RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 MAPKBP1O60336 1514 aa16.46■□□□□ 0.23
CD4-211ENST00000543755 NUP160Q12769 1436 aa16.43■□□□□ 0.22
CD4-211ENST00000543755 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
CD4-211ENST00000543755 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
CD4-211ENST00000543755 DISP3Q9P2K9 1392 aa16.41■□□□□ 0.22
CD4-211ENST00000543755 CUX1P39880 1505 aa16.38■□□□□ 0.21
CD4-211ENST00000543755 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
CD4-211ENST00000543755 ADAMTS12P58397 1594 aa16.32■□□□□ 0.2
CD4-211ENST00000543755 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
CD4-211ENST00000543755 JPH4Q96JJ6 628 aa16.32■□□□□ 0.2
CD4-211ENST00000543755 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
CD4-211ENST00000543755 FHAD1B1AJZ9 1412 aa16.28■□□□□ 0.2
CD4-211ENST00000543755 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
CD4-211ENST00000543755 COL17A1Q9UMD9 1497 aaPredicted RBP16.23■□□□□ 0.19
CD4-211ENST00000543755 PPRC1Q5VV67 1664 aaKnown RBP16.19■□□□□ 0.18
CD4-211ENST00000543755 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
CD4-211ENST00000543755 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
CD4-211ENST00000543755 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
CD4-211ENST00000543755 ASXL2Q76L83 1435 aa16.12■□□□□ 0.17
CD4-211ENST00000543755 CERKQ8TCT0 537 aa16.11■□□□□ 0.17
CD4-211ENST00000543755 GLI2P10070 1586 aa16.11■□□□□ 0.17
CD4-211ENST00000543755 SPATA31D1Q6ZQQ2 1576 aa16.11■□□□□ 0.17
CD4-211ENST00000543755 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
CD4-211ENST00000543755 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
CD4-211ENST00000543755 TEX14Q8IWB6 1497 aa16.09■□□□□ 0.17
CD4-211ENST00000543755 ABCC2Q92887 1545 aa16.04■□□□□ 0.16
CD4-211ENST00000543755 PTPRGP23470 1445 aa16.03■□□□□ 0.16
CD4-211ENST00000543755 PTPRMP28827 1452 aa16.03■□□□□ 0.16
CD4-211ENST00000543755 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.16
CD4-211ENST00000543755 KIF21BO75037 1637 aa16.01■□□□□ 0.15
CD4-211ENST00000543755 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
CD4-211ENST00000543755 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
CD4-211ENST00000543755 HSPA2P54652 639 aa15.97■□□□□ 0.15
CD4-211ENST00000543755 KIAA0586Q9BVV6 1533 aa15.97■□□□□ 0.15
CD4-211ENST00000543755 CUL7Q14999 1698 aa15.95■□□□□ 0.14
CD4-211ENST00000543755 CARMIL2Q6F5E8 1435 aa15.92■□□□□ 0.14
CD4-211ENST00000543755 TNIKQ9UKE5 1360 aa15.9■□□□□ 0.14
CD4-211ENST00000543755 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
CD4-211ENST00000543755 PLPPR3Q6T4P5 718 aa15.89■□□□□ 0.13
CD4-211ENST00000543755 ADAMTSL3P82987 1691 aa15.86■□□□□ 0.13
CD4-211ENST00000543755 UHRF1BP1LA0JNW5 1464 aa15.86■□□□□ 0.13
CD4-211ENST00000543755 UACAQ9BZF9 1416 aa15.85■□□□□ 0.13
CD4-211ENST00000543755 ARID4BQ4LE39 1312 aaPredicted RBP15.85■□□□□ 0.13
CD4-211ENST00000543755 CD109Q6YHK3 1445 aa15.82■□□□□ 0.12
CD4-211ENST00000543755 MADDQ8WXG6 1647 aa15.81■□□□□ 0.12
CD4-211ENST00000543755 KDM5BQ9UGL1 1544 aa15.8■□□□□ 0.12
CD4-211ENST00000543755 ZCCHC11Q5TAX3 1644 aaKnown RBP15.79■□□□□ 0.12
CD4-211ENST00000543755 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
CD4-211ENST00000543755 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
CD4-211ENST00000543755 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
CD4-211ENST00000543755 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
CD4-211ENST00000543755 RIMS1Q86UR5 1692 aaKnown RBP15.73■□□□□ 0.11
CD4-211ENST00000543755 IGF1RP08069 1367 aa15.71■□□□□ 0.11
CD4-211ENST00000543755 CFAP43Q8NDM7 1665 aa15.7■□□□□ 0.1
CD4-211ENST00000543755 ARAP3Q8WWN8 1544 aa15.68■□□□□ 0.1
CD4-211ENST00000543755 IQGAP2Q13576 1575 aa15.68■□□□□ 0.1
CD4-211ENST00000543755 RAPGEF3O95398 923 aa15.67■□□□□ 0.1
CD4-211ENST00000543755 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
CD4-211ENST00000543755 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
CD4-211ENST00000543755 DISP1Q96F81 1524 aa15.63■□□□□ 0.09
CD4-211ENST00000543755 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
CD4-211ENST00000543755 YEATS2Q9ULM3 1422 aa15.61■□□□□ 0.09
CD4-211ENST00000543755 PHLDB1Q86UU1 1377 aa15.61■□□□□ 0.09
CD4-211ENST00000543755 MLECQ14165 292 aa15.57■□□□□ 0.08
CD4-211ENST00000543755 POGZQ7Z3K3 1410 aa15.54■□□□□ 0.08
CD4-211ENST00000543755 UBAP1LF5GYI3 381 aa15.53■□□□□ 0.08
CD4-211ENST00000543755 KIAA0556O60303 1618 aa15.53■□□□□ 0.08
CD4-211ENST00000543755 UGGT2Q9NYU1 1516 aa15.53■□□□□ 0.08
CD4-211ENST00000543755 SUPT5HO00267 1087 aaKnown RBP15.51■□□□□ 0.07
CD4-211ENST00000543755 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
CD4-211ENST00000543755 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
CD4-211ENST00000543755 MED1Q15648 1581 aaPredicted RBP15.5■□□□□ 0.07
CD4-211ENST00000543755 FRMPD1Q5SYB0 1578 aa15.5■□□□□ 0.07
CD4-211ENST00000543755 ARHGEF40Q8TER5 1519 aa15.5■□□□□ 0.07
CD4-211ENST00000543755 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
CD4-211ENST00000543755 FANCAO15360 1455 aa15.5■□□□□ 0.07
CD4-211ENST00000543755 IQSEC2Q5JU85 1478 aa15.5■□□□□ 0.07
CD4-211ENST00000543755 STRCQ7RTU9 1775 aa15.49■□□□□ 0.07
CD4-211ENST00000543755 LTBP4Q8N2S1 1624 aa15.48■□□□□ 0.07
CD4-211ENST00000543755 PREX1Q8TCU6 1659 aa15.48■□□□□ 0.07
CD4-211ENST00000543755 NEO1Q92859 1461 aa15.47■□□□□ 0.07
CD4-211ENST00000543755 PTPRTO14522 1441 aa15.47■□□□□ 0.07
CD4-211ENST00000543755 CEBPAP49715 358 aaPredicted RBP15.47■□□□□ 0.07
CD4-211ENST00000543755 TTC37Q6PGP7 1564 aa15.45■□□□□ 0.06
CD4-211ENST00000543755 UHRF1BP1Q6BDS2 1440 aa15.44■□□□□ 0.06
CD4-211ENST00000543755 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
CD4-211ENST00000543755 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
CD4-211ENST00000543755 FER1L4A9Z1Z3 1794 aa15.43■□□□□ 0.06
CD4-211ENST00000543755 ABCA8O94911 1581 aa15.42■□□□□ 0.06
CD4-211ENST00000543755 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
CD4-211ENST00000543755 ABCA9Q8IUA7 1624 aa15.4■□□□□ 0.06
CD4-211ENST00000543755 HSPA1LP34931 641 aa15.4■□□□□ 0.06
CD4-211ENST00000543755 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
CD4-211ENST00000543755 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
CD4-211ENST00000543755 SIGLEC1Q9BZZ2 1709 aa15.37■□□□□ 0.05
CD4-211ENST00000543755 ZFYVE16Q7Z3T8 1539 aa15.36■□□□□ 0.05
CD4-211ENST00000543755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
CD4-211ENST00000543755 PIP4K2BP78356 416 aa15.35■□□□□ 0.05
CD4-211ENST00000543755 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
CD4-211ENST00000543755 ZNF335Q9H4Z2 1342 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms