RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
CIT-212ENST00000543239 RAPGEF2Q9Y4G8 1499 aa27.47■■□□□ 1.99
CIT-212ENST00000543239 JPH4Q96JJ6 628 aa27.47■■□□□ 1.99
CIT-212ENST00000543239 PRG4Q92954 1404 aaPredicted RBP27.45■■□□□ 1.98
CIT-212ENST00000543239 PRXQ9BXM0 1461 aa27.35■■□□□ 1.97
CIT-212ENST00000543239 EEA1Q15075 1411 aa27.34■■□□□ 1.97
CIT-212ENST00000543239 IQGAP2Q13576 1575 aa27.34■■□□□ 1.97
CIT-212ENST00000543239 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
CIT-212ENST00000543239 CSRNP3Q8WYN3 585 aa27.27■■□□□ 1.96
CIT-212ENST00000543239 CTTNBP2Q8WZ74 1663 aa27.22■■□□□ 1.95
CIT-212ENST00000543239 CARMIL2Q6F5E8 1435 aa27.22■■□□□ 1.95
CIT-212ENST00000543239 UGGT2Q9NYU1 1516 aa27.2■■□□□ 1.94
CIT-212ENST00000543239 DISP1Q96F81 1524 aa27.14■■□□□ 1.94
CIT-212ENST00000543239 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
CIT-212ENST00000543239 PTPRGP23470 1445 aa27.1■■□□□ 1.93
CIT-212ENST00000543239 KIAA0556O60303 1618 aa27.08■■□□□ 1.93
CIT-212ENST00000543239 FAM9AQ8IZU1 332 aaPredicted RBP27.08■■□□□ 1.93
CIT-212ENST00000543239 TRHP20396 242 aaPredicted RBP27.07■■□□□ 1.92
CIT-212ENST00000543239 KIF21BO75037 1637 aa27.05■■□□□ 1.92
CIT-212ENST00000543239 ADCY10Q96PN6 1610 aa27.05■■□□□ 1.92
CIT-212ENST00000543239 GOLGA3Q08378 1498 aa27.05■■□□□ 1.92
CIT-212ENST00000543239 NPM1P06748 294 aaKnown RBP eCLIP26.97■■□□□ 1.91
CIT-212ENST00000543239 TTBK1Q5TCY1 1321 aaPredicted RBP26.95■■□□□ 1.91
CIT-212ENST00000543239 UHRF1BP1LA0JNW5 1464 aa26.94■■□□□ 1.9
CIT-212ENST00000543239 MAPKBP1O60336 1514 aa26.94■■□□□ 1.9
CIT-212ENST00000543239 UACAQ9BZF9 1416 aa26.93■■□□□ 1.9
CIT-212ENST00000543239 ABCC2Q92887 1545 aa26.9■■□□□ 1.9
CIT-212ENST00000543239 SAMD9Q5K651 1589 aa26.88■■□□□ 1.89
CIT-212ENST00000543239 ABCC10Q5T3U5 1492 aa26.81■■□□□ 1.88
CIT-212ENST00000543239 KDM5BQ9UGL1 1544 aa26.8■■□□□ 1.88
CIT-212ENST00000543239 KIF13AQ9H1H9 1805 aa26.79■■□□□ 1.88
CIT-212ENST00000543239 PLB1Q6P1J6 1458 aa26.79■■□□□ 1.88
CIT-212ENST00000543239 ABCA8O94911 1581 aa26.79■■□□□ 1.88
CIT-212ENST00000543239 DIP2BQ9P265 1576 aa26.76■■□□□ 1.87
CIT-212ENST00000543239 EFCAB5A4FU69 1503 aa26.75■■□□□ 1.87
CIT-212ENST00000543239 UBTFP17480 764 aaKnown RBP26.75■■□□□ 1.87
CIT-212ENST00000543239 P3H3Q8IVL6 736 aa26.75■■□□□ 1.87
CIT-212ENST00000543239 ZCCHC11Q5TAX3 1644 aaKnown RBP26.72■■□□□ 1.87
CIT-212ENST00000543239 ASXL2Q76L83 1435 aa26.72■■□□□ 1.87
CIT-212ENST00000543239 FAM69CQ0P6D2 419 aa26.7■■□□□ 1.86
CIT-212ENST00000543239 EHMT2Q96KQ7 1210 aa26.69■■□□□ 1.86
CIT-212ENST00000543239 RANGAP1P46060 587 aaPredicted RBP26.68■■□□□ 1.86
CIT-212ENST00000543239 FHOD3Q2V2M9 1422 aa26.66■■□□□ 1.86
CIT-212ENST00000543239 RAPGEF6Q8TEU7 1601 aa26.62■■□□□ 1.85
CIT-212ENST00000543239 GLI2P10070 1586 aa26.61■■□□□ 1.85
CIT-212ENST00000543239 WDR7Q9Y4E6 1490 aa26.59■■□□□ 1.85
CIT-212ENST00000543239 EPRSP07814 1512 aaKnown RBP26.58■■□□□ 1.85
CIT-212ENST00000543239 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
CIT-212ENST00000543239 ATP10BO94823 1461 aa26.54■■□□□ 1.84
CIT-212ENST00000543239 NUP153P49790 1475 aaKnown RBP26.52■■□□□ 1.84
CIT-212ENST00000543239 FMN1Q68DA7 1419 aa26.49■■□□□ 1.83
CIT-212ENST00000543239 MAP3K4Q9Y6R4 1608 aa26.47■■□□□ 1.83
CIT-212ENST00000543239 TSPOAP1O95153 1857 aa26.47■■□□□ 1.83
CIT-212ENST00000543239 ARID3CA6NKF2 412 aa26.46■■□□□ 1.83
CIT-212ENST00000543239 PPRC1Q5VV67 1664 aaKnown RBP26.43■■□□□ 1.82
CIT-212ENST00000543239 CFAP43Q8NDM7 1665 aa26.39■■□□□ 1.82
CIT-212ENST00000543239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.38■■□□□ 1.81
CIT-212ENST00000543239 HNRNPUL2Q1KMD3 747 aaKnown RBP26.38■■□□□ 1.81
CIT-212ENST00000543239 KCNH8Q96L42 1107 aa26.38■■□□□ 1.81
CIT-212ENST00000543239 HECW1Q76N89 1606 aa26.38■■□□□ 1.81
CIT-212ENST00000543239 TEX14Q8IWB6 1497 aa26.37■■□□□ 1.81
CIT-212ENST00000543239 CLIP1P30622 1438 aa26.37■■□□□ 1.81
CIT-212ENST00000543239 KDM6BO15054 1643 aa26.36■■□□□ 1.81
CIT-212ENST00000543239 CD109Q6YHK3 1445 aa26.33■■□□□ 1.81
CIT-212ENST00000543239 MAGI3Q5TCQ9 1506 aa26.32■■□□□ 1.8
CIT-212ENST00000543239 ABCA9Q8IUA7 1624 aa26.32■■□□□ 1.8
CIT-212ENST00000543239 CDK13Q14004 1512 aaKnown RBP26.3■■□□□ 1.8
CIT-212ENST00000543239 PLEKHD1A6NEE1 506 aa26.3■■□□□ 1.8
CIT-212ENST00000543239 CASKIN1Q8WXD9 1431 aa26.26■■□□□ 1.79
CIT-212ENST00000543239 ATP1B4Q9UN42 357 aaPredicted RBP26.25■■□□□ 1.79
CIT-212ENST00000543239 PCF11O94913 1555 aaKnown RBP26.24■■□□□ 1.79
CIT-212ENST00000543239 CEP162Q5TB80 1403 aa26.22■■□□□ 1.79
CIT-212ENST00000543239 FYCO1Q9BQS8 1478 aa26.21■■□□□ 1.79
CIT-212ENST00000543239 CCDC18Q5T9S5 1454 aa26.19■■□□□ 1.78
CIT-212ENST00000543239 CDK11AQ9UQ88 783 aaPredicted RBP26.19■■□□□ 1.78
CIT-212ENST00000543239 LRRIQ1Q96JM4 1722 aa26.19■■□□□ 1.78
CIT-212ENST00000543239 COL17A1Q9UMD9 1497 aaPredicted RBP26.17■■□□□ 1.78
CIT-212ENST00000543239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.15■■□□□ 1.78
CIT-212ENST00000543239 LOC105371045A0A1W2PR82 267 aa26.14■■□□□ 1.78
CIT-212ENST00000543239 PHLDB1Q86UU1 1377 aa26.14■■□□□ 1.78
CIT-212ENST00000543239 TROQ12816 1431 aaPredicted RBP26.12■■□□□ 1.77
CIT-212ENST00000543239 TTC37Q6PGP7 1564 aa26.12■■□□□ 1.77
CIT-212ENST00000543239 NEO1Q92859 1461 aa26.11■■□□□ 1.77
CIT-212ENST00000543239 ARAP3Q8WWN8 1544 aa26.1■■□□□ 1.77
CIT-212ENST00000543239 KIF14Q15058 1648 aa26.08■■□□□ 1.77
CIT-212ENST00000543239 CFAP74Q9C0B2 1584 aa26.04■■□□□ 1.76
CIT-212ENST00000543239 FANCAO15360 1455 aa26.02■■□□□ 1.76
CIT-212ENST00000543239 PLCH2O75038 1416 aa26.01■■□□□ 1.75
CIT-212ENST00000543239 MYO5CQ9NQX4 1742 aa25.99■■□□□ 1.75
CIT-212ENST00000543239 AKNAQ7Z591 1439 aa25.97■■□□□ 1.75
CIT-212ENST00000543239 VPS8Q8N3P4 1428 aa25.93■■□□□ 1.74
CIT-212ENST00000543239 DENND4BO75064 1496 aaPredicted RBP25.91■■□□□ 1.74
CIT-212ENST00000543239 FRMPD1Q5SYB0 1578 aa25.9■■□□□ 1.74
CIT-212ENST00000543239 EFCAB2Q5VUJ9 269 aa25.89■■□□□ 1.74
CIT-212ENST00000543239 ADGRL1O94910 1474 aa25.88■■□□□ 1.73
CIT-212ENST00000543239 RAPGEF3O95398 923 aa25.88■■□□□ 1.73
CIT-212ENST00000543239 ARHGAP5Q13017 1502 aa25.88■■□□□ 1.73
CIT-212ENST00000543239 MTUS2Q5JR59 1369 aa25.87■■□□□ 1.73
CIT-212ENST00000543239 PREX2Q70Z35 1606 aa25.87■■□□□ 1.73
CIT-212ENST00000543239 RICTORQ6R327 1708 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms