RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 ARHGAP35Q9NRY4 1499 aa21.16■□□□□ 0.98
CHFR-221ENST00000542714 CEP170Q5SW79 1584 aa21.15■□□□□ 0.98
CHFR-221ENST00000542714 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
CHFR-221ENST00000542714 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
CHFR-221ENST00000542714 IQGAP2Q13576 1575 aa21.13■□□□□ 0.97
CHFR-221ENST00000542714 NUP160Q12769 1436 aa21.11■□□□□ 0.97
CHFR-221ENST00000542714 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
CHFR-221ENST00000542714 SAMD9Q5K651 1589 aa21.1■□□□□ 0.97
CHFR-221ENST00000542714 EFCAB5A4FU69 1503 aa21.09■□□□□ 0.97
CHFR-221ENST00000542714 KIAA0586Q9BVV6 1533 aa21.08■□□□□ 0.96
CHFR-221ENST00000542714 VPS8Q8N3P4 1428 aa21.05■□□□□ 0.96
CHFR-221ENST00000542714 FBLN2P98095 1184 aa21.04■□□□□ 0.96
CHFR-221ENST00000542714 UGGT2Q9NYU1 1516 aa21.04■□□□□ 0.96
CHFR-221ENST00000542714 FHOD3Q2V2M9 1422 aa20.97■□□□□ 0.95
CHFR-221ENST00000542714 KIAA0556O60303 1618 aa20.94■□□□□ 0.94
CHFR-221ENST00000542714 DISP1Q96F81 1524 aa20.94■□□□□ 0.94
CHFR-221ENST00000542714 P3H3Q8IVL6 736 aa20.92■□□□□ 0.94
CHFR-221ENST00000542714 CLASP1Q7Z460 1538 aa20.91■□□□□ 0.94
CHFR-221ENST00000542714 SHROOM2Q13796 1616 aa20.9■□□□□ 0.94
CHFR-221ENST00000542714 PCF11O94913 1555 aaKnown RBP20.9■□□□□ 0.94
CHFR-221ENST00000542714 FMN1Q68DA7 1419 aa20.83■□□□□ 0.93
CHFR-221ENST00000542714 JPH4Q96JJ6 628 aa20.82■□□□□ 0.92
CHFR-221ENST00000542714 FYCO1Q9BQS8 1478 aa20.81■□□□□ 0.92
CHFR-221ENST00000542714 CASKIN1Q8WXD9 1431 aa20.81■□□□□ 0.92
CHFR-221ENST00000542714 LRRIQ1Q96JM4 1722 aa20.81■□□□□ 0.92
CHFR-221ENST00000542714 CFAP43Q8NDM7 1665 aa20.8■□□□□ 0.92
CHFR-221ENST00000542714 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.92
CHFR-221ENST00000542714 CARMIL2Q6F5E8 1435 aa20.77■□□□□ 0.91
CHFR-221ENST00000542714 PRG4Q92954 1404 aaPredicted RBP20.77■□□□□ 0.91
CHFR-221ENST00000542714 TIAM1Q13009 1591 aa20.76■□□□□ 0.91
CHFR-221ENST00000542714 MAP3K1Q13233 1512 aa20.75■□□□□ 0.91
CHFR-221ENST00000542714 ERCC6L2Q5T890 1561 aa20.75■□□□□ 0.91
CHFR-221ENST00000542714 HECW1Q76N89 1606 aa20.71■□□□□ 0.91
CHFR-221ENST00000542714 RAPGEF6Q8TEU7 1601 aa20.71■□□□□ 0.91
CHFR-221ENST00000542714 APLP2Q06481 763 aa20.68■□□□□ 0.9
CHFR-221ENST00000542714 ABCA8O94911 1581 aa20.65■□□□□ 0.9
CHFR-221ENST00000542714 KANK4Q5T7N3 995 aaPredicted RBP20.65■□□□□ 0.9
CHFR-221ENST00000542714 PLB1Q6P1J6 1458 aa20.63■□□□□ 0.89
CHFR-221ENST00000542714 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
CHFR-221ENST00000542714 OSCARQ8IYS5 282 aa20.63■□□□□ 0.89
CHFR-221ENST00000542714 NUP153P49790 1475 aaKnown RBP20.62■□□□□ 0.89
CHFR-221ENST00000542714 CCDC18Q5T9S5 1454 aa20.62■□□□□ 0.89
CHFR-221ENST00000542714 LRRC9Q6ZRR7 1453 aa20.62■□□□□ 0.89
CHFR-221ENST00000542714 ATP1B4Q9UN42 357 aaPredicted RBP20.61■□□□□ 0.89
CHFR-221ENST00000542714 EPRSP07814 1512 aaKnown RBP20.61■□□□□ 0.89
CHFR-221ENST00000542714 CDK13Q14004 1512 aaKnown RBP20.6■□□□□ 0.89
CHFR-221ENST00000542714 TRIM26Q12899 539 aaPredicted RBP20.59■□□□□ 0.89
CHFR-221ENST00000542714 PTPRGP23470 1445 aa20.59■□□□□ 0.89
CHFR-221ENST00000542714 MAGI3Q5TCQ9 1506 aa20.57■□□□□ 0.88
CHFR-221ENST00000542714 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
CHFR-221ENST00000542714 PCGF6Q9BYE7 350 aa20.51■□□□□ 0.87
CHFR-221ENST00000542714 UACAQ9BZF9 1416 aa20.5■□□□□ 0.87
CHFR-221ENST00000542714 ABCC2Q92887 1545 aa20.49■□□□□ 0.87
CHFR-221ENST00000542714 ARID3CA6NKF2 412 aa20.47■□□□□ 0.87
CHFR-221ENST00000542714 SUPT6HQ7KZ85 1726 aaKnown RBP20.47■□□□□ 0.87
CHFR-221ENST00000542714 UHRF1BP1LA0JNW5 1464 aa20.45■□□□□ 0.86
CHFR-221ENST00000542714 ATP10BO94823 1461 aa20.45■□□□□ 0.86
CHFR-221ENST00000542714 MTUS2Q5JR59 1369 aa20.45■□□□□ 0.86
CHFR-221ENST00000542714 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
CHFR-221ENST00000542714 PHLDB1Q86UU1 1377 aa20.42■□□□□ 0.86
CHFR-221ENST00000542714 ADCY10Q96PN6 1610 aa20.42■□□□□ 0.86
CHFR-221ENST00000542714 NCOA2Q15596 1464 aa20.41■□□□□ 0.86
CHFR-221ENST00000542714 RRBP1Q9P2E9 1410 aaKnown RBP20.4■□□□□ 0.86
CHFR-221ENST00000542714 ZCCHC11Q5TAX3 1644 aaKnown RBP20.39■□□□□ 0.86
CHFR-221ENST00000542714 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
CHFR-221ENST00000542714 RIMBP3CA6NJZ7 1639 aa20.36■□□□□ 0.85
CHFR-221ENST00000542714 RIMBP3BA6NNM3 1639 aa20.36■□□□□ 0.85
CHFR-221ENST00000542714 KIF14Q15058 1648 aa20.36■□□□□ 0.85
CHFR-221ENST00000542714 RIMBP3Q9UFD9 1639 aa20.36■□□□□ 0.85
CHFR-221ENST00000542714 KDM5BQ9UGL1 1544 aa20.36■□□□□ 0.85
CHFR-221ENST00000542714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.85
CHFR-221ENST00000542714 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.85
CHFR-221ENST00000542714 CDK11AQ9UQ88 783 aaPredicted RBP20.31■□□□□ 0.84
CHFR-221ENST00000542714 MYOM3Q5VTT5 1437 aa20.3■□□□□ 0.84
CHFR-221ENST00000542714 CCNB3Q8WWL7 1395 aa20.3■□□□□ 0.84
CHFR-221ENST00000542714 FGD6Q6ZV73 1430 aa20.28■□□□□ 0.84
CHFR-221ENST00000542714 ABCC10Q5T3U5 1492 aa20.26■□□□□ 0.83
CHFR-221ENST00000542714 PLEKHD1A6NEE1 506 aa20.25■□□□□ 0.83
CHFR-221ENST00000542714 ITSN2Q9NZM3 1697 aa20.25■□□□□ 0.83
CHFR-221ENST00000542714 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
CHFR-221ENST00000542714 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
CHFR-221ENST00000542714 TCOF1Q13428 1488 aaKnown RBP20.21■□□□□ 0.83
CHFR-221ENST00000542714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.21■□□□□ 0.83
CHFR-221ENST00000542714 TTC37Q6PGP7 1564 aa20.2■□□□□ 0.82
CHFR-221ENST00000542714 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
CHFR-221ENST00000542714 MIA2Q96PC5 1412 aa20.19■□□□□ 0.82
CHFR-221ENST00000542714 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHFR-221ENST00000542714 PREX2Q70Z35 1606 aa20.16■□□□□ 0.82
CHFR-221ENST00000542714 WDR7Q9Y4E6 1490 aa20.16■□□□□ 0.82
CHFR-221ENST00000542714 CDC42BPBQ9Y5S2 1711 aa20.16■□□□□ 0.82
CHFR-221ENST00000542714 MYO5CQ9NQX4 1742 aa20.13■□□□□ 0.81
CHFR-221ENST00000542714 FAM50AQ14320 339 aaKnown RBP20.13■□□□□ 0.81
CHFR-221ENST00000542714 ASXL2Q76L83 1435 aa20.12■□□□□ 0.81
CHFR-221ENST00000542714 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
CHFR-221ENST00000542714 CAMSAP2Q08AD1 1489 aa20.09■□□□□ 0.81
CHFR-221ENST00000542714 ABCA9Q8IUA7 1624 aa20.08■□□□□ 0.8
CHFR-221ENST00000542714 DNMT1P26358 1616 aaKnown RBP20.07■□□□□ 0.8
CHFR-221ENST00000542714 PTPRKQ15262 1439 aa20.07■□□□□ 0.8
CHFR-221ENST00000542714 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
CHFR-221ENST00000542714 MAPKBP1O60336 1514 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms