RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 JPH4Q96JJ6 628 aa34.4■■■■□ 3.1
CACNA1C-230ENST00000543114 IGF1RP08069 1367 aa34.39■■■■□ 3.1
CACNA1C-230ENST00000543114 KIAA0586Q9BVV6 1533 aa34.3■■■■□ 3.08
CACNA1C-230ENST00000543114 KIF13AQ9H1H9 1805 aa34.25■■■■□ 3.07
CACNA1C-230ENST00000543114 ADCY10Q96PN6 1610 aa34.18■■■■□ 3.06
CACNA1C-230ENST00000543114 CARMIL1Q5VZK9 1371 aa34.17■■■■□ 3.06
CACNA1C-230ENST00000543114 MAPKBP1O60336 1514 aa34.09■■■■□ 3.05
CACNA1C-230ENST00000543114 IQGAP2Q13576 1575 aa34.04■■■■□ 3.04
CACNA1C-230ENST00000543114 ABCC10Q5T3U5 1492 aa34.01■■■■□ 3.04
CACNA1C-230ENST00000543114 DIP2BQ9P265 1576 aa34.01■■■■□ 3.03
CACNA1C-230ENST00000543114 NPM1P06748 294 aaKnown RBP eCLIP33.97■■■■□ 3.03
CACNA1C-230ENST00000543114 PTPRGP23470 1445 aa33.93■■■■□ 3.02
CACNA1C-230ENST00000543114 CARMIL2Q6F5E8 1435 aa33.91■■■■□ 3.02
CACNA1C-230ENST00000543114 RAPGEF2Q9Y4G8 1499 aa33.9■■■■□ 3.02
CACNA1C-230ENST00000543114 FAM69CQ0P6D2 419 aa33.9■■■■□ 3.02
CACNA1C-230ENST00000543114 TNIKQ9UKE5 1360 aa33.88■■■■□ 3.01
CACNA1C-230ENST00000543114 DISP1Q96F81 1524 aa33.86■■■■□ 3.01
CACNA1C-230ENST00000543114 TTBK1Q5TCY1 1321 aaPredicted RBP33.83■■■■□ 3.01
CACNA1C-230ENST00000543114 ABCC2Q92887 1545 aa33.8■■■■□ 3
CACNA1C-230ENST00000543114 UGGT2Q9NYU1 1516 aa33.8■■■■□ 3
CACNA1C-230ENST00000543114 TSPOAP1O95153 1857 aa33.76■■■■□ 3
CACNA1C-230ENST00000543114 KIAA0556O60303 1618 aa33.75■■■□□ 2.99
CACNA1C-230ENST00000543114 AEBP2Q6ZN18 517 aaPredicted RBP33.74■■■□□ 2.99
CACNA1C-230ENST00000543114 UHRF1BP1LA0JNW5 1464 aa33.74■■■□□ 2.99
CACNA1C-230ENST00000543114 CTTNBP2Q8WZ74 1663 aa33.74■■■□□ 2.99
CACNA1C-230ENST00000543114 UACAQ9BZF9 1416 aa33.7■■■□□ 2.98
CACNA1C-230ENST00000543114 ASXL2Q76L83 1435 aa33.67■■■□□ 2.98
CACNA1C-230ENST00000543114 KDM6BO15054 1643 aa33.66■■■□□ 2.98
CACNA1C-230ENST00000543114 PLB1Q6P1J6 1458 aa33.63■■■□□ 2.97
CACNA1C-230ENST00000543114 KDM5BQ9UGL1 1544 aa33.59■■■□□ 2.97
CACNA1C-230ENST00000543114 PRXQ9BXM0 1461 aa33.59■■■□□ 2.97
CACNA1C-230ENST00000543114 GLI2P10070 1586 aa33.59■■■□□ 2.97
CACNA1C-230ENST00000543114 ZCCHC11Q5TAX3 1644 aaKnown RBP33.58■■■□□ 2.97
CACNA1C-230ENST00000543114 PPRC1Q5VV67 1664 aaKnown RBP33.58■■■□□ 2.97
CACNA1C-230ENST00000543114 GOLGA3Q08378 1498 aa33.48■■■□□ 2.95
CACNA1C-230ENST00000543114 EPRSP07814 1512 aaKnown RBP33.48■■■□□ 2.95
CACNA1C-230ENST00000543114 MAP3K4Q9Y6R4 1608 aa33.46■■■□□ 2.95
CACNA1C-230ENST00000543114 ABCA8O94911 1581 aa33.41■■■□□ 2.94
CACNA1C-230ENST00000543114 WDR7Q9Y4E6 1490 aa33.37■■■□□ 2.93
CACNA1C-230ENST00000543114 TEX14Q8IWB6 1497 aa33.27■■■□□ 2.92
CACNA1C-230ENST00000543114 COL17A1Q9UMD9 1497 aaPredicted RBP33.27■■■□□ 2.92
CACNA1C-230ENST00000543114 CSRNP3Q8WYN3 585 aa33.24■■■□□ 2.91
CACNA1C-230ENST00000543114 SAMD9Q5K651 1589 aa33.23■■■□□ 2.91
CACNA1C-230ENST00000543114 KDM4FA0A1W2PPD8 638 aa33.22■■■□□ 2.91
CACNA1C-230ENST00000543114 CFAP43Q8NDM7 1665 aa33.2■■■□□ 2.91
CACNA1C-230ENST00000543114 EEA1Q15075 1411 aa33.18■■■□□ 2.9
CACNA1C-230ENST00000543114 P3H3Q8IVL6 736 aa33.15■■■□□ 2.9
CACNA1C-230ENST00000543114 MAGI3Q5TCQ9 1506 aa33.12■■■□□ 2.89
CACNA1C-230ENST00000543114 CD109Q6YHK3 1445 aa33.11■■■□□ 2.89
CACNA1C-230ENST00000543114 KCNH8Q96L42 1107 aa33.08■■■□□ 2.89
CACNA1C-230ENST00000543114 ATP10BO94823 1461 aa33.07■■■□□ 2.88
CACNA1C-230ENST00000543114 RAPGEF6Q8TEU7 1601 aa33.07■■■□□ 2.88
CACNA1C-230ENST00000543114 ARID3CA6NKF2 412 aa33.06■■■□□ 2.88
CACNA1C-230ENST00000543114 ADGRL1O94910 1474 aa33.05■■■□□ 2.88
CACNA1C-230ENST00000543114 KIF21BO75037 1637 aa33■■■□□ 2.87
CACNA1C-230ENST00000543114 FAM9AQ8IZU1 332 aaPredicted RBP32.98■■■□□ 2.87
CACNA1C-230ENST00000543114 FHOD3Q2V2M9 1422 aa32.96■■■□□ 2.87
CACNA1C-230ENST00000543114 ABCA9Q8IUA7 1624 aa32.96■■■□□ 2.87
CACNA1C-230ENST00000543114 NUP153P49790 1475 aaKnown RBP32.93■■■□□ 2.86
CACNA1C-230ENST00000543114 RANGAP1P46060 587 aaPredicted RBP32.93■■■□□ 2.86
CACNA1C-230ENST00000543114 EFCAB5A4FU69 1503 aa32.87■■■□□ 2.85
CACNA1C-230ENST00000543114 ARAP3Q8WWN8 1544 aa32.85■■■□□ 2.85
CACNA1C-230ENST00000543114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.79■■■□□ 2.84
CACNA1C-230ENST00000543114 HNRNPUL2Q1KMD3 747 aaKnown RBP32.79■■■□□ 2.84
CACNA1C-230ENST00000543114 NEO1Q92859 1461 aa32.73■■■□□ 2.83
CACNA1C-230ENST00000543114 PHLDB1Q86UU1 1377 aa32.7■■■□□ 2.83
CACNA1C-230ENST00000543114 CHIC1Q5VXU3 224 aa32.69■■■□□ 2.82
CACNA1C-230ENST00000543114 FRMPD1Q5SYB0 1578 aa32.69■■■□□ 2.82
CACNA1C-230ENST00000543114 EHMT2Q96KQ7 1210 aa32.65■■■□□ 2.82
CACNA1C-230ENST00000543114 CDK13Q14004 1512 aaKnown RBP32.65■■■□□ 2.82
CACNA1C-230ENST00000543114 TTC37Q6PGP7 1564 aa32.63■■■□□ 2.81
CACNA1C-230ENST00000543114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.63■■■□□ 2.81
CACNA1C-230ENST00000543114 PLEKHD1A6NEE1 506 aa32.61■■■□□ 2.81
CACNA1C-230ENST00000543114 RAPGEF3O95398 923 aa32.61■■■□□ 2.81
CACNA1C-230ENST00000543114 HECW2Q9P2P5 1572 aa32.6■■■□□ 2.81
CACNA1C-230ENST00000543114 UBTFP17480 764 aaKnown RBP32.59■■■□□ 2.81
CACNA1C-230ENST00000543114 ARHGAP35Q9NRY4 1499 aa32.59■■■□□ 2.81
CACNA1C-230ENST00000543114 CFAP74Q9C0B2 1584 aa32.57■■■□□ 2.8
CACNA1C-230ENST00000543114 HECW1Q76N89 1606 aa32.55■■■□□ 2.8
CACNA1C-230ENST00000543114 RICTORQ6R327 1708 aa32.55■■■□□ 2.8
CACNA1C-230ENST00000543114 FANCAO15360 1455 aa32.53■■■□□ 2.8
CACNA1C-230ENST00000543114 FMN1Q68DA7 1419 aa32.52■■■□□ 2.8
CACNA1C-230ENST00000543114 ADAMTSL3P82987 1691 aa32.5■■■□□ 2.79
CACNA1C-230ENST00000543114 ARHGEF40Q8TER5 1519 aa32.5■■■□□ 2.79
CACNA1C-230ENST00000543114 AKNAQ7Z591 1439 aa32.49■■■□□ 2.79
CACNA1C-230ENST00000543114 DENND4BO75064 1496 aaPredicted RBP32.48■■■□□ 2.79
CACNA1C-230ENST00000543114 BCORL1Q5H9F3 1711 aa32.45■■■□□ 2.78
CACNA1C-230ENST00000543114 LRRIQ1Q96JM4 1722 aa32.41■■■□□ 2.78
CACNA1C-230ENST00000543114 ZMYM4Q5VZL5 1548 aa32.41■■■□□ 2.78
CACNA1C-230ENST00000543114 KIF14Q15058 1648 aa32.38■■■□□ 2.77
CACNA1C-230ENST00000543114 MADDQ8WXG6 1647 aa32.38■■■□□ 2.77
CACNA1C-230ENST00000543114 ATP1B4Q9UN42 357 aaPredicted RBP32.38■■■□□ 2.77
CACNA1C-230ENST00000543114 MYO5CQ9NQX4 1742 aa32.37■■■□□ 2.77
CACNA1C-230ENST00000543114 PTPRMP28827 1452 aa32.37■■■□□ 2.77
CACNA1C-230ENST00000543114 PLCH2O75038 1416 aa32.35■■■□□ 2.77
CACNA1C-230ENST00000543114 ZFYVE16Q7Z3T8 1539 aa32.32■■■□□ 2.76
CACNA1C-230ENST00000543114 SIGLEC1Q9BZZ2 1709 aa32.32■■■□□ 2.76
CACNA1C-230ENST00000543114 ARID4BQ4LE39 1312 aaPredicted RBP32.31■■■□□ 2.76
CACNA1C-230ENST00000543114 PCF11O94913 1555 aaKnown RBP32.3■■■□□ 2.76
CACNA1C-230ENST00000543114 POGZQ7Z3K3 1410 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms