
SMG8-202ENST00000543872 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
SMG8-202ENST00000543872 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
SMG8-202ENST00000543872 CNTLNQ9NXG0 1405 aa17■□□□□ 0.31
SMG8-202ENST00000543872 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
SMG8-202ENST00000543872 PDE4AP27815 886 aa16.98■□□□□ 0.31
SMG8-202ENST00000543872 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
SMG8-202ENST00000543872 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
SMG8-202ENST00000543872 PODXL2Q9NZ53 605 aa16.96■□□□□ 0.31
SMG8-202ENST00000543872 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
SMG8-202ENST00000543872 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
SMG8-202ENST00000543872 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
SMG8-202ENST00000543872 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
SMG8-202ENST00000543872 CCDC7Q96M83 1385 aa16.93■□□□□ 0.3
SMG8-202ENST00000543872 SLC4A3P48751 1232 aa16.93■□□□□ 0.3
SMG8-202ENST00000543872 GSE1Q14687 1217 aa16.93■□□□□ 0.3
SMG8-202ENST00000543872 EXOC6Q8TAG9 804 aa16.93■□□□□ 0.3
SMG8-202ENST00000543872 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
SMG8-202ENST00000543872 FOXD1Q16676 465 aa16.92■□□□□ 0.3
SMG8-202ENST00000543872 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
SMG8-202ENST00000543872 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
SMG8-202ENST00000543872 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
SMG8-202ENST00000543872 ATAD2BQ9ULI0 1458 aa16.9■□□□□ 0.3
SMG8-202ENST00000543872 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
SMG8-202ENST00000543872 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
SMG8-202ENST00000543872 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMG8-202ENST00000543872 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
SMG8-202ENST00000543872 BACH2Q9BYV9 841 aa16.88■□□□□ 0.29
SMG8-202ENST00000543872 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
SMG8-202ENST00000543872 NFKBIBQ15653 356 aa16.87■□□□□ 0.29
SMG8-202ENST00000543872 KIF7Q2M1P5 1343 aa16.86■□□□□ 0.29
SMG8-202ENST00000543872 RNF123Q5XPI4 1314 aa16.86■□□□□ 0.29
SMG8-202ENST00000543872 PTPRKQ15262 1439 aa16.86■□□□□ 0.29
SMG8-202ENST00000543872 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
SMG8-202ENST00000543872 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
SMG8-202ENST00000543872 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
SMG8-202ENST00000543872 IGF1RP08069 1367 aa16.84■□□□□ 0.29
SMG8-202ENST00000543872 ZMYND15Q9H091 742 aa16.84■□□□□ 0.29
SMG8-202ENST00000543872 CUX1P39880 1505 aa16.83■□□□□ 0.29
SMG8-202ENST00000543872 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.29
SMG8-202ENST00000543872 VSIG10Q8N0Z9 540 aa16.83■□□□□ 0.28
SMG8-202ENST00000543872 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
SMG8-202ENST00000543872 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
SMG8-202ENST00000543872 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
SMG8-202ENST00000543872 NCOA1Q15788 1441 aa16.81■□□□□ 0.28
SMG8-202ENST00000543872 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms