RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CEP162Q5TB80 1403 aa17.12■□□□□ 0.33
DDB1-221ENST00000543162 NUP160Q12769 1436 aa17.09■□□□□ 0.33
DDB1-221ENST00000543162 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
DDB1-221ENST00000543162 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
DDB1-221ENST00000543162 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
DDB1-221ENST00000543162 CLIP1P30622 1438 aa17.06■□□□□ 0.32
DDB1-221ENST00000543162 IQGAP2Q13576 1575 aa17.06■□□□□ 0.32
DDB1-221ENST00000543162 EFCAB5A4FU69 1503 aa16.97■□□□□ 0.31
DDB1-221ENST00000543162 UGGT2Q9NYU1 1516 aa16.97■□□□□ 0.31
DDB1-221ENST00000543162 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
DDB1-221ENST00000543162 JPH4Q96JJ6 628 aa16.95■□□□□ 0.3
DDB1-221ENST00000543162 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
DDB1-221ENST00000543162 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
DDB1-221ENST00000543162 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
DDB1-221ENST00000543162 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
DDB1-221ENST00000543162 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
DDB1-221ENST00000543162 SHROOM2Q13796 1616 aa16.89■□□□□ 0.29
DDB1-221ENST00000543162 DISP1Q96F81 1524 aa16.89■□□□□ 0.29
DDB1-221ENST00000543162 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
DDB1-221ENST00000543162 CARMIL2Q6F5E8 1435 aa16.88■□□□□ 0.29
DDB1-221ENST00000543162 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
DDB1-221ENST00000543162 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
DDB1-221ENST00000543162 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
DDB1-221ENST00000543162 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
DDB1-221ENST00000543162 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
DDB1-221ENST00000543162 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.28
DDB1-221ENST00000543162 PCF11O94913 1555 aaKnown RBP16.75■□□□□ 0.27
DDB1-221ENST00000543162 PTPRGP23470 1445 aa16.74■□□□□ 0.27
DDB1-221ENST00000543162 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
DDB1-221ENST00000543162 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
DDB1-221ENST00000543162 APLP2Q06481 763 aa16.72■□□□□ 0.27
DDB1-221ENST00000543162 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
DDB1-221ENST00000543162 RAPGEF6Q8TEU7 1601 aa16.68■□□□□ 0.26
DDB1-221ENST00000543162 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
DDB1-221ENST00000543162 HECW1Q76N89 1606 aa16.67■□□□□ 0.26
DDB1-221ENST00000543162 ABCA8O94911 1581 aa16.66■□□□□ 0.26
DDB1-221ENST00000543162 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
DDB1-221ENST00000543162 UACAQ9BZF9 1416 aa16.63■□□□□ 0.25
DDB1-221ENST00000543162 MAP3K1Q13233 1512 aa16.63■□□□□ 0.25
DDB1-221ENST00000543162 NUP153P49790 1475 aaKnown RBP16.62■□□□□ 0.25
DDB1-221ENST00000543162 CCDC18Q5T9S5 1454 aa16.62■□□□□ 0.25
DDB1-221ENST00000543162 TIAM1Q13009 1591 aa16.62■□□□□ 0.25
DDB1-221ENST00000543162 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
DDB1-221ENST00000543162 CFAP43Q8NDM7 1665 aa16.61■□□□□ 0.25
DDB1-221ENST00000543162 LRRIQ1Q96JM4 1722 aa16.61■□□□□ 0.25
DDB1-221ENST00000543162 EPRSP07814 1512 aaKnown RBP16.6■□□□□ 0.25
DDB1-221ENST00000543162 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
DDB1-221ENST00000543162 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
DDB1-221ENST00000543162 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
DDB1-221ENST00000543162 ARID3CA6NKF2 412 aa16.59■□□□□ 0.25
DDB1-221ENST00000543162 ABCC2Q92887 1545 aa16.59■□□□□ 0.25
DDB1-221ENST00000543162 CDK13Q14004 1512 aaKnown RBP16.57■□□□□ 0.24
DDB1-221ENST00000543162 UHRF1BP1LA0JNW5 1464 aa16.57■□□□□ 0.24
DDB1-221ENST00000543162 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
DDB1-221ENST00000543162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
DDB1-221ENST00000543162 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
DDB1-221ENST00000543162 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
DDB1-221ENST00000543162 ATP10BO94823 1461 aa16.54■□□□□ 0.24
DDB1-221ENST00000543162 MTUS2Q5JR59 1369 aa16.52■□□□□ 0.24
DDB1-221ENST00000543162 ADCY10Q96PN6 1610 aa16.52■□□□□ 0.24
DDB1-221ENST00000543162 CDK11AQ9UQ88 783 aaPredicted RBP16.52■□□□□ 0.24
DDB1-221ENST00000543162 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
DDB1-221ENST00000543162 EHBP1L1Q8N3D4 1523 aa16.49■□□□□ 0.23
DDB1-221ENST00000543162 KDM5BQ9UGL1 1544 aa16.49■□□□□ 0.23
DDB1-221ENST00000543162 MAGI3Q5TCQ9 1506 aa16.48■□□□□ 0.23
DDB1-221ENST00000543162 ZCCHC11Q5TAX3 1644 aaKnown RBP16.48■□□□□ 0.23
DDB1-221ENST00000543162 PLEKHD1A6NEE1 506 aa16.46■□□□□ 0.23
DDB1-221ENST00000543162 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDB1-221ENST00000543162 TROQ12816 1431 aaPredicted RBP16.45■□□□□ 0.22
DDB1-221ENST00000543162 SUPT6HQ7KZ85 1726 aaKnown RBP16.43■□□□□ 0.22
DDB1-221ENST00000543162 NCOA2Q15596 1464 aa16.4■□□□□ 0.22
DDB1-221ENST00000543162 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
DDB1-221ENST00000543162 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
DDB1-221ENST00000543162 KIF14Q15058 1648 aa16.37■□□□□ 0.21
DDB1-221ENST00000543162 PHLDB1Q86UU1 1377 aa16.36■□□□□ 0.21
DDB1-221ENST00000543162 ASXL2Q76L83 1435 aa16.36■□□□□ 0.21
DDB1-221ENST00000543162 WDR7Q9Y4E6 1490 aa16.35■□□□□ 0.21
DDB1-221ENST00000543162 KCNH8Q96L42 1107 aa16.33■□□□□ 0.2
DDB1-221ENST00000543162 CCNB3Q8WWL7 1395 aa16.33■□□□□ 0.2
DDB1-221ENST00000543162 MYOM3Q5VTT5 1437 aa16.32■□□□□ 0.2
DDB1-221ENST00000543162 MAPKBP1O60336 1514 aa16.3■□□□□ 0.2
DDB1-221ENST00000543162 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
DDB1-221ENST00000543162 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
DDB1-221ENST00000543162 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
DDB1-221ENST00000543162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.28■□□□□ 0.23e-6■■■■□ 20
DDB1-221ENST00000543162 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.2
DDB1-221ENST00000543162 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
DDB1-221ENST00000543162 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
DDB1-221ENST00000543162 GPATCH8Q9UKJ3 1502 aaKnown RBP16.26■□□□□ 0.19
DDB1-221ENST00000543162 MIA2Q96PC5 1412 aa16.26■□□□□ 0.19
DDB1-221ENST00000543162 CDC42BPAQ5VT25 1732 aa16.25■□□□□ 0.19
DDB1-221ENST00000543162 FAM50AQ14320 339 aaKnown RBP16.24■□□□□ 0.19
DDB1-221ENST00000543162 CFDP1Q9UEE9 299 aaPredicted RBP16.24■□□□□ 0.19
DDB1-221ENST00000543162 ABCA9Q8IUA7 1624 aa16.23■□□□□ 0.19
DDB1-221ENST00000543162 MYO5CQ9NQX4 1742 aa16.23■□□□□ 0.19
DDB1-221ENST00000543162 PTPN23Q9H3S7 1636 aa16.23■□□□□ 0.19
DDB1-221ENST00000543162 PREX2Q70Z35 1606 aa16.22■□□□□ 0.19
DDB1-221ENST00000543162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.195e-11■■□□□ 11.4
DDB1-221ENST00000543162 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
DDB1-221ENST00000543162 PLCH2O75038 1416 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms