RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 PRG4Q92954 1404 aaPredicted RBP36.93■■■■□ 3.5
PSME3-204ENST00000543428 RUSC2Q8N2Y8 1516 aa36.92■■■■□ 3.5
PSME3-204ENST00000543428 CARMIL1Q5VZK9 1371 aa36.82■■■■□ 3.49
PSME3-204ENST00000543428 KIAA0586Q9BVV6 1533 aa36.8■■■■□ 3.48
PSME3-204ENST00000543428 RAPGEF2Q9Y4G8 1499 aa36.54■■■■□ 3.44
PSME3-204ENST00000543428 NPM1P06748 294 aaKnown RBP eCLIP36.51■■■■□ 3.44
PSME3-204ENST00000543428 IQGAP2Q13576 1575 aa36.51■■■■□ 3.44
PSME3-204ENST00000543428 CARMIL2Q6F5E8 1435 aa36.47■■■■□ 3.43
PSME3-204ENST00000543428 TTBK1Q5TCY1 1321 aaPredicted RBP36.43■■■■□ 3.42
PSME3-204ENST00000543428 ADCY10Q96PN6 1610 aa36.42■■■■□ 3.42
PSME3-204ENST00000543428 PTPRGP23470 1445 aa36.42■■■■□ 3.42
PSME3-204ENST00000543428 TNIKQ9UKE5 1360 aa36.37■■■■□ 3.41
PSME3-204ENST00000543428 KIF13AQ9H1H9 1805 aa36.31■■■■□ 3.4
PSME3-204ENST00000543428 MAPKBP1O60336 1514 aa36.3■■■■□ 3.4
PSME3-204ENST00000543428 DISP1Q96F81 1524 aa36.26■■■■□ 3.4
PSME3-204ENST00000543428 UGGT2Q9NYU1 1516 aa36.26■■■■□ 3.4
PSME3-204ENST00000543428 FAM69CQ0P6D2 419 aa36.24■■■■□ 3.39
PSME3-204ENST00000543428 CTTNBP2Q8WZ74 1663 aa36.23■■■■□ 3.39
PSME3-204ENST00000543428 ABCC10Q5T3U5 1492 aa36.22■■■■□ 3.39
PSME3-204ENST00000543428 PRXQ9BXM0 1461 aa36.21■■■■□ 3.39
PSME3-204ENST00000543428 KIAA0556O60303 1618 aa36.16■■■■□ 3.38
PSME3-204ENST00000543428 ABCC2Q92887 1545 aa36.14■■■■□ 3.38
PSME3-204ENST00000543428 DIP2BQ9P265 1576 aa36.14■■■■□ 3.38
PSME3-204ENST00000543428 UACAQ9BZF9 1416 aa36.13■■■■□ 3.37
PSME3-204ENST00000543428 UHRF1BP1LA0JNW5 1464 aa36.1■■■■□ 3.37
PSME3-204ENST00000543428 CSRNP3Q8WYN3 585 aa36.09■■■■□ 3.37
PSME3-204ENST00000543428 GOLGA3Q08378 1498 aa36.06■■■■□ 3.36
PSME3-204ENST00000543428 EEA1Q15075 1411 aa36■■■■□ 3.35
PSME3-204ENST00000543428 ASXL2Q76L83 1435 aa35.99■■■■□ 3.35
PSME3-204ENST00000543428 PLB1Q6P1J6 1458 aa35.98■■■■□ 3.35
PSME3-204ENST00000543428 TSPOAP1O95153 1857 aa35.94■■■■□ 3.34
PSME3-204ENST00000543428 KDM5BQ9UGL1 1544 aa35.93■■■■□ 3.34
PSME3-204ENST00000543428 FAM9AQ8IZU1 332 aaPredicted RBP35.9■■■■□ 3.34
PSME3-204ENST00000543428 ZCCHC11Q5TAX3 1644 aaKnown RBP35.88■■■■□ 3.33
PSME3-204ENST00000543428 GLI2P10070 1586 aa35.81■■■■□ 3.32
PSME3-204ENST00000543428 P3H3Q8IVL6 736 aa35.81■■■■□ 3.32
PSME3-204ENST00000543428 ABCA8O94911 1581 aa35.78■■■■□ 3.32
PSME3-204ENST00000543428 KDM6BO15054 1643 aa35.78■■■■□ 3.32
PSME3-204ENST00000543428 AEBP2Q6ZN18 517 aaPredicted RBP35.76■■■■□ 3.32
PSME3-204ENST00000543428 EPRSP07814 1512 aaKnown RBP35.75■■■■□ 3.31
PSME3-204ENST00000543428 CHIC1Q5VXU3 224 aa35.73■■■■□ 3.31
PSME3-204ENST00000543428 RANGAP1P46060 587 aaPredicted RBP35.7■■■■□ 3.31
PSME3-204ENST00000543428 WDR7Q9Y4E6 1490 aa35.7■■■■□ 3.31
PSME3-204ENST00000543428 SAMD9Q5K651 1589 aa35.68■■■■□ 3.3
PSME3-204ENST00000543428 KIF21BO75037 1637 aa35.66■■■■□ 3.3
PSME3-204ENST00000543428 PPRC1Q5VV67 1664 aaKnown RBP35.65■■■■□ 3.3
PSME3-204ENST00000543428 MAP3K4Q9Y6R4 1608 aa35.64■■■■□ 3.3
PSME3-204ENST00000543428 ARID3CA6NKF2 412 aa35.6■■■■□ 3.29
PSME3-204ENST00000543428 KCNH8Q96L42 1107 aa35.59■■■■□ 3.29
PSME3-204ENST00000543428 TEX14Q8IWB6 1497 aa35.57■■■■□ 3.28
PSME3-204ENST00000543428 EHMT2Q96KQ7 1210 aa35.53■■■■□ 3.28
PSME3-204ENST00000543428 RAPGEF6Q8TEU7 1601 aa35.51■■■■□ 3.28
PSME3-204ENST00000543428 ATP10BO94823 1461 aa35.5■■■■□ 3.27
PSME3-204ENST00000543428 FHOD3Q2V2M9 1422 aa35.49■■■■□ 3.27
PSME3-204ENST00000543428 UBTFP17480 764 aaKnown RBP35.48■■■■□ 3.27
PSME3-204ENST00000543428 CD109Q6YHK3 1445 aa35.46■■■■□ 3.27
PSME3-204ENST00000543428 CFAP43Q8NDM7 1665 aa35.46■■■■□ 3.27
PSME3-204ENST00000543428 EFCAB5A4FU69 1503 aa35.44■■■■□ 3.26
PSME3-204ENST00000543428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.44■■■■□ 3.26
PSME3-204ENST00000543428 HNRNPUL2Q1KMD3 747 aaKnown RBP35.44■■■■□ 3.26
PSME3-204ENST00000543428 MAGI3Q5TCQ9 1506 aa35.37■■■■□ 3.25
PSME3-204ENST00000543428 COL17A1Q9UMD9 1497 aaPredicted RBP35.37■■■■□ 3.25
PSME3-204ENST00000543428 NUP153P49790 1475 aaKnown RBP35.35■■■■□ 3.25
PSME3-204ENST00000543428 ABCA9Q8IUA7 1624 aa35.24■■■■□ 3.23
PSME3-204ENST00000543428 PLEKHD1A6NEE1 506 aa35.21■■■■□ 3.23
PSME3-204ENST00000543428 KDM4FA0A1W2PPD8 638 aa35.2■■■■□ 3.23
PSME3-204ENST00000543428 ARHGAP35Q9NRY4 1499 aa35.15■■■■□ 3.22
PSME3-204ENST00000543428 FMN1Q68DA7 1419 aa35.15■■■■□ 3.22
PSME3-204ENST00000543428 ATP1B4Q9UN42 357 aaPredicted RBP35.14■■■■□ 3.22
PSME3-204ENST00000543428 ARAP3Q8WWN8 1544 aa35.09■■■■□ 3.21
PSME3-204ENST00000543428 PHLDB1Q86UU1 1377 aa35.09■■■■□ 3.21
PSME3-204ENST00000543428 CDK13Q14004 1512 aaKnown RBP35.07■■■■□ 3.21
PSME3-204ENST00000543428 ADGRL1O94910 1474 aa35.05■■■■□ 3.2
PSME3-204ENST00000543428 HECW1Q76N89 1606 aa35.05■■■■□ 3.2
PSME3-204ENST00000543428 NEO1Q92859 1461 aa35.03■■■■□ 3.2
PSME3-204ENST00000543428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.96■■■■□ 3.19
PSME3-204ENST00000543428 CDK11AQ9UQ88 783 aaPredicted RBP34.95■■■■□ 3.19
PSME3-204ENST00000543428 RAPGEF3O95398 923 aa34.94■■■■□ 3.18
PSME3-204ENST00000543428 TTC37Q6PGP7 1564 aa34.92■■■■□ 3.18
PSME3-204ENST00000543428 FANCAO15360 1455 aa34.89■■■■□ 3.18
PSME3-204ENST00000543428 CFAP74Q9C0B2 1584 aa34.88■■■■□ 3.17
PSME3-204ENST00000543428 AKNAQ7Z591 1439 aa34.85■■■■□ 3.17
PSME3-204ENST00000543428 DENND4BO75064 1496 aaPredicted RBP34.82■■■■□ 3.16
PSME3-204ENST00000543428 FRMPD1Q5SYB0 1578 aa34.8■■■■□ 3.16
PSME3-204ENST00000543428 CLIP1P30622 1438 aa34.79■■■■□ 3.16
PSME3-204ENST00000543428 LRRIQ1Q96JM4 1722 aa34.78■■■■□ 3.16
PSME3-204ENST00000543428 CASKIN1Q8WXD9 1431 aa34.78■■■■□ 3.16
PSME3-204ENST00000543428 PCF11O94913 1555 aaKnown RBP34.78■■■■□ 3.16
PSME3-204ENST00000543428 TROQ12816 1431 aaPredicted RBP34.77■■■■□ 3.16
PSME3-204ENST00000543428 KIF14Q15058 1648 aa34.77■■■■□ 3.16
PSME3-204ENST00000543428 PLCH2O75038 1416 aa34.76■■■■□ 3.16
PSME3-204ENST00000543428 CCDC18Q5T9S5 1454 aa34.73■■■■□ 3.15
PSME3-204ENST00000543428 MYO5CQ9NQX4 1742 aa34.73■■■■□ 3.15
PSME3-204ENST00000543428 RICTORQ6R327 1708 aa34.72■■■■□ 3.15
PSME3-204ENST00000543428 EFCAB2Q5VUJ9 269 aa34.69■■■■□ 3.14
PSME3-204ENST00000543428 FYCO1Q9BQS8 1478 aa34.67■■■■□ 3.14
PSME3-204ENST00000543428 ARID4BQ4LE39 1312 aaPredicted RBP34.67■■■■□ 3.14
PSME3-204ENST00000543428 SCAPERQ9BY12 1400 aa34.64■■■■□ 3.14
PSME3-204ENST00000543428 ARHGEF40Q8TER5 1519 aa34.64■■■■□ 3.14
PSME3-204ENST00000543428 ARHGAP5Q13017 1502 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms