RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 ACIN1Q9UKV3 1341 aaKnown RBP12.01□□□□□ -0.49
TRIM59-208ENST00000543469 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRIM59-208ENST00000543469 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
TRIM59-208ENST00000543469 VPS8Q8N3P4 1428 aa11.99□□□□□ -0.49
TRIM59-208ENST00000543469 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
TRIM59-208ENST00000543469 RUSC2Q8N2Y8 1516 aa11.98□□□□□ -0.49
TRIM59-208ENST00000543469 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.49
TRIM59-208ENST00000543469 KIAA0586Q9BVV6 1533 aa11.95□□□□□ -0.5
TRIM59-208ENST00000543469 ABCA5Q8WWZ7 1642 aa11.95□□□□□ -0.5
TRIM59-208ENST00000543469 TTBK1Q5TCY1 1321 aaPredicted RBP11.95□□□□□ -0.5
TRIM59-208ENST00000543469 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
TRIM59-208ENST00000543469 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
TRIM59-208ENST00000543469 MTUS2Q5JR59 1369 aa11.93□□□□□ -0.5
TRIM59-208ENST00000543469 TARBP1Q13395 1621 aaKnown RBP11.92□□□□□ -0.5
TRIM59-208ENST00000543469 GRIN2AQ12879 1464 aa11.92□□□□□ -0.5
TRIM59-208ENST00000543469 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
TRIM59-208ENST00000543469 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
TRIM59-208ENST00000543469 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
TRIM59-208ENST00000543469 EIF4G3O43432 1585 aaKnown RBP11.9□□□□□ -0.5
TRIM59-208ENST00000543469 IQGAP2Q13576 1575 aa11.9□□□□□ -0.5
TRIM59-208ENST00000543469 PLEKHD1A6NEE1 506 aa11.9□□□□□ -0.51
TRIM59-208ENST00000543469 CCDC18Q5T9S5 1454 aa11.89□□□□□ -0.51
TRIM59-208ENST00000543469 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
TRIM59-208ENST00000543469 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
TRIM59-208ENST00000543469 PTPRGP23470 1445 aa11.84□□□□□ -0.51
TRIM59-208ENST00000543469 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
TRIM59-208ENST00000543469 FYCO1Q9BQS8 1478 aa11.83□□□□□ -0.52
TRIM59-208ENST00000543469 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
TRIM59-208ENST00000543469 FHOD3Q2V2M9 1422 aa11.8□□□□□ -0.52
TRIM59-208ENST00000543469 HECW1Q76N89 1606 aa11.8□□□□□ -0.52
TRIM59-208ENST00000543469 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
TRIM59-208ENST00000543469 UGGT2Q9NYU1 1516 aa11.79□□□□□ -0.52
TRIM59-208ENST00000543469 NUP160Q12769 1436 aa11.79□□□□□ -0.52
TRIM59-208ENST00000543469 MAP3K1Q13233 1512 aa11.78□□□□□ -0.52
TRIM59-208ENST00000543469 PRG4Q92954 1404 aaPredicted RBP11.78□□□□□ -0.52
TRIM59-208ENST00000543469 ARHGAP35Q9NRY4 1499 aa11.77□□□□□ -0.52
TRIM59-208ENST00000543469 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
TRIM59-208ENST00000543469 CCNB3Q8WWL7 1395 aa11.75□□□□□ -0.53
TRIM59-208ENST00000543469 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
TRIM59-208ENST00000543469 ARAP1Q96P48 1450 aa11.71□□□□□ -0.53
TRIM59-208ENST00000543469 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
TRIM59-208ENST00000543469 PPARGC1BQ86YN6 1023 aaKnown RBP11.71□□□□□ -0.53
TRIM59-208ENST00000543469 EHBP1L1Q8N3D4 1523 aa11.71□□□□□ -0.54
TRIM59-208ENST00000543469 TSPY4P0CV99 314 aa11.7□□□□□ -0.54
TRIM59-208ENST00000543469 TSPY10P0CW01 314 aa11.7□□□□□ -0.54
TRIM59-208ENST00000543469 UACAQ9BZF9 1416 aa11.68□□□□□ -0.54
TRIM59-208ENST00000543469 CFDP1Q9UEE9 299 aaPredicted RBP11.68□□□□□ -0.54
TRIM59-208ENST00000543469 KIAA0556O60303 1618 aa11.67□□□□□ -0.54
TRIM59-208ENST00000543469 ITGAEP38570 1179 aa11.67□□□□□ -0.54
TRIM59-208ENST00000543469 ARID3CA6NKF2 412 aa11.66□□□□□ -0.54
TRIM59-208ENST00000543469 SAMD9Q5K651 1589 aa11.65□□□□□ -0.54
TRIM59-208ENST00000543469 ZNF777Q9ULD5 760 aaPredicted RBP11.64□□□□□ -0.55
TRIM59-208ENST00000543469 TIAM1Q13009 1591 aa11.64□□□□□ -0.55
TRIM59-208ENST00000543469 EFCAB2Q5VUJ9 269 aa11.64□□□□□ -0.55
TRIM59-208ENST00000543469 LRRC9Q6ZRR7 1453 aa11.64□□□□□ -0.55
TRIM59-208ENST00000543469 PLEKHH2Q8IVE3 1493 aa11.63□□□□□ -0.55
TRIM59-208ENST00000543469 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
TRIM59-208ENST00000543469 TROQ12816 1431 aaPredicted RBP11.62□□□□□ -0.55
TRIM59-208ENST00000543469 RAPGEF6Q8TEU7 1601 aa11.61□□□□□ -0.55
TRIM59-208ENST00000543469 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
TRIM59-208ENST00000543469 EPRSP07814 1512 aaKnown RBP11.6□□□□□ -0.55
TRIM59-208ENST00000543469 MIA2Q96PC5 1412 aa11.6□□□□□ -0.55
TRIM59-208ENST00000543469 KCNH8Q96L42 1107 aa11.6□□□□□ -0.55
TRIM59-208ENST00000543469 CHD1O14646 1710 aa11.6□□□□□ -0.55
TRIM59-208ENST00000543469 PCF11O94913 1555 aaKnown RBP11.6□□□□□ -0.55
TRIM59-208ENST00000543469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRIM59-208ENST00000543469 TRIM52Q96A61 297 aa11.58□□□□□ -0.56
TRIM59-208ENST00000543469 MYOM3Q5VTT5 1437 aa11.58□□□□□ -0.56
TRIM59-208ENST00000543469 CLSPNQ9HAW4 1339 aa11.56□□□□□ -0.56
TRIM59-208ENST00000543469 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
TRIM59-208ENST00000543469 UHRF1BP1LA0JNW5 1464 aa11.55□□□□□ -0.56
TRIM59-208ENST00000543469 KIF14Q15058 1648 aa11.55□□□□□ -0.56
TRIM59-208ENST00000543469 DISP1Q96F81 1524 aa11.55□□□□□ -0.56
TRIM59-208ENST00000543469 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
TRIM59-208ENST00000543469 HRCP23327 699 aa11.54□□□□□ -0.56
TRIM59-208ENST00000543469 ANKRD30AQ9BXX3 1397 aa11.54□□□□□ -0.56
TRIM59-208ENST00000543469 CFAP43Q8NDM7 1665 aa11.54□□□□□ -0.56
TRIM59-208ENST00000543469 ABCC2Q92887 1545 aa11.54□□□□□ -0.56
TRIM59-208ENST00000543469 KANK4Q5T7N3 995 aaPredicted RBP11.52□□□□□ -0.56
TRIM59-208ENST00000543469 FGD6Q6ZV73 1430 aa11.52□□□□□ -0.57
TRIM59-208ENST00000543469 ESF1Q9H501 851 aaKnown RBP11.52□□□□□ -0.57
TRIM59-208ENST00000543469 CLASP1Q7Z460 1538 aa11.51□□□□□ -0.57
TRIM59-208ENST00000543469 RRBP1Q9P2E9 1410 aaKnown RBP11.5□□□□□ -0.57
TRIM59-208ENST00000543469 KANK1Q14678 1352 aa11.5□□□□□ -0.57
TRIM59-208ENST00000543469 PHLDB1Q86UU1 1377 aa11.5□□□□□ -0.57
TRIM59-208ENST00000543469 ITSN2Q9NZM3 1697 aa11.49□□□□□ -0.57
TRIM59-208ENST00000543469 CYB5RLQ6IPT4 315 aa11.49□□□□□ -0.57
TRIM59-208ENST00000543469 SETD5Q9C0A6 1442 aa11.49□□□□□ -0.57
TRIM59-208ENST00000543469 NUP153P49790 1475 aaKnown RBP11.47□□□□□ -0.57
TRIM59-208ENST00000543469 ABCA8O94911 1581 aa11.46□□□□□ -0.57
TRIM59-208ENST00000543469 SHROOM2Q13796 1616 aa11.46□□□□□ -0.57
TRIM59-208ENST00000543469 ARHGAP5Q13017 1502 aa11.46□□□□□ -0.58
TRIM59-208ENST00000543469 CDK13Q14004 1512 aaKnown RBP11.44□□□□□ -0.58
TRIM59-208ENST00000543469 ATP10BO94823 1461 aa11.44□□□□□ -0.58
TRIM59-208ENST00000543469 TIMELESSQ9UNS1 1208 aa11.44□□□□□ -0.58
TRIM59-208ENST00000543469 WDR7Q9Y4E6 1490 aa11.43□□□□□ -0.58
TRIM59-208ENST00000543469 SPAG9O60271 1321 aaKnown RBP11.43□□□□□ -0.58
TRIM59-208ENST00000543469 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
TRIM59-208ENST00000543469 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
TRIM59-208ENST00000543469 CFAP74Q9C0B2 1584 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms