RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, human

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPPL3-208	ENST00000543854	KIAA0586	Q9BVV6	1533 aa		32.51	■■■□□ 2.8
SPPL3-208	ENST00000543854	PRG4	Q92954	1404 aa	Predicted RBP	32.51	■■■□□ 2.79
SPPL3-208	ENST00000543854	JPH4	Q96JJ6	628 aa		32.49	■■■□□ 2.79
SPPL3-208	ENST00000543854	RAPGEF2	Q9Y4G8	1499 aa		32.41	■■■□□ 2.78
SPPL3-208	ENST00000543854	IQGAP2	Q13576	1575 aa		32.34	■■■□□ 2.77
SPPL3-208	ENST00000543854	TRH	P20396	242 aa	Predicted RBP	32.27	■■■□□ 2.76
SPPL3-208	ENST00000543854	PRX	Q9BXM0	1461 aa		32.22	■■■□□ 2.75
SPPL3-208	ENST00000543854	CARMIL2	Q6F5E8	1435 aa		32.19	■■■□□ 2.74
SPPL3-208	ENST00000543854	CTTNBP2	Q8WZ74	1663 aa		32.19	■■■□□ 2.74
SPPL3-208	ENST00000543854	EEA1	Q15075	1411 aa		32.14	■■■□□ 2.74
SPPL3-208	ENST00000543854	UGGT2	Q9NYU1	1516 aa		32.14	■■■□□ 2.74
SPPL3-208	ENST00000543854	ADCY10	Q96PN6	1610 aa		32.1	■■■□□ 2.73
SPPL3-208	ENST00000543854	TNIK	Q9UKE5	1360 aa		32.08	■■■□□ 2.73
SPPL3-208	ENST00000543854	DISP1	Q96F81	1524 aa		32.08	■■■□□ 2.73
SPPL3-208	ENST00000543854	PTPRG	P23470	1445 aa		32.08	■■■□□ 2.73
SPPL3-208	ENST00000543854	CSRNP3	Q8WYN3	585 aa		32.05	■■■□□ 2.72
SPPL3-208	ENST00000543854	KIAA0556	O60303	1618 aa		32.04	■■■□□ 2.72
SPPL3-208	ENST00000543854	TTBK1	Q5TCY1	1321 aa	Predicted RBP	31.99	■■■□□ 2.71
SPPL3-208	ENST00000543854	NPM1	P06748	294 aa	Known RBP eCLIP	31.98	■■■□□ 2.71
SPPL3-208	ENST00000543854	CHIC1	Q5VXU3	224 aa		31.97	■■■□□ 2.71
SPPL3-208	ENST00000543854	MAPKBP1	O60336	1514 aa		31.96	■■■□□ 2.71
SPPL3-208	ENST00000543854	GOLGA3	Q08378	1498 aa		31.94	■■■□□ 2.7
SPPL3-208	ENST00000543854	FAM9A	Q8IZU1	332 aa	Predicted RBP	31.89	■■■□□ 2.7
SPPL3-208	ENST00000543854	KIF13A	Q9H1H9	1805 aa		31.87	■■■□□ 2.69
SPPL3-208	ENST00000543854	ABCC2	Q92887	1545 aa		31.87	■■■□□ 2.69
SPPL3-208	ENST00000543854	UHRF1BP1L	A0JNW5	1464 aa		31.87	■■■□□ 2.69
SPPL3-208	ENST00000543854	UACA	Q9BZF9	1416 aa		31.87	■■■□□ 2.69
SPPL3-208	ENST00000543854	KIF21B	O75037	1637 aa		31.86	■■■□□ 2.69
SPPL3-208	ENST00000543854	ABCC10	Q5T3U5	1492 aa		31.81	■■■□□ 2.68
SPPL3-208	ENST00000543854	DIP2B	Q9P265	1576 aa		31.8	■■■□□ 2.68
SPPL3-208	ENST00000543854	SAMD9	Q5K651	1589 aa		31.73	■■■□□ 2.67
SPPL3-208	ENST00000543854	KDM5B	Q9UGL1	1544 aa		31.71	■■■□□ 2.67
SPPL3-208	ENST00000543854	PLB1	Q6P1J6	1458 aa		31.71	■■■□□ 2.67
SPPL3-208	ENST00000543854	FAM69C	Q0P6D2	419 aa		31.7	■■■□□ 2.67
SPPL3-208	ENST00000543854	ZCCHC11	Q5TAX3	1644 aa	Known RBP	31.69	■■■□□ 2.66
SPPL3-208	ENST00000543854	ABCA8	O94911	1581 aa		31.68	■■■□□ 2.66
SPPL3-208	ENST00000543854	ASXL2	Q76L83	1435 aa		31.67	■■■□□ 2.66
SPPL3-208	ENST00000543854	P3H3	Q8IVL6	736 aa		31.6	■■■□□ 2.65
SPPL3-208	ENST00000543854	EFCAB5	A4FU69	1503 aa		31.56	■■■□□ 2.64
SPPL3-208	ENST00000543854	RANGAP1	P46060	587 aa	Predicted RBP	31.54	■■■□□ 2.64
SPPL3-208	ENST00000543854	GLI2	P10070	1586 aa		31.54	■■■□□ 2.64
SPPL3-208	ENST00000543854	TSPOAP1	O95153	1857 aa		31.52	■■■□□ 2.64
SPPL3-208	ENST00000543854	UBTF	P17480	764 aa	Known RBP	31.5	■■■□□ 2.63
SPPL3-208	ENST00000543854	EHMT2	Q96KQ7	1210 aa		31.5	■■■□□ 2.63
SPPL3-208	ENST00000543854	WDR7	Q9Y4E6	1490 aa		31.5	■■■□□ 2.63
SPPL3-208	ENST00000543854	FHOD3	Q2V2M9	1422 aa		31.49	■■■□□ 2.63
SPPL3-208	ENST00000543854	EPRS	P07814	1512 aa	Known RBP	31.49	■■■□□ 2.63
SPPL3-208	ENST00000543854	RAPGEF6	Q8TEU7	1601 aa		31.49	■■■□□ 2.63
SPPL3-208	ENST00000543854	MAP3K4	Q9Y6R4	1608 aa		31.42	■■■□□ 2.62
SPPL3-208	ENST00000543854	KDM6B	O15054	1643 aa		31.38	■■■□□ 2.61
SPPL3-208	ENST00000543854	PPRC1	Q5VV67	1664 aa	Known RBP	31.38	■■■□□ 2.61
SPPL3-208	ENST00000543854	ATP10B	O94823	1461 aa		31.37	■■■□□ 2.61
SPPL3-208	ENST00000543854	ARID3C	A6NKF2	412 aa		31.36	■■■□□ 2.61
SPPL3-208	ENST00000543854	NUP153	P49790	1475 aa	Known RBP	31.33	■■■□□ 2.61
SPPL3-208	ENST00000543854	TEX14	Q8IWB6	1497 aa		31.29	■■■□□ 2.6
SPPL3-208	ENST00000543854	ARHGAP35	Q9NRY4	1499 aa		31.29	■■■□□ 2.6
SPPL3-208	ENST00000543854	CFAP43	Q8NDM7	1665 aa		31.29	■■■□□ 2.6
SPPL3-208	ENST00000543854	KCNH8	Q96L42	1107 aa		31.24	■■■□□ 2.59
SPPL3-208	ENST00000543854	FMN1	Q68DA7	1419 aa		31.24	■■■□□ 2.59
SPPL3-208	ENST00000543854	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.22	■■■□□ 2.59
SPPL3-208	ENST00000543854	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.22	■■■□□ 2.59
SPPL3-208	ENST00000543854	CD109	Q6YHK3	1445 aa		31.2	■■■□□ 2.59
SPPL3-208	ENST00000543854	MAGI3	Q5TCQ9	1506 aa		31.18	■■■□□ 2.58
SPPL3-208	ENST00000543854	HECW1	Q76N89	1606 aa		31.16	■■■□□ 2.58
SPPL3-208	ENST00000543854	ABCA9	Q8IUA7	1624 aa		31.16	■■■□□ 2.58
SPPL3-208	ENST00000543854	CDK13	Q14004	1512 aa	Known RBP	31.1	■■■□□ 2.57
SPPL3-208	ENST00000543854	PLEKHD1	A6NEE1	506 aa		31.05	■■■□□ 2.56
SPPL3-208	ENST00000543854	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.04	■■■□□ 2.56
SPPL3-208	ENST00000543854	CLIP1	P30622	1438 aa		31.02	■■■□□ 2.56
SPPL3-208	ENST00000543854	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.02	■■■□□ 2.56
SPPL3-208	ENST00000543854	PCF11	O94913	1555 aa	Known RBP	31	■■■□□ 2.55
SPPL3-208	ENST00000543854	CASKIN1	Q8WXD9	1431 aa		30.94	■■■□□ 2.54
SPPL3-208	ENST00000543854	LRRIQ1	Q96JM4	1722 aa		30.94	■■■□□ 2.54
SPPL3-208	ENST00000543854	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	30.93	■■■□□ 2.54
SPPL3-208	ENST00000543854	TTC37	Q6PGP7	1564 aa		30.92	■■■□□ 2.54
SPPL3-208	ENST00000543854	NEO1	Q92859	1461 aa		30.91	■■■□□ 2.54
SPPL3-208	ENST00000543854	FYCO1	Q9BQS8	1478 aa		30.9	■■■□□ 2.54
SPPL3-208	ENST00000543854	ARAP3	Q8WWN8	1544 aa		30.9	■■■□□ 2.54
SPPL3-208	ENST00000543854	PHLDB1	Q86UU1	1377 aa		30.9	■■■□□ 2.54
SPPL3-208	ENST00000543854	CCDC18	Q5T9S5	1454 aa		30.89	■■■□□ 2.54
SPPL3-208	ENST00000543854	CDK11A	Q9UQ88	783 aa	Predicted RBP	30.89	■■■□□ 2.54
SPPL3-208	ENST00000543854	CFAP74	Q9C0B2	1584 aa		30.87	■■■□□ 2.53
SPPL3-208	ENST00000543854	KIF14	Q15058	1648 aa		30.86	■■■□□ 2.53
SPPL3-208	ENST00000543854	AEBP2	Q6ZN18	517 aa	Predicted RBP	30.85	■■■□□ 2.53
SPPL3-208	ENST00000543854	TRO	Q12816	1431 aa	Predicted RBP	30.83	■■■□□ 2.53
SPPL3-208	ENST00000543854	CEP162	Q5TB80	1403 aa		30.83	■■■□□ 2.53
SPPL3-208	ENST00000543854	FANCA	O15360	1455 aa		30.81	■■■□□ 2.52
SPPL3-208	ENST00000543854	MYO5C	Q9NQX4	1742 aa		30.78	■■■□□ 2.52
SPPL3-208	ENST00000543854	FRMPD1	Q5SYB0	1578 aa		30.73	■■■□□ 2.51
SPPL3-208	ENST00000543854	PLCH2	O75038	1416 aa		30.73	■■■□□ 2.51
SPPL3-208	ENST00000543854	AKNA	Q7Z591	1439 aa		30.72	■■■□□ 2.51
SPPL3-208	ENST00000543854	DENND4B	O75064	1496 aa	Predicted RBP	30.68	■■■□□ 2.5
SPPL3-208	ENST00000543854	RICTOR	Q6R327	1708 aa		30.67	■■■□□ 2.5
SPPL3-208	ENST00000543854	RAPGEF3	O95398	923 aa		30.67	■■■□□ 2.5
SPPL3-208	ENST00000543854	ADGRL1	O94910	1474 aa		30.67	■■■□□ 2.5
SPPL3-208	ENST00000543854	KDM4F	A0A1W2PPD8	638 aa		30.65	■■■□□ 2.5
SPPL3-208	ENST00000543854	LOC105371045	A0A1W2PR82	267 aa		30.64	■■■□□ 2.5
SPPL3-208	ENST00000543854	ARHGAP5	Q13017	1502 aa		30.63	■■■□□ 2.49
SPPL3-208	ENST00000543854	PREX2	Q70Z35	1606 aa		30.6	■■■□□ 2.49
SPPL3-208	ENST00000543854	ZMYM4	Q5VZL5	1548 aa		30.58	■■■□□ 2.49

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms