RNA–Protein interactions for RNA: ENST00000542761.5

PTPN6-218, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-218ENST00000542761 PRG4Q92954 1404 aaPredicted RBP28.92■■■□□ 2.22
PTPN6-218ENST00000542761 JPH4Q96JJ6 628 aa28.91■■■□□ 2.22
PTPN6-218ENST00000542761 KIAA0586Q9BVV6 1533 aa28.86■■■□□ 2.21
PTPN6-218ENST00000542761 TRHP20396 242 aaPredicted RBP28.85■■■□□ 2.21
PTPN6-218ENST00000542761 RAPGEF2Q9Y4G8 1499 aa28.72■■■□□ 2.19
PTPN6-218ENST00000542761 IQGAP2Q13576 1575 aa28.69■■■□□ 2.18
PTPN6-218ENST00000542761 ADCY10Q96PN6 1610 aa28.57■■■□□ 2.16
PTPN6-218ENST00000542761 CARMIL2Q6F5E8 1435 aa28.56■■■□□ 2.16
PTPN6-218ENST00000542761 CTTNBP2Q8WZ74 1663 aa28.54■■■□□ 2.16
PTPN6-218ENST00000542761 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
PTPN6-218ENST00000542761 TTBK1Q5TCY1 1321 aaPredicted RBP28.52■■■□□ 2.16
PTPN6-218ENST00000542761 PTPRGP23470 1445 aa28.52■■■□□ 2.16
PTPN6-218ENST00000542761 DISP1Q96F81 1524 aa28.51■■■□□ 2.15
PTPN6-218ENST00000542761 TNIKQ9UKE5 1360 aa28.5■■■□□ 2.15
PTPN6-218ENST00000542761 UGGT2Q9NYU1 1516 aa28.5■■■□□ 2.15
PTPN6-218ENST00000542761 NPM1P06748 294 aaKnown RBP eCLIP28.45■■■□□ 2.14
PTPN6-218ENST00000542761 KIF13AQ9H1H9 1805 aa28.44■■■□□ 2.14
PTPN6-218ENST00000542761 KIAA0556O60303 1618 aa28.43■■■□□ 2.14
PTPN6-218ENST00000542761 MAPKBP1O60336 1514 aa28.42■■■□□ 2.14
PTPN6-218ENST00000542761 CSRNP3Q8WYN3 585 aa28.4■■■□□ 2.14
PTPN6-218ENST00000542761 EEA1Q15075 1411 aa28.36■■■□□ 2.13
PTPN6-218ENST00000542761 ABCC10Q5T3U5 1492 aa28.33■■■□□ 2.13
PTPN6-218ENST00000542761 UACAQ9BZF9 1416 aa28.32■■■□□ 2.12
PTPN6-218ENST00000542761 ABCC2Q92887 1545 aa28.32■■■□□ 2.12
PTPN6-218ENST00000542761 DIP2BQ9P265 1576 aa28.32■■■□□ 2.12
PTPN6-218ENST00000542761 UHRF1BP1LA0JNW5 1464 aa28.3■■■□□ 2.12
PTPN6-218ENST00000542761 FAM9AQ8IZU1 332 aaPredicted RBP28.3■■■□□ 2.12
PTPN6-218ENST00000542761 GOLGA3Q08378 1498 aa28.29■■■□□ 2.12
PTPN6-218ENST00000542761 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
PTPN6-218ENST00000542761 FAM69CQ0P6D2 419 aa28.27■■■□□ 2.12
PTPN6-218ENST00000542761 PLB1Q6P1J6 1458 aa28.18■■■□□ 2.1
PTPN6-218ENST00000542761 ZCCHC11Q5TAX3 1644 aaKnown RBP28.18■■■□□ 2.1
PTPN6-218ENST00000542761 KDM5BQ9UGL1 1544 aa28.18■■■□□ 2.1
PTPN6-218ENST00000542761 ASXL2Q76L83 1435 aa28.18■■■□□ 2.1
PTPN6-218ENST00000542761 KIF21BO75037 1637 aa28.16■■■□□ 2.1
PTPN6-218ENST00000542761 TSPOAP1O95153 1857 aa28.13■■■□□ 2.09
PTPN6-218ENST00000542761 ABCA8O94911 1581 aa28.13■■■□□ 2.09
PTPN6-218ENST00000542761 SAMD9Q5K651 1589 aa28.12■■■□□ 2.09
PTPN6-218ENST00000542761 P3H3Q8IVL6 736 aa28.12■■■□□ 2.09
PTPN6-218ENST00000542761 RANGAP1P46060 587 aaPredicted RBP28.05■■■□□ 2.08
PTPN6-218ENST00000542761 GLI2P10070 1586 aa28.04■■■□□ 2.08
PTPN6-218ENST00000542761 EPRSP07814 1512 aaKnown RBP28.02■■■□□ 2.08
PTPN6-218ENST00000542761 EHMT2Q96KQ7 1210 aa28■■■□□ 2.07
PTPN6-218ENST00000542761 WDR7Q9Y4E6 1490 aa27.98■■■□□ 2.07
PTPN6-218ENST00000542761 PPRC1Q5VV67 1664 aaKnown RBP27.97■■■□□ 2.07
PTPN6-218ENST00000542761 KDM6BO15054 1643 aa27.96■■■□□ 2.07
PTPN6-218ENST00000542761 FHOD3Q2V2M9 1422 aa27.95■■■□□ 2.07
PTPN6-218ENST00000542761 RAPGEF6Q8TEU7 1601 aa27.93■■■□□ 2.06
PTPN6-218ENST00000542761 MAP3K4Q9Y6R4 1608 aa27.93■■■□□ 2.06
PTPN6-218ENST00000542761 ARID3CA6NKF2 412 aa27.93■■■□□ 2.06
PTPN6-218ENST00000542761 EFCAB5A4FU69 1503 aa27.91■■■□□ 2.06
PTPN6-218ENST00000542761 UBTFP17480 764 aaKnown RBP27.9■■■□□ 2.06
PTPN6-218ENST00000542761 ATP10BO94823 1461 aa27.88■■■□□ 2.05
PTPN6-218ENST00000542761 KCNH8Q96L42 1107 aa27.84■■■□□ 2.05
PTPN6-218ENST00000542761 NUP153P49790 1475 aaKnown RBP27.81■■■□□ 2.04
PTPN6-218ENST00000542761 CFAP43Q8NDM7 1665 aa27.81■■■□□ 2.04
PTPN6-218ENST00000542761 TEX14Q8IWB6 1497 aa27.79■■■□□ 2.04
PTPN6-218ENST00000542761 CD109Q6YHK3 1445 aa27.75■■■□□ 2.03
PTPN6-218ENST00000542761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.74■■■□□ 2.03
PTPN6-218ENST00000542761 HNRNPUL2Q1KMD3 747 aaKnown RBP27.74■■■□□ 2.03
PTPN6-218ENST00000542761 ARHGAP35Q9NRY4 1499 aa27.73■■■□□ 2.03
PTPN6-218ENST00000542761 MAGI3Q5TCQ9 1506 aa27.71■■■□□ 2.03
PTPN6-218ENST00000542761 COL17A1Q9UMD9 1497 aaPredicted RBP27.7■■■□□ 2.03
PTPN6-218ENST00000542761 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
PTPN6-218ENST00000542761 AEBP2Q6ZN18 517 aaPredicted RBP27.64■■■□□ 2.02
PTPN6-218ENST00000542761 FMN1Q68DA7 1419 aa27.63■■■□□ 2.01
PTPN6-218ENST00000542761 CDK13Q14004 1512 aaKnown RBP27.62■■■□□ 2.01
PTPN6-218ENST00000542761 HECW1Q76N89 1606 aa27.59■■■□□ 2.01
PTPN6-218ENST00000542761 PLEKHD1A6NEE1 506 aa27.57■■■□□ 2
PTPN6-218ENST00000542761 ATP1B4Q9UN42 357 aaPredicted RBP27.55■■■□□ 2
PTPN6-218ENST00000542761 TTC37Q6PGP7 1564 aa27.48■■□□□ 1.99
PTPN6-218ENST00000542761 LRRIQ1Q96JM4 1722 aa27.47■■□□□ 1.99
PTPN6-218ENST00000542761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.47■■□□□ 1.99
PTPN6-218ENST00000542761 ARAP3Q8WWN8 1544 aa27.47■■□□□ 1.99
PTPN6-218ENST00000542761 PCF11O94913 1555 aaKnown RBP27.45■■□□□ 1.99
PTPN6-218ENST00000542761 NEO1Q92859 1461 aa27.44■■□□□ 1.98
PTPN6-218ENST00000542761 CLIP1P30622 1438 aa27.44■■□□□ 1.98
PTPN6-218ENST00000542761 KDM4FA0A1W2PPD8 638 aa27.43■■□□□ 1.98
PTPN6-218ENST00000542761 PHLDB1Q86UU1 1377 aa27.42■■□□□ 1.98
PTPN6-218ENST00000542761 CASKIN1Q8WXD9 1431 aa27.39■■□□□ 1.97
PTPN6-218ENST00000542761 CFAP74Q9C0B2 1584 aa27.36■■□□□ 1.97
PTPN6-218ENST00000542761 CDK11AQ9UQ88 783 aaPredicted RBP27.36■■□□□ 1.97
PTPN6-218ENST00000542761 KIF14Q15058 1648 aa27.36■■□□□ 1.97
PTPN6-218ENST00000542761 ADGRL1O94910 1474 aa27.36■■□□□ 1.97
PTPN6-218ENST00000542761 FANCAO15360 1455 aa27.35■■□□□ 1.97
PTPN6-218ENST00000542761 RAPGEF3O95398 923 aa27.34■■□□□ 1.97
PTPN6-218ENST00000542761 FRMPD1Q5SYB0 1578 aa27.34■■□□□ 1.97
PTPN6-218ENST00000542761 TROQ12816 1431 aaPredicted RBP27.33■■□□□ 1.97
PTPN6-218ENST00000542761 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
PTPN6-218ENST00000542761 FYCO1Q9BQS8 1478 aa27.32■■□□□ 1.96
PTPN6-218ENST00000542761 AKNAQ7Z591 1439 aa27.31■■□□□ 1.96
PTPN6-218ENST00000542761 MYO5CQ9NQX4 1742 aa27.3■■□□□ 1.96
PTPN6-218ENST00000542761 RICTORQ6R327 1708 aa27.27■■□□□ 1.96
PTPN6-218ENST00000542761 PLCH2O75038 1416 aa27.27■■□□□ 1.96
PTPN6-218ENST00000542761 DENND4BO75064 1496 aaPredicted RBP27.26■■□□□ 1.95
PTPN6-218ENST00000542761 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
PTPN6-218ENST00000542761 ARHGAP5Q13017 1502 aa27.17■■□□□ 1.94
PTPN6-218ENST00000542761 ARHGEF40Q8TER5 1519 aa27.17■■□□□ 1.94
PTPN6-218ENST00000542761 EFCAB2Q5VUJ9 269 aa27.16■■□□□ 1.94
PTPN6-218ENST00000542761 SCAPERQ9BY12 1400 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms